RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 RTL8CO15255 209 aa16.54■□□□□ 0.24
VEGFA-209ENST00000425836 TNFRSF6BO95407 300 aa16.54■□□□□ 0.24
VEGFA-209ENST00000425836 C20orf78Q9BR46 151 aa16.53■□□□□ 0.24
VEGFA-209ENST00000425836 TMEM243Q9BU79 118 aa16.53■□□□□ 0.24
VEGFA-209ENST00000425836 A0A087WX48 190 aa16.52■□□□□ 0.24
VEGFA-209ENST00000425836 VCYO14598 125 aa16.52■□□□□ 0.24
VEGFA-209ENST00000425836 NPYP01303 97 aa16.52■□□□□ 0.24
VEGFA-209ENST00000425836 BTF3P20290 206 aaKnown RBP16.52■□□□□ 0.24
VEGFA-209ENST00000425836 AMTP48728 403 aa16.52■□□□□ 0.24
VEGFA-209ENST00000425836 ELOBQ15370 118 aa16.52■□□□□ 0.24
VEGFA-209ENST00000425836 CHCHD7Q9BUK0 85 aa16.52■□□□□ 0.24
VEGFA-209ENST00000425836 TGIF2-C20orf24A0A0A6YYL0 155 aa16.51■□□□□ 0.23
VEGFA-209ENST00000425836 TSHBP01222 138 aa16.51■□□□□ 0.23
VEGFA-209ENST00000425836 GAGE6Q13070 117 aa16.51■□□□□ 0.23
VEGFA-209ENST00000425836 PRELID3AQ96N28 172 aa16.51■□□□□ 0.23
VEGFA-209ENST00000425836 IBA57-AS1B1ANH7 110 aa16.51■□□□□ 0.23
VEGFA-209ENST00000425836 PHOX2AO14813 284 aa16.51■□□□□ 0.23
VEGFA-209ENST00000425836 GNB1LQ9BYB4 327 aa16.51■□□□□ 0.23
VEGFA-209ENST00000425836 PKIAP61925 76 aa16.5■□□□□ 0.23
VEGFA-209ENST00000425836 MPV17L2Q567V2 206 aa16.5■□□□□ 0.23
VEGFA-209ENST00000425836 HLA-DQA1P01909 254 aa16.49■□□□□ 0.23
VEGFA-209ENST00000425836 RPL32P62910 135 aaKnown RBP16.49■□□□□ 0.23
VEGFA-209ENST00000425836 COX19Q49B96 90 aa16.49■□□□□ 0.23
VEGFA-209ENST00000425836 APCSP02743 223 aa16.48■□□□□ 0.23
VEGFA-209ENST00000425836 Q8N976 141 aa16.47■□□□□ 0.23
VEGFA-209ENST00000425836 DNAH17Q9UFH2 4485 aa16.47■□□□□ 0.23
VEGFA-209ENST00000425836 RBX1P62877 108 aa16.47■□□□□ 0.23
VEGFA-209ENST00000425836 KIAA1644Q3SXP7 199 aa16.47■□□□□ 0.23
VEGFA-209ENST00000425836 YPEL4Q96NS1 127 aa16.47■□□□□ 0.23
VEGFA-209ENST00000425836 KLK12Q9UKR0 248 aa16.47■□□□□ 0.23
VEGFA-209ENST00000425836 LAMTOR2Q9Y2Q5 125 aa16.47■□□□□ 0.23
VEGFA-209ENST00000425836 LAGE3Q14657 143 aa16.46■□□□□ 0.23
VEGFA-209ENST00000425836 KIR2DL4Q99706 377 aa16.46■□□□□ 0.23
VEGFA-209ENST00000425836 SMIM2Q9BVW6 85 aa16.46■□□□□ 0.23
VEGFA-209ENST00000425836 UBE2L6O14933 153 aa16.45■□□□□ 0.22
VEGFA-209ENST00000425836 ESDP10768 282 aa16.45■□□□□ 0.22
VEGFA-209ENST00000425836 S100A1P23297 94 aa16.45■□□□□ 0.22
VEGFA-209ENST00000425836 Q6ZRN7 208 aaPredicted RBP16.45■□□□□ 0.22
VEGFA-209ENST00000425836 LINC00336Q6ZUF6 198 aa16.45■□□□□ 0.22
VEGFA-209ENST00000425836 FRAS1Q86XX4 4008 aa16.45■□□□□ 0.22
VEGFA-209ENST00000425836 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.44■□□□□ 0.22
VEGFA-209ENST00000425836 IGKV2-29A2NJV5 120 aaPredicted RBP16.44■□□□□ 0.22
VEGFA-209ENST00000425836 MT-ND6P03923 174 aa16.44■□□□□ 0.22
VEGFA-209ENST00000425836 FCER1GP30273 86 aa16.44■□□□□ 0.22
VEGFA-209ENST00000425836 NFE4Q86UQ8 179 aa16.44■□□□□ 0.22
VEGFA-209ENST00000425836 CBLN2Q8IUK8 224 aa16.44■□□□□ 0.22
VEGFA-209ENST00000425836 SMCO4Q9NRQ5 59 aa16.44■□□□□ 0.22
VEGFA-209ENST00000425836 PRSS47A8MTI9 375 aa16.43■□□□□ 0.22
VEGFA-209ENST00000425836 Q9HAA7 133 aa16.43■□□□□ 0.22
VEGFA-209ENST00000425836 FAT2Q9NYQ8 4349 aa16.43■□□□□ 0.22
VEGFA-209ENST00000425836 A0A1B0GUV1 79 aa16.43■□□□□ 0.22
VEGFA-209ENST00000425836 ANGP03950 147 aaKnown RBP16.43■□□□□ 0.22
VEGFA-209ENST00000425836 MRPL18Q9H0U6 180 aaKnown RBP16.43■□□□□ 0.22
VEGFA-209ENST00000425836 PRSS29PA6NIE9 313 aa16.41■□□□□ 0.22
VEGFA-209ENST00000425836 H7C423 109 aa16.41■□□□□ 0.22
VEGFA-209ENST00000425836 FABP9Q0Z7S8 132 aa16.41■□□□□ 0.22
VEGFA-209ENST00000425836 MAP1LC3AQ9H492 121 aa16.41■□□□□ 0.22
VEGFA-209ENST00000425836 IGLV4-60A0A075B6I1 120 aa16.4■□□□□ 0.22
VEGFA-209ENST00000425836 TRAV8-3A0A0A6YYJ7 113 aa16.4■□□□□ 0.22
VEGFA-209ENST00000425836 LOC389332A0A1B0GUA5 103 aa16.4■□□□□ 0.22
VEGFA-209ENST00000425836 C20orf203Q8NBC4 194 aa16.4■□□□□ 0.22
VEGFA-209ENST00000425836 UBE2WQ96B02 151 aa16.4■□□□□ 0.22
VEGFA-209ENST00000425836 TCAPO15273 167 aa16.38■□□□□ 0.21
VEGFA-209ENST00000425836 FGF6P10767 208 aa16.38■□□□□ 0.21
VEGFA-209ENST00000425836 TNP2Q05952 138 aa16.38■□□□□ 0.21
VEGFA-209ENST00000425836 ENHOQ6UWT2 76 aa16.38■□□□□ 0.21
VEGFA-209ENST00000425836 TRAPPC1Q9Y5R8 145 aa16.38■□□□□ 0.21
VEGFA-209ENST00000425836 ALKBH7Q9BT30 221 aaPredicted RBP16.38■□□□□ 0.21
VEGFA-209ENST00000425836 AMMECR1LQ6DCA0 310 aa16.37■□□□□ 0.21
VEGFA-209ENST00000425836 LINC00269Q8N2A0 174 aa16.37■□□□□ 0.21
VEGFA-209ENST00000425836 Q0VG73 95 aa16.36■□□□□ 0.21
VEGFA-209ENST00000425836 RNASEKQ6P5S7 137 aaKnown RBP16.36■□□□□ 0.21
VEGFA-209ENST00000425836 PRR34Q9NV39 138 aa16.36■□□□□ 0.21
VEGFA-209ENST00000425836 Q8N8P6 123 aa16.35■□□□□ 0.21
VEGFA-209ENST00000425836 CRPP02741 224 aa16.34■□□□□ 0.21
VEGFA-209ENST00000425836 RAB5AP20339 215 aa16.34■□□□□ 0.21
VEGFA-209ENST00000425836 ZNF25P17030 456 aaPredicted RBP16.34■□□□□ 0.21
VEGFA-209ENST00000425836 CLPSL2Q6UWE3 100 aa16.34■□□□□ 0.21
VEGFA-209ENST00000425836 MRPL52Q86TS9 123 aaKnown RBP16.34■□□□□ 0.21
VEGFA-209ENST00000425836 TM2D2Q9BX73 214 aa16.33■□□□□ 0.2
VEGFA-209ENST00000425836 IFI27P40305 119 aaPredicted RBP16.32■□□□□ 0.2
VEGFA-209ENST00000425836 REG3AQ06141 175 aa16.32■□□□□ 0.2
VEGFA-209ENST00000425836 NXT2Q9NPJ8 142 aaKnown RBP16.32■□□□□ 0.2
VEGFA-209ENST00000425836 TMEM18Q96B42 140 aa16.31■□□□□ 0.2
VEGFA-209ENST00000425836 RMI2Q96E14 147 aa16.31■□□□□ 0.2
VEGFA-209ENST00000425836 TMEM101Q96IK0 257 aa16.31■□□□□ 0.2
VEGFA-209ENST00000425836 IGKV2D-24A0A075B6R9 120 aa16.3■□□□□ 0.2
VEGFA-209ENST00000425836 A0A1B0GVY2 172 aa16.3■□□□□ 0.2
VEGFA-209ENST00000425836 PSCAO43653 123 aa16.3■□□□□ 0.2
VEGFA-209ENST00000425836 MIAQ16674 131 aa16.3■□□□□ 0.2
VEGFA-209ENST00000425836 OR5A1Q8NGJ0 315 aa16.3■□□□□ 0.2
VEGFA-209ENST00000425836 UBE2D4Q9Y2X8 147 aa16.3■□□□□ 0.2
VEGFA-209ENST00000425836 RPL39P62891 51 aaKnown RBP16.3■□□□□ 0.2
VEGFA-209ENST00000425836 COX11Q9Y6N1 276 aa16.3■□□□□ 0.2
VEGFA-209ENST00000425836 SCO1O75880 301 aa16.29■□□□□ 0.2
VEGFA-209ENST00000425836 C1orf43Q9BWL3 253 aa16.28■□□□□ 0.2
VEGFA-209ENST00000425836 CDC42SE2Q9NRR3 84 aa16.28■□□□□ 0.2
VEGFA-209ENST00000425836 CSDC2Q9Y534 153 aaKnown RBP16.28■□□□□ 0.2
VEGFA-209ENST00000425836 K7EMI3 77 aa16.27■□□□□ 0.2
VEGFA-209ENST00000425836 MAPKAPK5-AS1Q8N8E1 139 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms