RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 ZNF784Q8NCA9 323 aaPredicted RBP3.82□□□□□ -1.8
RIF1-203ENST00000428287 PIK3CD-AS1Q5SR53 167 aa3.81□□□□□ -1.8
RIF1-203ENST00000428287 MAFAQ8NHW3 353 aaPredicted RBP3.81□□□□□ -1.8
RIF1-203ENST00000428287 TRRAPQ9Y4A5 3859 aa3.81□□□□□ -1.8
RIF1-203ENST00000428287 ODF3BA8MYP8 253 aa3.81□□□□□ -1.8
RIF1-203ENST00000428287 C15orf32Q32M92 178 aa3.81□□□□□ -1.8
RIF1-203ENST00000428287 CEMP1Q6PRD7 247 aaPredicted RBP3.81□□□□□ -1.8
RIF1-203ENST00000428287 FAM104AQ969W3 186 aa3.81□□□□□ -1.8
RIF1-203ENST00000428287 OVOL1O14753 267 aa3.81□□□□□ -1.8
RIF1-203ENST00000428287 SCGB2A1O75556 95 aa3.81□□□□□ -1.8
RIF1-203ENST00000428287 C20orf203Q8NBC4 194 aa3.81□□□□□ -1.8
RIF1-203ENST00000428287 IGF2-ASQ6U949 168 aa3.81□□□□□ -1.8
RIF1-203ENST00000428287 M0QY20 66 aa3.81□□□□□ -1.8
RIF1-203ENST00000428287 SOCS3O14543 225 aa3.81□□□□□ -1.8
RIF1-203ENST00000428287 C1orf210Q8IVY1 113 aa3.81□□□□□ -1.8
RIF1-203ENST00000428287 CCL17Q92583 94 aa3.81□□□□□ -1.8
RIF1-203ENST00000428287 TP53TG1Q9Y2A0 90 aa3.81□□□□□ -1.8
RIF1-203ENST00000428287 MINOS1Q5TGZ0 78 aa3.81□□□□□ -1.8
RIF1-203ENST00000428287 PEMTQ9UBM1 199 aa3.81□□□□□ -1.8
RIF1-203ENST00000428287 MINOS1-NBL1R4GNA1 71 aa3.81□□□□□ -1.8
RIF1-203ENST00000428287 M0R1W7 72 aa3.8□□□□□ -1.8
RIF1-203ENST00000428287 RPL39P62891 51 aaKnown RBP3.8□□□□□ -1.8
RIF1-203ENST00000428287 MIAQ16674 131 aa3.8□□□□□ -1.8
RIF1-203ENST00000428287 MUSTN1Q8IVN3 82 aa3.8□□□□□ -1.8
RIF1-203ENST00000428287 DLX1P56177 255 aa3.8□□□□□ -1.8
RIF1-203ENST00000428287 IGLV4-3A0A075B6K6 122 aa3.8□□□□□ -1.8
RIF1-203ENST00000428287 SMIM9A6NGZ8 99 aa3.8□□□□□ -1.8
RIF1-203ENST00000428287 TMEM258P61165 79 aa3.8□□□□□ -1.8
RIF1-203ENST00000428287 IGHV3OR16-10A0A075B7F0 116 aa3.8□□□□□ -1.8
RIF1-203ENST00000428287 ZNF415Q09FC8 603 aa3.8□□□□□ -1.8
RIF1-203ENST00000428287 ITLN2Q8WWU7 325 aaPredicted RBP3.8□□□□□ -1.8
RIF1-203ENST00000428287 EPM2AB3EWF7 344 aa3.8□□□□□ -1.8
RIF1-203ENST00000428287 ATOX1O00244 68 aa3.8□□□□□ -1.8
RIF1-203ENST00000428287 TRBV7-1A0A0A6YYK4 115 aa3.8□□□□□ -1.8
RIF1-203ENST00000428287 J3KT08 172 aa3.8□□□□□ -1.8
RIF1-203ENST00000428287 LEPROTO15243 131 aa3.8□□□□□ -1.8
RIF1-203ENST00000428287 FAM27E3Q08E93 113 aa3.8□□□□□ -1.8
RIF1-203ENST00000428287 ICOSQ9Y6W8 199 aa3.8□□□□□ -1.8
RIF1-203ENST00000428287 IGHV1-58A0A0C4DH39 117 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 M0R1B8 84 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 ATP5J2P56134 94 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 HERVK_113P63121 156 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 I3L3M4 83 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 C19orf54Q5BKX5 351 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 PLA2G2CQ5R387 149 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 ADAMTSL4-AS1Q5T5F5 129 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 TRACP01848 142 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 ZNF256Q9Y2P7 627 aaPredicted RBP3.79□□□□□ -1.8
RIF1-203ENST00000428287 S100A4P26447 101 aaKnown RBP3.79□□□□□ -1.8
RIF1-203ENST00000428287 ID1P41134 155 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 FBXL19-AS1Q494R0 122 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 RNF182Q8N6D2 247 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 OBSCN-AS1Q96MR7 158 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 UPK3BQ9BT76 320 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 DYNLRB1Q9NP97 96 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 TRAV8-4A0A0B4J246 113 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 LINC00694P0DN24 101 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 EMP1P54849 157 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 INAFM2P0DMQ5 153 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 BSPH1Q075Z2 132 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 C9orf85Q96MD7 179 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 CCDC140Q96MF4 163 aa3.79□□□□□ -1.8
RIF1-203ENST00000428287 E7EQL1 145 aa3.78□□□□□ -1.8
RIF1-203ENST00000428287 B9A039 149 aa3.78□□□□□ -1.8
RIF1-203ENST00000428287 COX7A2LO14548 114 aa3.78□□□□□ -1.8
RIF1-203ENST00000428287 DUX3Q96PT4 197 aa3.78□□□□□ -1.8
RIF1-203ENST00000428287 CHCHD5Q9BSY4 110 aa3.78□□□□□ -1.8
RIF1-203ENST00000428287 UBE2E1P51965 193 aa3.78□□□□□ -1.8
RIF1-203ENST00000428287 FAM110DQ8TAY7 271 aaPredicted RBP3.78□□□□□ -1.8
RIF1-203ENST00000428287 PRSS2P07478 247 aa3.78□□□□□ -1.8
RIF1-203ENST00000428287 LYPD5Q6UWN5 251 aa3.78□□□□□ -1.8
RIF1-203ENST00000428287 PF4P02776 101 aa3.78□□□□□ -1.8
RIF1-203ENST00000428287 C9orf153Q5TBE3 101 aa3.78□□□□□ -1.8
RIF1-203ENST00000428287 IGLV5-39A0A0G2JS06 123 aa3.77□□□□□ -1.81
RIF1-203ENST00000428287 LOC107984640A0A0U1RRK4 108 aa3.77□□□□□ -1.81
RIF1-203ENST00000428287 IGF1P05019 195 aa3.77□□□□□ -1.81
RIF1-203ENST00000428287 IGFL4Q6B9Z1 124 aa3.77□□□□□ -1.81
RIF1-203ENST00000428287 SMCR5Q8TEV8 140 aa3.77□□□□□ -1.81
RIF1-203ENST00000428287 A0A0J9YXV3 536 aa3.77□□□□□ -1.81
RIF1-203ENST00000428287 TCF15Q12870 199 aa3.77□□□□□ -1.81
RIF1-203ENST00000428287 ZNF56Q15929 161 aa3.77□□□□□ -1.81
RIF1-203ENST00000428287 LGALS3P17931 250 aaKnown RBP3.77□□□□□ -1.81
RIF1-203ENST00000428287 SERP2Q8N6R1 65 aa3.77□□□□□ -1.81
RIF1-203ENST00000428287 TIRAPP58753 221 aa3.77□□□□□ -1.81
RIF1-203ENST00000428287 PRO3102Q9H379 93 aa3.76□□□□□ -1.81
RIF1-203ENST00000428287 UBE2D4Q9Y2X8 147 aa3.76□□□□□ -1.81
RIF1-203ENST00000428287 A8MTW9 85 aa3.76□□□□□ -1.81
RIF1-203ENST00000428287 LINC00527Q9UJ94 153 aa3.76□□□□□ -1.81
RIF1-203ENST00000428287 PRB4P10163 310 aaPredicted RBP3.76□□□□□ -1.81
RIF1-203ENST00000428287 RPL18AQ02543 176 aaKnown RBP3.76□□□□□ -1.81
RIF1-203ENST00000428287 DAZ2Q13117 558 aaKnown RBP3.76□□□□□ -1.81
RIF1-203ENST00000428287 ATP1A1-AS1Q5TC04 95 aa3.76□□□□□ -1.81
RIF1-203ENST00000428287 DAZ4Q86SG3 579 aaKnown RBP3.76□□□□□ -1.81
RIF1-203ENST00000428287 DAZ1Q9NQZ3 744 aaKnown RBP3.76□□□□□ -1.81
RIF1-203ENST00000428287 DAZ3Q9NR90 486 aaKnown RBP3.76□□□□□ -1.81
RIF1-203ENST00000428287 S4R3C0 116 aa3.76□□□□□ -1.81
RIF1-203ENST00000428287 TINCRA0A1B0GVN0 87 aa3.76□□□□□ -1.81
RIF1-203ENST00000428287 MRAPQ8TCY5 172 aa3.76□□□□□ -1.81
RIF1-203ENST00000428287 NDUFA12Q9UI09 145 aa3.76□□□□□ -1.81
RIF1-203ENST00000428287 ZNF580Q9UK33 172 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms