RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 UBE2D2P62837 147 aa12.63□□□□□ -0.39
RIF1-204ENST00000430328 CCDC179H3BU77 68 aa12.62□□□□□ -0.39
RIF1-204ENST00000430328 IL17DQ8TAD2 202 aa12.62□□□□□ -0.39
RIF1-204ENST00000430328 ABCA2Q9BZC7 2435 aa12.62□□□□□ -0.39
RIF1-204ENST00000430328 LINC00269Q8N2A0 174 aa12.62□□□□□ -0.39
RIF1-204ENST00000430328 DEFB135Q30KP9 77 aa12.62□□□□□ -0.39
RIF1-204ENST00000430328 TMEM105Q8N8V8 129 aa12.62□□□□□ -0.39
RIF1-204ENST00000430328 PLA2G2AP14555 144 aa12.62□□□□□ -0.39
RIF1-204ENST00000430328 TRBV7-6A0A0J9YX20 115 aa12.61□□□□□ -0.39
RIF1-204ENST00000430328 C20orf203Q8NBC4 194 aa12.61□□□□□ -0.39
RIF1-204ENST00000430328 AJUBAQ96IF1 538 aa12.61□□□□□ -0.39
RIF1-204ENST00000430328 KAAG1Q9UBP8 84 aa12.61□□□□□ -0.39
RIF1-204ENST00000430328 UBE2D3P61077 147 aa12.61□□□□□ -0.39
RIF1-204ENST00000430328 ZNF106Q9H2Y7 1883 aaKnown RBP12.61□□□□□ -0.39
RIF1-204ENST00000430328 C7orf33Q8WU49 177 aa12.61□□□□□ -0.39
RIF1-204ENST00000430328 Q6ZR03 302 aa12.6□□□□□ -0.39
RIF1-204ENST00000430328 TRBV30A0A0K0K1B3 111 aa12.6□□□□□ -0.39
RIF1-204ENST00000430328 EBI3Q14213 229 aa12.6□□□□□ -0.39
RIF1-204ENST00000430328 TRIAP1O43715 76 aa12.6□□□□□ -0.39
RIF1-204ENST00000430328 REG3AQ06141 175 aa12.6□□□□□ -0.39
RIF1-204ENST00000430328 CSDC2Q9Y534 153 aaKnown RBP12.6□□□□□ -0.39
RIF1-204ENST00000430328 ZNF706Q9Y5V0 76 aaPredicted RBP12.6□□□□□ -0.39
RIF1-204ENST00000430328 THSD7AQ9UPZ6 1657 aa12.6□□□□□ -0.39
RIF1-204ENST00000430328 PCNX3Q9H6A9 2034 aa12.59□□□□□ -0.39
RIF1-204ENST00000430328 KIF26AQ9ULI4 1882 aaPredicted RBP12.59□□□□□ -0.39
RIF1-204ENST00000430328 Q6Q795 121 aa12.59□□□□□ -0.39
RIF1-204ENST00000430328 GPR179Q6PRD1 2367 aa12.59□□□□□ -0.39
RIF1-204ENST00000430328 IBA57-AS1B1ANH7 110 aa12.59□□□□□ -0.39
RIF1-204ENST00000430328 SOSTDC1Q6X4U4 206 aa12.59□□□□□ -0.39
RIF1-204ENST00000430328 NUP210LQ5VU65 1888 aa12.58□□□□□ -0.39
RIF1-204ENST00000430328 NANOS2P60321 138 aaKnown RBP12.58□□□□□ -0.4
RIF1-204ENST00000430328 SMIM9A6NGZ8 99 aa12.58□□□□□ -0.4
RIF1-204ENST00000430328 I3L2K1 104 aa12.58□□□□□ -0.4
RIF1-204ENST00000430328 MYO18BQ8IUG5 2567 aa12.58□□□□□ -0.4
RIF1-204ENST00000430328 DEFB4AO15263 64 aa12.58□□□□□ -0.4
RIF1-204ENST00000430328 H7C423 109 aa12.57□□□□□ -0.4
RIF1-204ENST00000430328 TRAV7A0A075B6U4 112 aa12.57□□□□□ -0.4
RIF1-204ENST00000430328 K7EIM0 57 aa12.57□□□□□ -0.4
RIF1-204ENST00000430328 IGLV11-55A0A075B6I3 123 aa12.57□□□□□ -0.4
RIF1-204ENST00000430328 CRYGDP07320 174 aa12.56□□□□□ -0.4
RIF1-204ENST00000430328 MGAMO43451 1857 aa12.56□□□□□ -0.4
RIF1-204ENST00000430328 SLX1AQ9BQ83 275 aa12.56□□□□□ -0.4
RIF1-204ENST00000430328 DHRS4-AS1Q9P1J3 65 aa12.56□□□□□ -0.4
RIF1-204ENST00000430328 MRPS12O15235 138 aaKnown RBP12.55□□□□□ -0.4
RIF1-204ENST00000430328 CUL9Q8IWT3 2517 aa12.55□□□□□ -0.4
RIF1-204ENST00000430328 LINC00308Q8TCZ7 52 aa12.55□□□□□ -0.4
RIF1-204ENST00000430328 PSPHP1O15172 72 aa12.55□□□□□ -0.4
RIF1-204ENST00000430328 CEMP1Q6PRD7 247 aaPredicted RBP12.55□□□□□ -0.4
RIF1-204ENST00000430328 SMAD5-AS1Q9Y6J3 95 aa12.55□□□□□ -0.4
RIF1-204ENST00000430328 CCDC168Q8NDH2 2452 aa12.55□□□□□ -0.4
RIF1-204ENST00000430328 IGHV7-81A0A0B4J1V7 117 aa12.54□□□□□ -0.4
RIF1-204ENST00000430328 K7ENP7 123 aa12.54□□□□□ -0.4
RIF1-204ENST00000430328 FAM19A5Q7Z5A7 132 aaPredicted RBP12.54□□□□□ -0.4
RIF1-204ENST00000430328 X6R8D5 127 aa12.54□□□□□ -0.4
RIF1-204ENST00000430328 CHCHD10Q8WYQ3 142 aaPredicted RBP12.54□□□□□ -0.4
RIF1-204ENST00000430328 K7EMT4 169 aa12.54□□□□□ -0.4
RIF1-204ENST00000430328 C22orf34Q6ZV56 151 aa12.54□□□□□ -0.4
RIF1-204ENST00000430328 C6orf99Q4VX62 202 aa12.54□□□□□ -0.4
RIF1-204ENST00000430328 TTC28Q96AY4 2481 aa12.53□□□□□ -0.4
RIF1-204ENST00000430328 C11orf45Q8TAV5 145 aa12.53□□□□□ -0.4
RIF1-204ENST00000430328 HIVEP2P31629 2446 aa12.53□□□□□ -0.4
RIF1-204ENST00000430328 NHSL1Q5SYE7 1610 aa12.53□□□□□ -0.4
RIF1-204ENST00000430328 TRBV6-5A0A0K0K1A5 114 aa12.53□□□□□ -0.4
RIF1-204ENST00000430328 VWCEQ96DN2 955 aa12.53□□□□□ -0.4
RIF1-204ENST00000430328 CFAP126Q5VTH2 177 aa12.52□□□□□ -0.4
RIF1-204ENST00000430328 XAGE1AQ9HD64 81 aa12.52□□□□□ -0.4
RIF1-204ENST00000430328 C1orf147Q96MC9 270 aaPredicted RBP12.52□□□□□ -0.4
RIF1-204ENST00000430328 IGLV1-44P01699 117 aa12.52□□□□□ -0.41
RIF1-204ENST00000430328 FAM167A-AS1Q96KT0 104 aa12.51□□□□□ -0.41
RIF1-204ENST00000430328 IGF1P05019 195 aa12.51□□□□□ -0.41
RIF1-204ENST00000430328 DCANP1Q8TF63 244 aa12.51□□□□□ -0.41
RIF1-204ENST00000430328 PRAC2D3DTV9 90 aa12.51□□□□□ -0.41
RIF1-204ENST00000430328 C2CD3Q4AC94 2353 aa12.5□□□□□ -0.41
RIF1-204ENST00000430328 NRACQ8N912 160 aa12.5□□□□□ -0.41
RIF1-204ENST00000430328 C5orf56Q8N8D9 126 aa12.49□□□□□ -0.41
RIF1-204ENST00000430328 POM121L12Q8N7R1 296 aa12.49□□□□□ -0.41
RIF1-204ENST00000430328 C4orf3Q8WVX3 66 aa12.49□□□□□ -0.41
RIF1-204ENST00000430328 LINC00467Q9BRT7 94 aa12.49□□□□□ -0.41
RIF1-204ENST00000430328 LINC00208Q96KT6 92 aa12.49□□□□□ -0.41
RIF1-204ENST00000430328 CLUHP3Q96NS8 147 aa12.49□□□□□ -0.41
RIF1-204ENST00000430328 Q8N976 141 aa12.49□□□□□ -0.41
RIF1-204ENST00000430328 LY6LH3BQJ8 138 aa12.48□□□□□ -0.41
RIF1-204ENST00000430328 IGKV2-28A0A075B6P5 120 aa12.48□□□□□ -0.41
RIF1-204ENST00000430328 IGKV2D-28P01615 120 aa12.48□□□□□ -0.41
RIF1-204ENST00000430328 CDKN2A-AS1Q9UH64 79 aa12.48□□□□□ -0.41
RIF1-204ENST00000430328 TANC1Q9C0D5 1861 aa12.48□□□□□ -0.41
RIF1-204ENST00000430328 PRSS33Q8NF86 280 aa12.48□□□□□ -0.41
RIF1-204ENST00000430328 CEP192Q8TEP8 1941 aa12.48□□□□□ -0.41
RIF1-204ENST00000430328 A0A1B0GXF2 115 aa12.48□□□□□ -0.41
RIF1-204ENST00000430328 INSL3P51460 131 aa12.47□□□□□ -0.41
RIF1-204ENST00000430328 PPDPFQ9H3Y8 114 aa12.47□□□□□ -0.41
RIF1-204ENST00000430328 CELA1Q9UNI1 258 aa12.47□□□□□ -0.41
RIF1-204ENST00000430328 ESRGQ1W209 222 aa12.47□□□□□ -0.41
RIF1-204ENST00000430328 IGLV9-49A0A0B4J1Y8 123 aa12.46□□□□□ -0.41
RIF1-204ENST00000430328 NEXN-AS1Q8NBZ9 246 aa12.46□□□□□ -0.41
RIF1-204ENST00000430328 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.46□□□□□ -0.41
RIF1-204ENST00000430328 C10orf25Q5T742 122 aa12.46□□□□□ -0.41
RIF1-204ENST00000430328 RNF185Q96GF1 192 aa12.46□□□□□ -0.41
RIF1-204ENST00000430328 Q6ZQY7 126 aa12.46□□□□□ -0.42
RIF1-204ENST00000430328 ALPK3Q96L96 1907 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms