RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 C12orf74Q32Q52 190 aa8.49□□□□□ -1.05
CLDN4-202ENST00000431918 CEND1Q8N111 149 aa8.49□□□□□ -1.05
CLDN4-202ENST00000431918 CITED2Q99967 270 aaPredicted RBP8.49□□□□□ -1.05
CLDN4-202ENST00000431918 KLLNB2CW77 178 aa8.48□□□□□ -1.05
CLDN4-202ENST00000431918 SPXQ9BT56 116 aa8.48□□□□□ -1.05
CLDN4-202ENST00000431918 PMVKQ15126 192 aa8.48□□□□□ -1.05
CLDN4-202ENST00000431918 BAALCQ8WXS3 180 aa8.48□□□□□ -1.05
CLDN4-202ENST00000431918 PSMG3-AS1Q96PY0 264 aa8.48□□□□□ -1.05
CLDN4-202ENST00000431918 E9PLD3 99 aa8.47□□□□□ -1.05
CLDN4-202ENST00000431918 FGF6P10767 208 aa8.47□□□□□ -1.05
CLDN4-202ENST00000431918 PAPPA-AS1Q5QFB9 102 aa8.47□□□□□ -1.05
CLDN4-202ENST00000431918 I3L3M4 83 aa8.47□□□□□ -1.05
CLDN4-202ENST00000431918 MED14OSP0DP75 135 aa8.47□□□□□ -1.05
CLDN4-202ENST00000431918 PROK1P58294 105 aa8.47□□□□□ -1.05
CLDN4-202ENST00000431918 TOMM6Q96B49 74 aa8.47□□□□□ -1.05
CLDN4-202ENST00000431918 NDUFV3P56181 108 aaKnown RBP8.46□□□□□ -1.05
CLDN4-202ENST00000431918 LGALS9O00182 355 aa8.46□□□□□ -1.06
CLDN4-202ENST00000431918 MAP6D1Q9H9H5 199 aa8.46□□□□□ -1.06
CLDN4-202ENST00000431918 IGHV4-4A0A075B6R2 117 aa8.46□□□□□ -1.06
CLDN4-202ENST00000431918 TRAV2A0A0B4J234 112 aa8.46□□□□□ -1.06
CLDN4-202ENST00000431918 A0A0U1RRA0 63 aa8.46□□□□□ -1.06
CLDN4-202ENST00000431918 H3BMM0 161 aa8.46□□□□□ -1.06
CLDN4-202ENST00000431918 LRRC75A-AS1Q8N1F1 130 aa8.46□□□□□ -1.06
CLDN4-202ENST00000431918 C4orf3Q8WVX3 66 aa8.46□□□□□ -1.06
CLDN4-202ENST00000431918 MYMXA0A1B0GTQ4 84 aa8.45□□□□□ -1.06
CLDN4-202ENST00000431918 TM2D2Q9BX73 214 aa8.45□□□□□ -1.06
CLDN4-202ENST00000431918 CDIP1Q9H305 208 aa8.45□□□□□ -1.06
CLDN4-202ENST00000431918 CELSR2Q9HCU4 2923 aa8.45□□□□□ -1.06
CLDN4-202ENST00000431918 M0R2P5 195 aa8.45□□□□□ -1.06
CLDN4-202ENST00000431918 MAPKAPK5-AS1Q8N8E1 139 aa8.45□□□□□ -1.06
CLDN4-202ENST00000431918 C11orf86A6NJI1 115 aa8.44□□□□□ -1.06
CLDN4-202ENST00000431918 NPC2P61916 151 aa8.44□□□□□ -1.06
CLDN4-202ENST00000431918 CEMP1Q6PRD7 247 aaPredicted RBP8.44□□□□□ -1.06
CLDN4-202ENST00000431918 ZNRF2Q8NHG8 242 aa8.44□□□□□ -1.06
CLDN4-202ENST00000431918 PPDPFQ9H3Y8 114 aa8.44□□□□□ -1.06
CLDN4-202ENST00000431918 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.44□□□□□ -1.06
CLDN4-202ENST00000431918 IGKV2-29A2NJV5 120 aaPredicted RBP8.44□□□□□ -1.06
CLDN4-202ENST00000431918 ADARB2-AS1A8MUL3 147 aa8.44□□□□□ -1.06
CLDN4-202ENST00000431918 UBE2L6O14933 153 aa8.44□□□□□ -1.06
CLDN4-202ENST00000431918 KLK9Q2XQG4 91 aa8.44□□□□□ -1.06
CLDN4-202ENST00000431918 C5orf47Q569G3 176 aa8.44□□□□□ -1.06
CLDN4-202ENST00000431918 BRI3O95415 125 aa8.44□□□□□ -1.06
CLDN4-202ENST00000431918 MRPL23Q16540 153 aaKnown RBP8.44□□□□□ -1.06
CLDN4-202ENST00000431918 DEFB114Q30KQ6 69 aa8.44□□□□□ -1.06
CLDN4-202ENST00000431918 C10orf126Q8N4M7 172 aa8.44□□□□□ -1.06
CLDN4-202ENST00000431918 MUC4Q99102 2169 aa8.44□□□□□ -1.06
CLDN4-202ENST00000431918 IGLV2-18A0A075B6J9 118 aa8.44□□□□□ -1.06
CLDN4-202ENST00000431918 TRGV4A0A0C4DH28 118 aa8.43□□□□□ -1.06
CLDN4-202ENST00000431918 A0A0J9YXV3 536 aa8.43□□□□□ -1.06
CLDN4-202ENST00000431918 TMEM141Q96I45 108 aa8.43□□□□□ -1.06
CLDN4-202ENST00000431918 SMR3AQ99954 134 aa8.43□□□□□ -1.06
CLDN4-202ENST00000431918 LINC01549A6NIU2 74 aa8.42□□□□□ -1.06
CLDN4-202ENST00000431918 HHLA3Q9XRX5 114 aa8.42□□□□□ -1.06
CLDN4-202ENST00000431918 TEN1Q86WV5 123 aa8.42□□□□□ -1.06
CLDN4-202ENST00000431918 DEFB130BP0DP73 79 aa8.42□□□□□ -1.06
CLDN4-202ENST00000431918 DEFB130AP0DP74 79 aa8.42□□□□□ -1.06
CLDN4-202ENST00000431918 NOP10Q9NPE3 64 aaKnown RBP8.42□□□□□ -1.06
CLDN4-202ENST00000431918 TRAV13-1A0A0B4J241 112 aa8.41□□□□□ -1.06
CLDN4-202ENST00000431918 M0QY20 66 aa8.41□□□□□ -1.06
CLDN4-202ENST00000431918 CRYGDP07320 174 aa8.41□□□□□ -1.06
CLDN4-202ENST00000431918 RPL36AP83881 106 aaKnown RBP8.41□□□□□ -1.06
CLDN4-202ENST00000431918 ZNF575Q86XF7 245 aa8.41□□□□□ -1.06
CLDN4-202ENST00000431918 NEXN-AS1Q8NBZ9 246 aa8.41□□□□□ -1.06
CLDN4-202ENST00000431918 RPL36ALQ969Q0 106 aaKnown RBP8.41□□□□□ -1.06
CLDN4-202ENST00000431918 WFDC10AQ9H1F0 79 aa8.41□□□□□ -1.06
CLDN4-202ENST00000431918 TRAV12-1A0A0B4J245 112 aa8.41□□□□□ -1.06
CLDN4-202ENST00000431918 ATP6V0E2Q8NHE4 81 aa8.41□□□□□ -1.06
CLDN4-202ENST00000431918 SPANXA1Q9NS26 97 aa8.41□□□□□ -1.06
CLDN4-202ENST00000431918 ODF3Q96PU9 254 aa8.4□□□□□ -1.06
CLDN4-202ENST00000431918 HIGD1BQ9P298 99 aa8.4□□□□□ -1.06
CLDN4-202ENST00000431918 A0A096LNT2 108 aa8.4□□□□□ -1.06
CLDN4-202ENST00000431918 RHODO00212 210 aa8.4□□□□□ -1.06
CLDN4-202ENST00000431918 ZNF625Q96I27 306 aaPredicted RBP8.4□□□□□ -1.07
CLDN4-202ENST00000431918 J3QQQ9 107 aa8.39□□□□□ -1.07
CLDN4-202ENST00000431918 C9orf85Q96MD7 179 aa8.39□□□□□ -1.07
CLDN4-202ENST00000431918 TOMM7Q9P0U1 55 aa8.39□□□□□ -1.07
CLDN4-202ENST00000431918 TRAV8-4A0A0B4J246 113 aa8.39□□□□□ -1.07
CLDN4-202ENST00000431918 POLR2KP53803 58 aaKnown RBP8.39□□□□□ -1.07
CLDN4-202ENST00000431918 RHOHQ15669 191 aa8.39□□□□□ -1.07
CLDN4-202ENST00000431918 C9orf153Q5TBE3 101 aa8.39□□□□□ -1.07
CLDN4-202ENST00000431918 NFE4Q86UQ8 179 aa8.39□□□□□ -1.07
CLDN4-202ENST00000431918 TIMM21Q9BVV7 248 aa8.39□□□□□ -1.07
CLDN4-202ENST00000431918 LINC01006Q8NI28 216 aa8.39□□□□□ -1.07
CLDN4-202ENST00000431918 ZNF580Q9UK33 172 aa8.39□□□□□ -1.07
CLDN4-202ENST00000431918 C9JAW5 83 aa8.38□□□□□ -1.07
CLDN4-202ENST00000431918 C15orf53Q8NAA6 179 aa8.38□□□□□ -1.07
CLDN4-202ENST00000431918 C20orf203Q8NBC4 194 aa8.38□□□□□ -1.07
CLDN4-202ENST00000431918 TRAV4A0A0B4J268 109 aa8.38□□□□□ -1.07
CLDN4-202ENST00000431918 OR13C6PQ8NH95 151 aa8.38□□□□□ -1.07
CLDN4-202ENST00000431918 HTN3P15516 51 aa8.38□□□□□ -1.07
CLDN4-202ENST00000431918 FAM19A4Q96LR4 140 aa8.38□□□□□ -1.07
CLDN4-202ENST00000431918 ESM1Q9NQ30 184 aa8.38□□□□□ -1.07
CLDN4-202ENST00000431918 TMEM86BQ8N661 226 aa8.37□□□□□ -1.07
CLDN4-202ENST00000431918 ANKRD29Q8N6D5 301 aa8.37□□□□□ -1.07
CLDN4-202ENST00000431918 PLEKHB2Q96CS7 222 aa8.37□□□□□ -1.07
CLDN4-202ENST00000431918 TMEM126AQ9H061 195 aa8.37□□□□□ -1.07
CLDN4-202ENST00000431918 ITPR2Q14571 2701 aa8.37□□□□□ -1.07
CLDN4-202ENST00000431918 RBMY1A1P0DJD3 496 aaKnown RBP8.37□□□□□ -1.07
CLDN4-202ENST00000431918 RBMY1CP0DJD4 496 aa8.37□□□□□ -1.07
CLDN4-202ENST00000431918 RBMY1FQ15415 496 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms