RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 NRGNQ92686 78 aa11.56□□□□□ -0.56
GHDC-203ENST00000428494 BEX4Q9NWD9 120 aaPredicted RBP11.56□□□□□ -0.56
GHDC-203ENST00000428494 SLC25A20O43772 301 aa11.56□□□□□ -0.56
GHDC-203ENST00000428494 ZFAND6Q6FIF0 208 aa11.56□□□□□ -0.56
GHDC-203ENST00000428494 A8MZ25 164 aa11.55□□□□□ -0.56
GHDC-203ENST00000428494 DEFB112Q30KQ8 113 aa11.55□□□□□ -0.56
GHDC-203ENST00000428494 DOPEY1Q5JWR5 2465 aa11.55□□□□□ -0.56
GHDC-203ENST00000428494 A0A0J9YXY3 114 aa11.55□□□□□ -0.56
GHDC-203ENST00000428494 ODF3Q96PU9 254 aa11.55□□□□□ -0.56
GHDC-203ENST00000428494 ANKRD17O75179 2603 aaKnown RBP11.55□□□□□ -0.56
GHDC-203ENST00000428494 NOTCH3Q9UM47 2321 aa11.54□□□□□ -0.56
GHDC-203ENST00000428494 IGHV3-30-3P0DP02 117 aa11.54□□□□□ -0.56
GHDC-203ENST00000428494 Q1RN00 199 aa11.54□□□□□ -0.56
GHDC-203ENST00000428494 PRSS2P07478 247 aa11.54□□□□□ -0.56
GHDC-203ENST00000428494 YAE1D1Q9NRH1 226 aa11.54□□□□□ -0.56
GHDC-203ENST00000428494 FBN2P35556 2912 aa11.54□□□□□ -0.56
GHDC-203ENST00000428494 TEX29Q8N6K0 151 aa11.53□□□□□ -0.56
GHDC-203ENST00000428494 TEX15Q9BXT5 2789 aa11.53□□□□□ -0.56
GHDC-203ENST00000428494 M0R2P5 195 aa11.53□□□□□ -0.56
GHDC-203ENST00000428494 CD28P10747 220 aa11.53□□□□□ -0.56
GHDC-203ENST00000428494 NPC2P61916 151 aa11.53□□□□□ -0.56
GHDC-203ENST00000428494 ADAMTSL4-AS1Q5T5F5 129 aa11.53□□□□□ -0.56
GHDC-203ENST00000428494 GAGE12JA6NER3 117 aa11.52□□□□□ -0.56
GHDC-203ENST00000428494 GAGE7O76087 117 aa11.52□□□□□ -0.56
GHDC-203ENST00000428494 GAGE12FP0CL80 117 aa11.52□□□□□ -0.56
GHDC-203ENST00000428494 GAGE12GP0CL81 117 aa11.52□□□□□ -0.56
GHDC-203ENST00000428494 GAGE12IP0CL82 117 aa11.52□□□□□ -0.56
GHDC-203ENST00000428494 GAGE4Q13068 117 aa11.52□□□□□ -0.56
GHDC-203ENST00000428494 Q6ZSN1 163 aa11.52□□□□□ -0.56
GHDC-203ENST00000428494 MAPK1IP1LQ8NDC0 245 aa11.52□□□□□ -0.56
GHDC-203ENST00000428494 Q6ZSV7 163 aa11.52□□□□□ -0.57
GHDC-203ENST00000428494 IGSF10Q6WRI0 2623 aa11.52□□□□□ -0.57
GHDC-203ENST00000428494 CHD6Q8TD26 2715 aa11.51□□□□□ -0.57
GHDC-203ENST00000428494 A0A0B4J2C4 111 aa11.51□□□□□ -0.57
GHDC-203ENST00000428494 LITAFQ99732 161 aa11.51□□□□□ -0.57
GHDC-203ENST00000428494 TIMM21Q9BVV7 248 aa11.51□□□□□ -0.57
GHDC-203ENST00000428494 C2CD3Q4AC94 2353 aa11.51□□□□□ -0.57
GHDC-203ENST00000428494 HOXD3P31249 432 aaPredicted RBP11.5□□□□□ -0.57
GHDC-203ENST00000428494 CITED1Q99966 193 aa11.5□□□□□ -0.57
GHDC-203ENST00000428494 FAM208BQ5VWN6 2430 aa11.5□□□□□ -0.57
GHDC-203ENST00000428494 B4DSR2 109 aa11.5□□□□□ -0.57
GHDC-203ENST00000428494 NTN5Q8WTR8 489 aaPredicted RBP11.5□□□□□ -0.57
GHDC-203ENST00000428494 NIPBLQ6KC79 2804 aaeCLIP11.5□□□□□ -0.57
GHDC-203ENST00000428494 TLN2Q9Y4G6 2542 aa11.49□□□□□ -0.57
GHDC-203ENST00000428494 AKAP9Q99996 3911 aa11.49□□□□□ -0.57
GHDC-203ENST00000428494 DEFB136Q30KP8 78 aa11.49□□□□□ -0.57
GHDC-203ENST00000428494 USP24Q9UPU5 2620 aa11.49□□□□□ -0.57
GHDC-203ENST00000428494 TRGV11A0A075B6L2 103 aa11.49□□□□□ -0.57
GHDC-203ENST00000428494 TRIAP1O43715 76 aa11.49□□□□□ -0.57
GHDC-203ENST00000428494 C18orf65Q6ZTR6 163 aa11.49□□□□□ -0.57
GHDC-203ENST00000428494 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.48□□□□□ -0.57
GHDC-203ENST00000428494 IGKV2-29A2NJV5 120 aaPredicted RBP11.48□□□□□ -0.57
GHDC-203ENST00000428494 CCDC179H3BU77 68 aa11.48□□□□□ -0.57
GHDC-203ENST00000428494 DEFB131AP59861 70 aa11.48□□□□□ -0.57
GHDC-203ENST00000428494 MRPS36P82909 103 aaKnown RBP11.48□□□□□ -0.57
GHDC-203ENST00000428494 NF1P21359 2839 aa11.48□□□□□ -0.57
GHDC-203ENST00000428494 IGHV3-38A0A0C4DH36 116 aa11.48□□□□□ -0.57
GHDC-203ENST00000428494 TEX49A0A1B0GTD5 131 aa11.48□□□□□ -0.57
GHDC-203ENST00000428494 HIST2H2BDQ6DRA6 164 aa11.48□□□□□ -0.57
GHDC-203ENST00000428494 SPANXA1Q9NS26 97 aa11.48□□□□□ -0.57
GHDC-203ENST00000428494 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.47□□□□□ -0.57
GHDC-203ENST00000428494 LINC01620Q4KN68 170 aa11.47□□□□□ -0.57
GHDC-203ENST00000428494 NDUFA12Q9UI09 145 aa11.47□□□□□ -0.57
GHDC-203ENST00000428494 WNK1Q9H4A3 2382 aa11.47□□□□□ -0.57
GHDC-203ENST00000428494 RBMY1BA6NDE4 496 aaKnown RBP11.47□□□□□ -0.57
GHDC-203ENST00000428494 RBMY1EA6NEQ0 496 aaKnown RBP11.47□□□□□ -0.57
GHDC-203ENST00000428494 RBMY1DP0C7P1 496 aaKnown RBP11.47□□□□□ -0.57
GHDC-203ENST00000428494 NDUFV3P56181 108 aaKnown RBP11.47□□□□□ -0.57
GHDC-203ENST00000428494 PYGO1Q9Y3Y4 419 aa11.47□□□□□ -0.57
GHDC-203ENST00000428494 ABCA12Q86UK0 2595 aa11.47□□□□□ -0.57
GHDC-203ENST00000428494 DAND5Q8N907 189 aa11.46□□□□□ -0.57
GHDC-203ENST00000428494 VPREB3Q9UKI3 123 aa11.46□□□□□ -0.57
GHDC-203ENST00000428494 IGHV1-58A0A0C4DH39 117 aa11.46□□□□□ -0.58
GHDC-203ENST00000428494 SLURP1P55000 103 aa11.46□□□□□ -0.58
GHDC-203ENST00000428494 ATXN8Q156A1 80 aa11.46□□□□□ -0.58
GHDC-203ENST00000428494 DUX3Q96PT4 197 aa11.46□□□□□ -0.58
GHDC-203ENST00000428494 PRORYQ9H606 182 aa11.46□□□□□ -0.58
GHDC-203ENST00000428494 CHCHD7Q9BUK0 85 aa11.45□□□□□ -0.58
GHDC-203ENST00000428494 SETD2Q9BYW2 2564 aaPredicted RBP11.45□□□□□ -0.58
GHDC-203ENST00000428494 LRRK2Q5S007 2527 aa11.45□□□□□ -0.58
GHDC-203ENST00000428494 PTPN13Q12923 2485 aa11.45□□□□□ -0.58
GHDC-203ENST00000428494 TMEM262E9PQX1 116 aa11.44□□□□□ -0.58
GHDC-203ENST00000428494 CRLF1O75462 422 aa11.44□□□□□ -0.58
GHDC-203ENST00000428494 VSIG2Q96IQ7 327 aa11.44□□□□□ -0.58
GHDC-203ENST00000428494 LINC00467Q9BRT7 94 aa11.44□□□□□ -0.58
GHDC-203ENST00000428494 ZFYVE26Q68DK2 2539 aa11.44□□□□□ -0.58
GHDC-203ENST00000428494 TRBV30A0A0K0K1B3 111 aa11.44□□□□□ -0.58
GHDC-203ENST00000428494 UBE2D4Q9Y2X8 147 aa11.44□□□□□ -0.58
GHDC-203ENST00000428494 ZNF469Q96JG9 3925 aaPredicted RBP11.43□□□□□ -0.58
GHDC-203ENST00000428494 CLEC2BQ92478 149 aa11.43□□□□□ -0.58
GHDC-203ENST00000428494 H3BMM0 161 aa11.43□□□□□ -0.58
GHDC-203ENST00000428494 ICOSQ9Y6W8 199 aa11.42□□□□□ -0.58
GHDC-203ENST00000428494 TRAV4A0A0B4J268 109 aa11.42□□□□□ -0.58
GHDC-203ENST00000428494 GAGE2BQ13066 116 aa11.42□□□□□ -0.58
GHDC-203ENST00000428494 GAGE2EQ4V326 116 aa11.42□□□□□ -0.58
GHDC-203ENST00000428494 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.42□□□□□ -0.58
GHDC-203ENST00000428494 GAGE2DQ9UEU5 116 aa11.42□□□□□ -0.58
GHDC-203ENST00000428494 RNF152Q8N8N0 203 aa11.41□□□□□ -0.58
GHDC-203ENST00000428494 CDKN2A-AS1Q9UH64 79 aa11.41□□□□□ -0.58
GHDC-203ENST00000428494 TINCRA0A1B0GVN0 87 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms