RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 CDPF1Q6NVV7 123 aa11.52□□□□□ -0.57
CTSD-203ENST00000429746 KRTAP26-1Q6PEX3 210 aa11.52□□□□□ -0.57
CTSD-203ENST00000429746 C20orf203Q8NBC4 194 aa11.52□□□□□ -0.57
CTSD-203ENST00000429746 TMEM70Q9BUB7 260 aa11.52□□□□□ -0.57
CTSD-203ENST00000429746 NCR2O95944 276 aa11.51□□□□□ -0.57
CTSD-203ENST00000429746 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.51□□□□□ -0.57
CTSD-203ENST00000429746 UBE2WQ96B02 151 aa11.51□□□□□ -0.57
CTSD-203ENST00000429746 MRAP2Q96G30 205 aa11.51□□□□□ -0.57
CTSD-203ENST00000429746 URGCP-MRPS24S4R325 110 aa11.51□□□□□ -0.57
CTSD-203ENST00000429746 IGLV4-60A0A075B6I1 120 aa11.5□□□□□ -0.57
CTSD-203ENST00000429746 LINC00862A6NCI5 91 aa11.5□□□□□ -0.57
CTSD-203ENST00000429746 TMEM262E9PQX1 116 aa11.5□□□□□ -0.57
CTSD-203ENST00000429746 MRPL51Q4U2R6 128 aaKnown RBP11.5□□□□□ -0.57
CTSD-203ENST00000429746 TMEM243Q9BU79 118 aa11.5□□□□□ -0.57
CTSD-203ENST00000429746 FAT1Q14517 4588 aa11.5□□□□□ -0.57
CTSD-203ENST00000429746 A0A1B0GUV1 79 aa11.49□□□□□ -0.57
CTSD-203ENST00000429746 TSHBP01222 138 aa11.49□□□□□ -0.57
CTSD-203ENST00000429746 CAMPP49913 170 aa11.49□□□□□ -0.57
CTSD-203ENST00000429746 COTL1Q14019 142 aa11.49□□□□□ -0.57
CTSD-203ENST00000429746 MRPL54Q6P161 138 aaKnown RBP11.49□□□□□ -0.57
CTSD-203ENST00000429746 KCNIP4Q6PIL6 250 aa11.49□□□□□ -0.57
CTSD-203ENST00000429746 ABCA13Q86UQ4 5058 aa11.48□□□□□ -0.57
CTSD-203ENST00000429746 PCLOQ9Y6V0 5065 aa11.48□□□□□ -0.57
CTSD-203ENST00000429746 TRBV27A0A0K0K1C4 114 aa11.48□□□□□ -0.57
CTSD-203ENST00000429746 A0A1B0GW15 77 aa11.48□□□□□ -0.57
CTSD-203ENST00000429746 PPP1R2P9O14990 202 aa11.48□□□□□ -0.57
CTSD-203ENST00000429746 ESDP10768 282 aa11.48□□□□□ -0.57
CTSD-203ENST00000429746 ELOBQ15370 118 aa11.48□□□□□ -0.57
CTSD-203ENST00000429746 COMMD7Q86VX2 200 aa11.48□□□□□ -0.57
CTSD-203ENST00000429746 Q8N814 137 aa11.48□□□□□ -0.57
CTSD-203ENST00000429746 TM2D2Q9BX73 214 aa11.48□□□□□ -0.57
CTSD-203ENST00000429746 PSCAO43653 123 aa11.47□□□□□ -0.57
CTSD-203ENST00000429746 ANGP03950 147 aaKnown RBP11.47□□□□□ -0.57
CTSD-203ENST00000429746 AMTP48728 403 aa11.47□□□□□ -0.57
CTSD-203ENST00000429746 PKIAP61925 76 aa11.47□□□□□ -0.57
CTSD-203ENST00000429746 HBBP68871 147 aa11.47□□□□□ -0.57
CTSD-203ENST00000429746 C10orf91Q5T1B1 145 aa11.47□□□□□ -0.57
CTSD-203ENST00000429746 Q8N1X5 172 aa11.47□□□□□ -0.57
CTSD-203ENST00000429746 ANAPC16Q96DE5 110 aa11.47□□□□□ -0.57
CTSD-203ENST00000429746 LINC00269Q8N2A0 174 aa11.46□□□□□ -0.57
CTSD-203ENST00000429746 BAALCQ8WXS3 180 aa11.46□□□□□ -0.57
CTSD-203ENST00000429746 SEC11CQ9BY50 192 aa11.46□□□□□ -0.57
CTSD-203ENST00000429746 ST20Q9HBF5 79 aa11.46□□□□□ -0.57
CTSD-203ENST00000429746 TRBV24-1A0A075B6N3 115 aa11.45□□□□□ -0.58
CTSD-203ENST00000429746 IGKV2D-24A0A075B6R9 120 aa11.45□□□□□ -0.58
CTSD-203ENST00000429746 I3L3M4 83 aa11.45□□□□□ -0.58
CTSD-203ENST00000429746 LECT2O14960 151 aa11.45□□□□□ -0.58
CTSD-203ENST00000429746 MT-ND4LP03901 98 aa11.45□□□□□ -0.58
CTSD-203ENST00000429746 KRTAP10-1P60331 282 aa11.45□□□□□ -0.58
CTSD-203ENST00000429746 Q0VG73 95 aa11.45□□□□□ -0.58
CTSD-203ENST00000429746 CLPSL2Q6UWE3 100 aa11.45□□□□□ -0.58
CTSD-203ENST00000429746 ATP5L2Q7Z4Y8 100 aa11.45□□□□□ -0.58
CTSD-203ENST00000429746 KRTAP4-5Q9BYR2 181 aa11.45□□□□□ -0.58
CTSD-203ENST00000429746 TMEM242Q9NWH2 141 aa11.45□□□□□ -0.58
CTSD-203ENST00000429746 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.44□□□□□ -0.58
CTSD-203ENST00000429746 IGKV2-29A2NJV5 120 aaPredicted RBP11.44□□□□□ -0.58
CTSD-203ENST00000429746 F8W036 122 aa11.44□□□□□ -0.58
CTSD-203ENST00000429746 MIAQ16674 131 aa11.44□□□□□ -0.58
CTSD-203ENST00000429746 APCSP02743 223 aa11.43□□□□□ -0.58
CTSD-203ENST00000429746 SUMO2P61956 95 aaKnown RBP11.43□□□□□ -0.58
CTSD-203ENST00000429746 COX11Q9Y6N1 276 aa11.43□□□□□ -0.58
CTSD-203ENST00000429746 PMCHP20382 165 aa11.42□□□□□ -0.58
CTSD-203ENST00000429746 RPL32P62910 135 aaKnown RBP11.42□□□□□ -0.58
CTSD-203ENST00000429746 REG3AQ06141 175 aa11.42□□□□□ -0.58
CTSD-203ENST00000429746 RMI2Q96E14 147 aa11.42□□□□□ -0.58
CTSD-203ENST00000429746 D6R8Y8 96 aa11.41□□□□□ -0.58
CTSD-203ENST00000429746 H7C423 109 aa11.41□□□□□ -0.58
CTSD-203ENST00000429746 NPYP01303 97 aa11.41□□□□□ -0.58
CTSD-203ENST00000429746 CRPP02741 224 aa11.41□□□□□ -0.58
CTSD-203ENST00000429746 NTN5Q8WTR8 489 aaPredicted RBP11.41□□□□□ -0.58
CTSD-203ENST00000429746 C1orf43Q9BWL3 253 aa11.41□□□□□ -0.58
CTSD-203ENST00000429746 CARHSP1Q9Y2V2 147 aaKnown RBP11.41□□□□□ -0.58
CTSD-203ENST00000429746 TNFRSF6BO95407 300 aa11.4□□□□□ -0.58
CTSD-203ENST00000429746 S100A8P05109 93 aa11.4□□□□□ -0.58
CTSD-203ENST00000429746 FGF6P10767 208 aa11.4□□□□□ -0.58
CTSD-203ENST00000429746 C20orf78Q9BR46 151 aa11.4□□□□□ -0.58
CTSD-203ENST00000429746 VCYO14598 125 aa11.39□□□□□ -0.59
CTSD-203ENST00000429746 CKS2P33552 79 aa11.39□□□□□ -0.59
CTSD-203ENST00000429746 XGP55808 180 aa11.39□□□□□ -0.59
CTSD-203ENST00000429746 MRPL52Q86TS9 123 aaKnown RBP11.39□□□□□ -0.59
CTSD-203ENST00000429746 IMMP2LQ96T52 175 aa11.39□□□□□ -0.59
CTSD-203ENST00000429746 UBE2L6O14933 153 aa11.38□□□□□ -0.59
CTSD-203ENST00000429746 PPP1R17O96001 155 aa11.38□□□□□ -0.59
CTSD-203ENST00000429746 FAM104AQ969W3 186 aa11.38□□□□□ -0.59
CTSD-203ENST00000429746 IGLV10-54A0A075B6I4 117 aa11.37□□□□□ -0.59
CTSD-203ENST00000429746 IGLV5-52A0A0A0MRZ9 124 aa11.37□□□□□ -0.59
CTSD-203ENST00000429746 BTF3L4Q96K17 158 aa11.37□□□□□ -0.59
CTSD-203ENST00000429746 SMIM2Q9BVW6 85 aa11.37□□□□□ -0.59
CTSD-203ENST00000429746 CTDSP1Q9GZU7 261 aa11.37□□□□□ -0.59
CTSD-203ENST00000429746 VPS13BQ7Z7G8 4022 aa11.37□□□□□ -0.59
CTSD-203ENST00000429746 PHOX2AO14813 284 aa11.36□□□□□ -0.59
CTSD-203ENST00000429746 PPBPP02775 128 aa11.36□□□□□ -0.59
CTSD-203ENST00000429746 GCSHP23434 173 aa11.36□□□□□ -0.59
CTSD-203ENST00000429746 TMEM136Q6ZRR5 245 aa11.36□□□□□ -0.59
CTSD-203ENST00000429746 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.35□□□□□ -0.59
CTSD-203ENST00000429746 TRAV8-4A0A0B4J246 113 aa11.35□□□□□ -0.59
CTSD-203ENST00000429746 C7orf77A4D0Y5 90 aa11.35□□□□□ -0.59
CTSD-203ENST00000429746 PRSS47A8MTI9 375 aa11.35□□□□□ -0.59
CTSD-203ENST00000429746 USP17L23D6RBM5 183 aa11.35□□□□□ -0.59
CTSD-203ENST00000429746 ZNF25P17030 456 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms