RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 RABAC1Q9UI14 185 aa3.41□□□□□ -1.86
SSBP3-207ENST00000426150 HIGD1AQ9Y241 93 aa3.41□□□□□ -1.86
SSBP3-207ENST00000426150 UFC1Q9Y3C8 167 aa3.41□□□□□ -1.86
SSBP3-207ENST00000426150 PUS1Q9Y606 427 aaKnown RBP eCLIP3.41□□□□□ -1.86
SSBP3-207ENST00000426150 TRAV8-3A0A0A6YYJ7 113 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 CTXND1A0A1B0GTU2 59 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 TMEM213A2RRL7 107 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 A8MWP6 167 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 CD5P06127 495 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 PRB4P10163 310 aaPredicted RBP3.4□□□□□ -1.87
SSBP3-207ENST00000426150 ORM2P19652 201 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 NPPCP23582 126 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 CRYBB3P26998 211 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 CDC34P49427 236 aaPredicted RBP3.4□□□□□ -1.87
SSBP3-207ENST00000426150 RAB14P61106 215 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 TMEM241Q24JQ0 296 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 KHDC3LQ587J8 217 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 DNLZQ5SXM8 178 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 FAM78BQ5VT40 261 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 ALKAL2Q6UX46 152 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 TOMM20LQ6UXN7 152 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 LINC00305Q7Z4B0 112 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 IQCF2Q8IXL9 164 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 ZNF680Q8NEM1 530 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 ANAPC13Q9BS18 74 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 PBDC1Q9BVG4 233 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 SCRT1Q9BWW7 348 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 SH3BGRL3Q9H299 93 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 FUT9Q9Y231 359 aa3.4□□□□□ -1.87
SSBP3-207ENST00000426150 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.39□□□□□ -1.87
SSBP3-207ENST00000426150 H3BRN7 92 aa3.39□□□□□ -1.87
SSBP3-207ENST00000426150 C8orf88P0DMB2 117 aa3.39□□□□□ -1.87
SSBP3-207ENST00000426150 SCGB1C2P0DMR2 95 aa3.39□□□□□ -1.87
SSBP3-207ENST00000426150 C1orf194Q5T5A4 169 aa3.39□□□□□ -1.87
SSBP3-207ENST00000426150 BPIFA4PQ86YQ2 179 aa3.39□□□□□ -1.87
SSBP3-207ENST00000426150 RNF182Q8N6D2 247 aa3.39□□□□□ -1.87
SSBP3-207ENST00000426150 GATD1Q8NB37 220 aa3.39□□□□□ -1.87
SSBP3-207ENST00000426150 OR8A1Q8NGG7 326 aa3.39□□□□□ -1.87
SSBP3-207ENST00000426150 FAM213BQ8TBF2 198 aa3.39□□□□□ -1.87
SSBP3-207ENST00000426150 MBD3L1Q8WWY6 194 aa3.39□□□□□ -1.87
SSBP3-207ENST00000426150 FXYD5Q96DB9 178 aa3.39□□□□□ -1.87
SSBP3-207ENST00000426150 SHANK2-AS3Q9BTD1 123 aa3.39□□□□□ -1.87
SSBP3-207ENST00000426150 RPRMQ9NS64 109 aa3.39□□□□□ -1.87
SSBP3-207ENST00000426150 MRPL27Q9P0M9 148 aaKnown RBP3.39□□□□□ -1.87
SSBP3-207ENST00000426150 TRAV1-1A0A0B4J248 108 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 NBDYA0A0U1RRE5 68 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 MAP1LC3B2A6NCE7 125 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 OR4C46A6NHA9 309 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 IFNA1P01562 189 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 HTN3P15516 51 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 RPL7P18124 248 aaKnown RBP3.38□□□□□ -1.87
SSBP3-207ENST00000426150 FUSP35637 526 aaKnown RBP eCLIP3.38□□□□□ -1.87
SSBP3-207ENST00000426150 PSMB3P49720 205 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 IFITM2Q01629 132 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 C12orf74Q32Q52 190 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 CLLU1Q5K131 121 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 FAM74A1Q5RGS3 127 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 SAMD13Q5VXD3 122 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 PATE2Q6UY27 113 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 OR8I2Q8N0Y5 310 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 C15orf53Q8NAA6 179 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 Q8NAQ8 132 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 RMI2Q96E14 147 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 MAP1LC3BQ9GZQ8 125 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 VSIRQ9H7M9 311 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 MANBALQ9NQG1 85 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 TMEM167BQ9NRX6 74 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 TMEM14CQ9P0S9 112 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 DOK5Q9P104 306 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 ARL2-SNX15V9GYD0 113 aa3.38□□□□□ -1.87
SSBP3-207ENST00000426150 TRAV8-2A0A0B4J237 113 aa3.37□□□□□ -1.87
SSBP3-207ENST00000426150 IGLV7-43P04211 117 aa3.37□□□□□ -1.87
SSBP3-207ENST00000426150 ARL14EPLP0DKL9 152 aa3.37□□□□□ -1.87
SSBP3-207ENST00000426150 HIST1H1EP10412 219 aaKnown RBP3.37□□□□□ -1.87
SSBP3-207ENST00000426150 MIFP14174 115 aa3.37□□□□□ -1.87
SSBP3-207ENST00000426150 UBE2G2P60604 165 aa3.37□□□□□ -1.87
SSBP3-207ENST00000426150 PDE6HQ13956 83 aa3.37□□□□□ -1.87
SSBP3-207ENST00000426150 GUK1Q16774 197 aa3.37□□□□□ -1.87
SSBP3-207ENST00000426150 FAM162BQ5T6X4 162 aa3.37□□□□□ -1.87
SSBP3-207ENST00000426150 SPATA31B1PQ5VZV4 182 aa3.37□□□□□ -1.87
SSBP3-207ENST00000426150 LCN15Q6UWW0 184 aa3.37□□□□□ -1.87
SSBP3-207ENST00000426150 MIR17HGQ75NE6 70 aa3.37□□□□□ -1.87
SSBP3-207ENST00000426150 SUN5Q8TC36 379 aa3.37□□□□□ -1.87
SSBP3-207ENST00000426150 SFT2D1Q8WV19 159 aa3.37□□□□□ -1.87
SSBP3-207ENST00000426150 FAM167A-AS1Q96KT0 104 aa3.37□□□□□ -1.87
SSBP3-207ENST00000426150 TXNDC17Q9BRA2 123 aa3.37□□□□□ -1.87
SSBP3-207ENST00000426150 RHPN1-AS1Q9BWJ2 59 aa3.37□□□□□ -1.87
SSBP3-207ENST00000426150 NKX6-2Q9C056 277 aaPredicted RBP3.37□□□□□ -1.87
SSBP3-207ENST00000426150 SMPXQ9UHP9 88 aa3.37□□□□□ -1.87
SSBP3-207ENST00000426150 IGKV3-7A0A075B6H7 116 aa3.36□□□□□ -1.87
SSBP3-207ENST00000426150 TRAV2A0A0B4J234 112 aa3.36□□□□□ -1.87
SSBP3-207ENST00000426150 A0A1W2PRE2 83 aa3.36□□□□□ -1.87
SSBP3-207ENST00000426150 HMGB3O15347 200 aaKnown RBP3.36□□□□□ -1.87
SSBP3-207ENST00000426150 NMBP08949 121 aa3.36□□□□□ -1.87
SSBP3-207ENST00000426150 NBEAP1P0C6P0 100 aa3.36□□□□□ -1.87
SSBP3-207ENST00000426150 IGLC2P0DOY2 106 aa3.36□□□□□ -1.87
SSBP3-207ENST00000426150 GCHFRP30047 84 aa3.36□□□□□ -1.87
SSBP3-207ENST00000426150 EMP1P54849 157 aa3.36□□□□□ -1.87
SSBP3-207ENST00000426150 UBE2L3P68036 154 aaKnown RBP3.36□□□□□ -1.87
SSBP3-207ENST00000426150 HAMPP81172 84 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms