RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 CDIP1Q9H305 208 aa6.09□□□□□ -1.43
SMC1A-203ENST00000428014 NAT8BQ9UHF3 227 aa6.09□□□□□ -1.43
SMC1A-203ENST00000428014 V9GYV3 84 aa6.09□□□□□ -1.43
SMC1A-203ENST00000428014 KIAA1109Q2LD37 5005 aa6.09□□□□□ -1.44
SMC1A-203ENST00000428014 DYNC1H1Q14204 4646 aaKnown RBP6.08□□□□□ -1.44
SMC1A-203ENST00000428014 HIGD1CA8MV81 97 aa6.08□□□□□ -1.44
SMC1A-203ENST00000428014 S100A8P05109 93 aa6.08□□□□□ -1.44
SMC1A-203ENST00000428014 KRTAP10-2P60368 255 aa6.08□□□□□ -1.44
SMC1A-203ENST00000428014 ADIRFQ15847 76 aa6.08□□□□□ -1.44
SMC1A-203ENST00000428014 NTM-AS1Q6ZSK4 140 aa6.08□□□□□ -1.44
SMC1A-203ENST00000428014 SVBPQ8N300 66 aa6.08□□□□□ -1.44
SMC1A-203ENST00000428014 Q8N814 137 aa6.08□□□□□ -1.44
SMC1A-203ENST00000428014 Q8N976 141 aa6.08□□□□□ -1.44
SMC1A-203ENST00000428014 MRAP2Q96G30 205 aa6.08□□□□□ -1.44
SMC1A-203ENST00000428014 TMEM70Q9BUB7 260 aa6.08□□□□□ -1.44
SMC1A-203ENST00000428014 SMIM27A0A1W2PRY6 76 aa6.07□□□□□ -1.44
SMC1A-203ENST00000428014 PPP1R2P9O14990 202 aa6.07□□□□□ -1.44
SMC1A-203ENST00000428014 TCAPO15273 167 aa6.07□□□□□ -1.44
SMC1A-203ENST00000428014 SNAPINO95295 136 aa6.07□□□□□ -1.44
SMC1A-203ENST00000428014 IGHV3-30P01768 117 aa6.07□□□□□ -1.44
SMC1A-203ENST00000428014 IGHV3-33P01772 117 aa6.07□□□□□ -1.44
SMC1A-203ENST00000428014 IGHV3-30-3P0DP02 117 aa6.07□□□□□ -1.44
SMC1A-203ENST00000428014 IGHV3-30-5P0DP03 117 aa6.07□□□□□ -1.44
SMC1A-203ENST00000428014 RPL32P62910 135 aaKnown RBP6.07□□□□□ -1.44
SMC1A-203ENST00000428014 RIGQ13278 110 aa6.07□□□□□ -1.44
SMC1A-203ENST00000428014 COTL1Q14019 142 aa6.07□□□□□ -1.44
SMC1A-203ENST00000428014 GATD1Q8NB37 220 aa6.07□□□□□ -1.44
SMC1A-203ENST00000428014 HERC2O95714 4834 aa6.07□□□□□ -1.44
SMC1A-203ENST00000428014 TRBV27A0A0K0K1C4 114 aa6.06□□□□□ -1.44
SMC1A-203ENST00000428014 APOC3P02656 99 aa6.06□□□□□ -1.44
SMC1A-203ENST00000428014 MGPP08493 103 aa6.06□□□□□ -1.44
SMC1A-203ENST00000428014 ZNF25P17030 456 aaPredicted RBP6.06□□□□□ -1.44
SMC1A-203ENST00000428014 S100A1P23297 94 aa6.06□□□□□ -1.44
SMC1A-203ENST00000428014 ATP5L2Q7Z4Y8 100 aa6.06□□□□□ -1.44
SMC1A-203ENST00000428014 CHCHD5Q9BSY4 110 aa6.06□□□□□ -1.44
SMC1A-203ENST00000428014 TMEM243Q9BU79 118 aa6.06□□□□□ -1.44
SMC1A-203ENST00000428014 C1orf43Q9BWL3 253 aa6.06□□□□□ -1.44
SMC1A-203ENST00000428014 TMA7Q9Y2S6 64 aaKnown RBP6.06□□□□□ -1.44
SMC1A-203ENST00000428014 LRP1BQ9NZR2 4599 aa6.06□□□□□ -1.44
SMC1A-203ENST00000428014 TRBV24-1A0A075B6N3 115 aa6.05□□□□□ -1.44
SMC1A-203ENST00000428014 MUC21A0A0G2JKD1 596 aa6.05□□□□□ -1.44
SMC1A-203ENST00000428014 MUC21A0A140T8X8 626 aa6.05□□□□□ -1.44
SMC1A-203ENST00000428014 PHOX2AO14813 284 aa6.05□□□□□ -1.44
SMC1A-203ENST00000428014 ATP6V1G1O75348 118 aa6.05□□□□□ -1.44
SMC1A-203ENST00000428014 CRPP02741 224 aa6.05□□□□□ -1.44
SMC1A-203ENST00000428014 MT-ND4LP03901 98 aa6.05□□□□□ -1.44
SMC1A-203ENST00000428014 POLR2KP53803 58 aaKnown RBP6.05□□□□□ -1.44
SMC1A-203ENST00000428014 RBX1P62877 108 aa6.05□□□□□ -1.44
SMC1A-203ENST00000428014 SMAGPQ0VAQ4 97 aa6.05□□□□□ -1.44
SMC1A-203ENST00000428014 RHEBQ15382 184 aa6.05□□□□□ -1.44
SMC1A-203ENST00000428014 MPV17L2Q567V2 206 aa6.05□□□□□ -1.44
SMC1A-203ENST00000428014 NUP35Q8NFH5 326 aa6.05□□□□□ -1.44
SMC1A-203ENST00000428014 KLK12Q9UKR0 248 aa6.05□□□□□ -1.44
SMC1A-203ENST00000428014 SDHAF1A6NFY7 115 aa6.04□□□□□ -1.44
SMC1A-203ENST00000428014 TMEM262E9PQX1 116 aa6.04□□□□□ -1.44
SMC1A-203ENST00000428014 I3L3M4 83 aa6.04□□□□□ -1.44
SMC1A-203ENST00000428014 PPBPP02775 128 aa6.04□□□□□ -1.44
SMC1A-203ENST00000428014 GCSHP23434 173 aa6.04□□□□□ -1.44
SMC1A-203ENST00000428014 C21orf62-AS1Q17RA5 79 aa6.04□□□□□ -1.44
SMC1A-203ENST00000428014 DGAT2L7PQ6IED9 249 aa6.04□□□□□ -1.44
SMC1A-203ENST00000428014 ENHOQ6UWT2 76 aa6.04□□□□□ -1.44
SMC1A-203ENST00000428014 Q6ZSA8 131 aa6.04□□□□□ -1.44
SMC1A-203ENST00000428014 MRPL52Q86TS9 123 aaKnown RBP6.04□□□□□ -1.44
SMC1A-203ENST00000428014 CLRN3Q8NCR9 226 aa6.04□□□□□ -1.44
SMC1A-203ENST00000428014 CTDSP1Q9GZU7 261 aa6.04□□□□□ -1.44
SMC1A-203ENST00000428014 Q9HAA7 133 aa6.04□□□□□ -1.44
SMC1A-203ENST00000428014 PLA2G2DQ9UNK4 145 aa6.04□□□□□ -1.44
SMC1A-203ENST00000428014 CSDC2Q9Y534 153 aaKnown RBP6.04□□□□□ -1.44
SMC1A-203ENST00000428014 CCL25O15444 150 aa6.03□□□□□ -1.44
SMC1A-203ENST00000428014 ANGP03950 147 aaKnown RBP6.03□□□□□ -1.44
SMC1A-203ENST00000428014 ESDP10768 282 aa6.03□□□□□ -1.44
SMC1A-203ENST00000428014 RAB4AP20338 218 aa6.03□□□□□ -1.44
SMC1A-203ENST00000428014 Q8N1X5 172 aa6.03□□□□□ -1.44
SMC1A-203ENST00000428014 C20orf203Q8NBC4 194 aa6.03□□□□□ -1.44
SMC1A-203ENST00000428014 UBE2WQ96B02 151 aa6.03□□□□□ -1.44
SMC1A-203ENST00000428014 RNF185Q96GF1 192 aa6.03□□□□□ -1.44
SMC1A-203ENST00000428014 C20orf78Q9BR46 151 aa6.03□□□□□ -1.44
SMC1A-203ENST00000428014 TMEM242Q9NWH2 141 aa6.03□□□□□ -1.44
SMC1A-203ENST00000428014 IGLV5-52A0A0A0MRZ9 124 aa6.02□□□□□ -1.45
SMC1A-203ENST00000428014 A0A1B0GXF2 115 aa6.02□□□□□ -1.45
SMC1A-203ENST00000428014 C7orf77A4D0Y5 90 aa6.02□□□□□ -1.45
SMC1A-203ENST00000428014 VCYO14598 125 aa6.02□□□□□ -1.45
SMC1A-203ENST00000428014 AMTP48728 403 aa6.02□□□□□ -1.45
SMC1A-203ENST00000428014 REG3AQ06141 175 aa6.02□□□□□ -1.45
SMC1A-203ENST00000428014 FAM104BQ5XKR9 115 aa6.02□□□□□ -1.45
SMC1A-203ENST00000428014 KRTAP26-1Q6PEX3 210 aa6.02□□□□□ -1.45
SMC1A-203ENST00000428014 MAPKAPK5-AS1Q8N8E1 139 aa6.02□□□□□ -1.45
SMC1A-203ENST00000428014 IMMP2LQ96T52 175 aa6.02□□□□□ -1.45
SMC1A-203ENST00000428014 ST20Q9HBF5 79 aa6.02□□□□□ -1.45
SMC1A-203ENST00000428014 LAMTOR2Q9Y2Q5 125 aa6.02□□□□□ -1.45
SMC1A-203ENST00000428014 RYR1P21817 5038 aa6.01□□□□□ -1.45
SMC1A-203ENST00000428014 IGKV2D-24A0A075B6R9 120 aa6.01□□□□□ -1.45
SMC1A-203ENST00000428014 UBE2L6O14933 153 aa6.01□□□□□ -1.45
SMC1A-203ENST00000428014 APCSP02743 223 aa6.01□□□□□ -1.45
SMC1A-203ENST00000428014 SSTP61278 116 aa6.01□□□□□ -1.45
SMC1A-203ENST00000428014 HBBP68871 147 aa6.01□□□□□ -1.45
SMC1A-203ENST00000428014 TIMM21Q9BVV7 248 aa6.01□□□□□ -1.45
SMC1A-203ENST00000428014 RPS10P5Q9NQ39 176 aa6.01□□□□□ -1.45
SMC1A-203ENST00000428014 DNAH5Q8TE73 4624 aa6.01□□□□□ -1.45
SMC1A-203ENST00000428014 TRAV9-1A0A075B6T8 112 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms