RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 GAGE12IP0CL82 117 aa15.58■□□□□ 0.08
CNEP1R1-202ENST00000427478 NOTCH3Q9UM47 2321 aa15.57■□□□□ 0.08
CNEP1R1-202ENST00000427478 TMEM97Q5BJF2 176 aa15.56■□□□□ 0.08
CNEP1R1-202ENST00000427478 C11orf86A6NJI1 115 aa15.56■□□□□ 0.08
CNEP1R1-202ENST00000427478 SIVA1O15304 175 aa15.56■□□□□ 0.08
CNEP1R1-202ENST00000427478 ZMAT5Q9UDW3 170 aaKnown RBP15.56■□□□□ 0.08
CNEP1R1-202ENST00000427478 TRGV2A0A075B6R0 118 aa15.55■□□□□ 0.08
CNEP1R1-202ENST00000427478 TRAV8-6A0A0B4J262 113 aa15.55■□□□□ 0.08
CNEP1R1-202ENST00000427478 K7EQD1 137 aa15.55■□□□□ 0.08
CNEP1R1-202ENST00000427478 ZNRF2Q8NHG8 242 aa15.55■□□□□ 0.08
CNEP1R1-202ENST00000427478 OVOL2Q9BRP0 275 aa15.55■□□□□ 0.08
CNEP1R1-202ENST00000427478 CHCHD7Q9BUK0 85 aa15.55■□□□□ 0.08
CNEP1R1-202ENST00000427478 IGLV4-3A0A075B6K6 122 aa15.54■□□□□ 0.08
CNEP1R1-202ENST00000427478 TEP1Q99973 2627 aaKnown RBP15.54■□□□□ 0.08
CNEP1R1-202ENST00000427478 COTL1Q14019 142 aa15.53■□□□□ 0.08
CNEP1R1-202ENST00000427478 MAPKAPK5-AS1Q8N8E1 139 aa15.53■□□□□ 0.08
CNEP1R1-202ENST00000427478 SLC25A29Q8N8R3 303 aa15.53■□□□□ 0.08
CNEP1R1-202ENST00000427478 TRBV7-3A0A075B6L6 115 aa15.52■□□□□ 0.08
CNEP1R1-202ENST00000427478 PAPPA-AS1Q5QFB9 102 aa15.52■□□□□ 0.08
CNEP1R1-202ENST00000427478 FLNBO75369 2602 aaKnown RBP15.52■□□□□ 0.08
CNEP1R1-202ENST00000427478 ATRQ13535 2644 aa15.52■□□□□ 0.07
CNEP1R1-202ENST00000427478 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.52■□□□□ 0.07
CNEP1R1-202ENST00000427478 IGKV2-29A2NJV5 120 aaPredicted RBP15.52■□□□□ 0.07
CNEP1R1-202ENST00000427478 CEMP1Q6PRD7 247 aaPredicted RBP15.52■□□□□ 0.07
CNEP1R1-202ENST00000427478 RPL36AP83881 106 aaKnown RBP15.51■□□□□ 0.07
CNEP1R1-202ENST00000427478 OR11H2Q8NH07 326 aa15.51■□□□□ 0.07
CNEP1R1-202ENST00000427478 RPL36ALQ969Q0 106 aaKnown RBP15.51■□□□□ 0.07
CNEP1R1-202ENST00000427478 PYGO1Q9Y3Y4 419 aa15.51■□□□□ 0.07
CNEP1R1-202ENST00000427478 TRBV25-1A0A075B6N4 114 aa15.5■□□□□ 0.07
CNEP1R1-202ENST00000427478 TRBV10-1A0A0K0K1A3 114 aa15.5■□□□□ 0.07
CNEP1R1-202ENST00000427478 E9PLD3 99 aa15.5■□□□□ 0.07
CNEP1R1-202ENST00000427478 ZNF25P17030 456 aaPredicted RBP15.5■□□□□ 0.07
CNEP1R1-202ENST00000427478 VCX2Q9H322 139 aa15.5■□□□□ 0.07
CNEP1R1-202ENST00000427478 HSD52Q0P140 79 aa15.5■□□□□ 0.07
CNEP1R1-202ENST00000427478 WFDC9Q8NEX5 89 aa15.5■□□□□ 0.07
CNEP1R1-202ENST00000427478 PRADC1Q9BSG0 188 aa15.5■□□□□ 0.07
CNEP1R1-202ENST00000427478 KRTAP24-1Q3LI83 254 aa15.49■□□□□ 0.07
CNEP1R1-202ENST00000427478 Q6ZVH6 145 aa15.49■□□□□ 0.07
CNEP1R1-202ENST00000427478 FAM104AQ969W3 186 aa15.49■□□□□ 0.07
CNEP1R1-202ENST00000427478 TMEM170BQ5T4T1 132 aa15.49■□□□□ 0.07
CNEP1R1-202ENST00000427478 UBE2D4Q9Y2X8 147 aa15.49■□□□□ 0.07
CNEP1R1-202ENST00000427478 GAGE12JA6NER3 117 aa15.48■□□□□ 0.07
CNEP1R1-202ENST00000427478 GAGE1Q13065 139 aa15.48■□□□□ 0.07
CNEP1R1-202ENST00000427478 GAGE4Q13068 117 aa15.48■□□□□ 0.07
CNEP1R1-202ENST00000427478 GAGE5Q13069 117 aa15.48■□□□□ 0.07
CNEP1R1-202ENST00000427478 GAGE13Q4V321 117 aa15.48■□□□□ 0.07
CNEP1R1-202ENST00000427478 CHAC1Q9BUX1 264 aa15.48■□□□□ 0.07
CNEP1R1-202ENST00000427478 HIGD1BQ9P298 99 aa15.48■□□□□ 0.07
CNEP1R1-202ENST00000427478 X6R8D5 127 aa15.48■□□□□ 0.07
CNEP1R1-202ENST00000427478 RNASE13Q5GAN3 156 aaKnown RBP15.47■□□□□ 0.07
CNEP1R1-202ENST00000427478 TRGV4A0A0C4DH28 118 aa15.46■□□□□ 0.07
CNEP1R1-202ENST00000427478 HERVK_113P61574 105 aa15.46■□□□□ 0.07
CNEP1R1-202ENST00000427478 NFE4Q86UQ8 179 aa15.46■□□□□ 0.07
CNEP1R1-202ENST00000427478 SPANXA1Q9NS26 97 aa15.46■□□□□ 0.07
CNEP1R1-202ENST00000427478 UBE2D3P61077 147 aa15.46■□□□□ 0.06
CNEP1R1-202ENST00000427478 UBE2D2P62837 147 aa15.46■□□□□ 0.06
CNEP1R1-202ENST00000427478 AMELXQ99217 191 aa15.46■□□□□ 0.06
CNEP1R1-202ENST00000427478 A0A0J9YXV3 536 aa15.44■□□□□ 0.06
CNEP1R1-202ENST00000427478 LOC100131303A0A0U1RQF7 123 aa15.44■□□□□ 0.06
CNEP1R1-202ENST00000427478 MYMXA0A1B0GTQ4 84 aa15.44■□□□□ 0.06
CNEP1R1-202ENST00000427478 CIDEAO60543 219 aa15.44■□□□□ 0.06
CNEP1R1-202ENST00000427478 DEFB130BP0DP73 79 aa15.44■□□□□ 0.06
CNEP1R1-202ENST00000427478 DEFB130AP0DP74 79 aa15.44■□□□□ 0.06
CNEP1R1-202ENST00000427478 DEFB135Q30KP9 77 aa15.44■□□□□ 0.06
CNEP1R1-202ENST00000427478 DAZ4Q86SG3 579 aaKnown RBP15.44■□□□□ 0.06
CNEP1R1-202ENST00000427478 ORAOV1Q8WV07 137 aa15.44■□□□□ 0.06
CNEP1R1-202ENST00000427478 DAZ3Q9NR90 486 aaKnown RBP15.44■□□□□ 0.06
CNEP1R1-202ENST00000427478 TRBV6-4A0A1B0GX49 114 aa15.43■□□□□ 0.06
CNEP1R1-202ENST00000427478 APOC4P55056 127 aa15.43■□□□□ 0.06
CNEP1R1-202ENST00000427478 SEC11AP67812 179 aa15.43■□□□□ 0.06
CNEP1R1-202ENST00000427478 Q6ZUT4 128 aa15.43■□□□□ 0.06
CNEP1R1-202ENST00000427478 WIPF1O43516 503 aa15.43■□□□□ 0.06
CNEP1R1-202ENST00000427478 NPSP0C0P6 89 aa15.43■□□□□ 0.06
CNEP1R1-202ENST00000427478 FHL2Q14192 279 aa15.43■□□□□ 0.06
CNEP1R1-202ENST00000427478 KIR2DL5BQ8NHK3 375 aa15.43■□□□□ 0.06
CNEP1R1-202ENST00000427478 COX11Q9Y6N1 276 aa15.43■□□□□ 0.06
CNEP1R1-202ENST00000427478 SMIM9A6NGZ8 99 aa15.42■□□□□ 0.06
CNEP1R1-202ENST00000427478 TAX1BP3O14907 124 aa15.42■□□□□ 0.06
CNEP1R1-202ENST00000427478 CRYBA4P53673 196 aa15.42■□□□□ 0.06
CNEP1R1-202ENST00000427478 TRRAPQ9Y4A5 3859 aa15.41■□□□□ 0.06
CNEP1R1-202ENST00000427478 CYSRT1A8MQ03 144 aa15.41■□□□□ 0.06
CNEP1R1-202ENST00000427478 NTM-AS1Q6ZSK4 140 aa15.41■□□□□ 0.06
CNEP1R1-202ENST00000427478 ZNF815PA8K554 130 aa15.41■□□□□ 0.06
CNEP1R1-202ENST00000427478 ZNF22P17026 224 aaPredicted RBP15.41■□□□□ 0.06
CNEP1R1-202ENST00000427478 GCSHP23434 173 aa15.4■□□□□ 0.06
CNEP1R1-202ENST00000427478 LINC00612Q8N6U2 182 aa15.4■□□□□ 0.06
CNEP1R1-202ENST00000427478 TMEM223A0PJW6 202 aa15.38■□□□□ 0.05
CNEP1R1-202ENST00000427478 LINC00694P0DN24 101 aa15.38■□□□□ 0.05
CNEP1R1-202ENST00000427478 TSPEAR-AS2P59090 65 aa15.38■□□□□ 0.05
CNEP1R1-202ENST00000427478 A6NDN8 102 aa15.38■□□□□ 0.05
CNEP1R1-202ENST00000427478 MRPS36P82909 103 aaKnown RBP15.38■□□□□ 0.05
CNEP1R1-202ENST00000427478 DGAT2L7PQ6IED9 249 aa15.38■□□□□ 0.05
CNEP1R1-202ENST00000427478 IGHV4-30-4P0DP06 118 aa15.37■□□□□ 0.05
CNEP1R1-202ENST00000427478 FXYD2P54710 66 aa15.37■□□□□ 0.05
CNEP1R1-202ENST00000427478 C3orf56Q8N813 242 aa15.37■□□□□ 0.05
CNEP1R1-202ENST00000427478 TIMM21Q9BVV7 248 aa15.37■□□□□ 0.05
CNEP1R1-202ENST00000427478 IGHV3-64A0A075B6Q5 118 aa15.36■□□□□ 0.05
CNEP1R1-202ENST00000427478 K7EP13 123 aa15.36■□□□□ 0.05
CNEP1R1-202ENST00000427478 DEFB4AO15263 64 aa15.36■□□□□ 0.05
CNEP1R1-202ENST00000427478 OXLD1Q5BKU9 147 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms