RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 DEFB131AP59861 70 aa5.54□□□□□ -1.52
SMARCC1-202ENST00000425518 TIMM21Q9BVV7 248 aa5.54□□□□□ -1.52
SMARCC1-202ENST00000425518 WNK1Q9H4A3 2382 aa5.53□□□□□ -1.52
SMARCC1-202ENST00000425518 SETD2Q9BYW2 2564 aaPredicted RBP5.53□□□□□ -1.52
SMARCC1-202ENST00000425518 UTP20O75691 2785 aaKnown RBP5.53□□□□□ -1.52
SMARCC1-202ENST00000425518 TRGV11A0A075B6L2 103 aa5.53□□□□□ -1.52
SMARCC1-202ENST00000425518 ELANEP08246 267 aa5.53□□□□□ -1.52
SMARCC1-202ENST00000425518 DOPEY1Q5JWR5 2465 aa5.53□□□□□ -1.52
SMARCC1-202ENST00000425518 IGHV3-38A0A0C4DH36 116 aa5.53□□□□□ -1.52
SMARCC1-202ENST00000425518 RBMY1A1P0DJD3 496 aaKnown RBP5.53□□□□□ -1.52
SMARCC1-202ENST00000425518 RBMY1CP0DJD4 496 aa5.53□□□□□ -1.52
SMARCC1-202ENST00000425518 HOXD3P31249 432 aaPredicted RBP5.53□□□□□ -1.52
SMARCC1-202ENST00000425518 RBMY1FQ15415 496 aaKnown RBP5.53□□□□□ -1.52
SMARCC1-202ENST00000425518 DEFB136Q30KP8 78 aa5.53□□□□□ -1.52
SMARCC1-202ENST00000425518 TCTEX1D4Q5JR98 221 aa5.53□□□□□ -1.52
SMARCC1-202ENST00000425518 DUX3Q96PT4 197 aa5.53□□□□□ -1.52
SMARCC1-202ENST00000425518 ODF3Q96PU9 254 aa5.53□□□□□ -1.52
SMARCC1-202ENST00000425518 CUBNO60494 3623 aa5.53□□□□□ -1.52
SMARCC1-202ENST00000425518 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.52□□□□□ -1.53
SMARCC1-202ENST00000425518 TRAV26-1A0A087WT03 109 aa5.52□□□□□ -1.53
SMARCC1-202ENST00000425518 IGKV2-29A2NJV5 120 aaPredicted RBP5.52□□□□□ -1.53
SMARCC1-202ENST00000425518 NTN5Q8WTR8 489 aaPredicted RBP5.52□□□□□ -1.53
SMARCC1-202ENST00000425518 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.52□□□□□ -1.53
SMARCC1-202ENST00000425518 HIST2H2BDQ6DRA6 164 aa5.52□□□□□ -1.53
SMARCC1-202ENST00000425518 NDUFA12Q9UI09 145 aa5.52□□□□□ -1.53
SMARCC1-202ENST00000425518 CSMD2Q7Z408 3487 aa5.52□□□□□ -1.53
SMARCC1-202ENST00000425518 LRRK2Q5S007 2527 aa5.52□□□□□ -1.53
SMARCC1-202ENST00000425518 M0R2P5 195 aa5.52□□□□□ -1.53
SMARCC1-202ENST00000425518 ADAMTSL4-AS1Q5T5F5 129 aa5.52□□□□□ -1.53
SMARCC1-202ENST00000425518 Q6ZSN1 163 aa5.52□□□□□ -1.53
SMARCC1-202ENST00000425518 SBSPONQ8IVN8 264 aa5.52□□□□□ -1.53
SMARCC1-202ENST00000425518 PRRC2AP48634 2157 aaKnown RBP5.51□□□□□ -1.53
SMARCC1-202ENST00000425518 PRB1P04280 392 aa5.51□□□□□ -1.53
SMARCC1-202ENST00000425518 KHDC1LQ5JSQ8 128 aa5.51□□□□□ -1.53
SMARCC1-202ENST00000425518 Q6ZSV7 163 aa5.51□□□□□ -1.53
SMARCC1-202ENST00000425518 C18orf65Q6ZTR6 163 aa5.51□□□□□ -1.53
SMARCC1-202ENST00000425518 KMT2BQ9UMN6 2715 aaPredicted RBP5.51□□□□□ -1.53
SMARCC1-202ENST00000425518 SONP18583 2426 aaKnown RBP5.51□□□□□ -1.53
SMARCC1-202ENST00000425518 A0A0B4J2C4 111 aa5.51□□□□□ -1.53
SMARCC1-202ENST00000425518 SLURP1P55000 103 aa5.51□□□□□ -1.53
SMARCC1-202ENST00000425518 ATXN8Q156A1 80 aa5.51□□□□□ -1.53
SMARCC1-202ENST00000425518 ABCA12Q86UK0 2595 aa5.51□□□□□ -1.53
SMARCC1-202ENST00000425518 LINC01620Q4KN68 170 aa5.51□□□□□ -1.53
SMARCC1-202ENST00000425518 DAND5Q8N907 189 aa5.51□□□□□ -1.53
SMARCC1-202ENST00000425518 A0A0U1RRA0 63 aa5.5□□□□□ -1.53
SMARCC1-202ENST00000425518 TMEM262E9PQX1 116 aa5.5□□□□□ -1.53
SMARCC1-202ENST00000425518 TRIAP1O43715 76 aa5.5□□□□□ -1.53
SMARCC1-202ENST00000425518 CLUHP3Q96NS8 147 aa5.5□□□□□ -1.53
SMARCC1-202ENST00000425518 LINC01587Q99440 93 aa5.5□□□□□ -1.53
SMARCC1-202ENST00000425518 TEX49A0A1B0GTD5 131 aa5.5□□□□□ -1.53
SMARCC1-202ENST00000425518 IGHV1-58A0A0C4DH39 117 aa5.5□□□□□ -1.53
SMARCC1-202ENST00000425518 DGAT2L7PQ6IED9 249 aa5.5□□□□□ -1.53
SMARCC1-202ENST00000425518 TEX29Q8N6K0 151 aa5.5□□□□□ -1.53
SMARCC1-202ENST00000425518 FAM104AQ969W3 186 aa5.5□□□□□ -1.53
SMARCC1-202ENST00000425518 PRORYQ9H606 182 aa5.5□□□□□ -1.53
SMARCC1-202ENST00000425518 ANKRD17O75179 2603 aaKnown RBP5.49□□□□□ -1.53
SMARCC1-202ENST00000425518 IGHV3OR16-12A0A075B7B8 117 aa5.49□□□□□ -1.53
SMARCC1-202ENST00000425518 MRPS36P82909 103 aaKnown RBP5.49□□□□□ -1.53
SMARCC1-202ENST00000425518 ZFAND6Q6FIF0 208 aa5.49□□□□□ -1.53
SMARCC1-202ENST00000425518 LINC01356Q8N9X3 169 aa5.49□□□□□ -1.53
SMARCC1-202ENST00000425518 RNF183Q96D59 192 aa5.49□□□□□ -1.53
SMARCC1-202ENST00000425518 ZNF625Q96I27 306 aaPredicted RBP5.49□□□□□ -1.53
SMARCC1-202ENST00000425518 PYGO1Q9Y3Y4 419 aa5.49□□□□□ -1.53
SMARCC1-202ENST00000425518 MXRA5Q9NR99 2828 aa5.49□□□□□ -1.53
SMARCC1-202ENST00000425518 RBMY1BA6NDE4 496 aaKnown RBP5.49□□□□□ -1.53
SMARCC1-202ENST00000425518 RBMY1EA6NEQ0 496 aaKnown RBP5.49□□□□□ -1.53
SMARCC1-202ENST00000425518 H3BMM0 161 aa5.49□□□□□ -1.53
SMARCC1-202ENST00000425518 RBMY1DP0C7P1 496 aaKnown RBP5.49□□□□□ -1.53
SMARCC1-202ENST00000425518 C2orf82Q6UX34 121 aa5.49□□□□□ -1.53
SMARCC1-202ENST00000425518 LINC00467Q9BRT7 94 aa5.49□□□□□ -1.53
SMARCC1-202ENST00000425518 ANAPC13Q9BS18 74 aa5.49□□□□□ -1.53
SMARCC1-202ENST00000425518 CLEC2BQ92478 149 aa5.48□□□□□ -1.53
SMARCC1-202ENST00000425518 VSIG2Q96IQ7 327 aa5.48□□□□□ -1.53
SMARCC1-202ENST00000425518 LITAFQ99732 161 aa5.48□□□□□ -1.53
SMARCC1-202ENST00000425518 COX6CP09669 75 aa5.48□□□□□ -1.53
SMARCC1-202ENST00000425518 TMEM61Q8N0U2 210 aa5.48□□□□□ -1.53
SMARCC1-202ENST00000425518 UBE2E2Q96LR5 201 aa5.48□□□□□ -1.53
SMARCC1-202ENST00000425518 CHCHD7Q9BUK0 85 aa5.48□□□□□ -1.53
SMARCC1-202ENST00000425518 ICOSQ9Y6W8 199 aa5.48□□□□□ -1.53
SMARCC1-202ENST00000425518 SNCGO76070 127 aa5.48□□□□□ -1.53
SMARCC1-202ENST00000425518 GATA3P23771 443 aa5.48□□□□□ -1.53
SMARCC1-202ENST00000425518 ZNF415Q09FC8 603 aa5.48□□□□□ -1.53
SMARCC1-202ENST00000425518 CDKN2A-AS1Q9UH64 79 aa5.48□□□□□ -1.53
SMARCC1-202ENST00000425518 VPREB3Q9UKI3 123 aa5.48□□□□□ -1.53
SMARCC1-202ENST00000425518 UBE2D4Q9Y2X8 147 aa5.48□□□□□ -1.53
SMARCC1-202ENST00000425518 TRBV30A0A0K0K1B3 111 aa5.47□□□□□ -1.53
SMARCC1-202ENST00000425518 TMEM89A2RUT3 159 aa5.47□□□□□ -1.53
SMARCC1-202ENST00000425518 GAGE2BQ13066 116 aa5.47□□□□□ -1.53
SMARCC1-202ENST00000425518 GAGE2EQ4V326 116 aa5.47□□□□□ -1.53
SMARCC1-202ENST00000425518 GAGE2DQ9UEU5 116 aa5.47□□□□□ -1.53
SMARCC1-202ENST00000425518 JMJD1CQ15652 2540 aa5.47□□□□□ -1.53
SMARCC1-202ENST00000425518 TRAV8-4A0A0B4J246 113 aa5.47□□□□□ -1.53
SMARCC1-202ENST00000425518 TRBV10-2A0A0K0K1G8 114 aa5.47□□□□□ -1.53
SMARCC1-202ENST00000425518 DYNLRB2Q8TF09 96 aa5.47□□□□□ -1.53
SMARCC1-202ENST00000425518 XCL2Q9UBD3 114 aa5.47□□□□□ -1.53
SMARCC1-202ENST00000425518 TRAV4A0A0B4J268 109 aa5.47□□□□□ -1.53
SMARCC1-202ENST00000425518 TINCRA0A1B0GVN0 87 aa5.47□□□□□ -1.53
SMARCC1-202ENST00000425518 CRLF1O75462 422 aa5.47□□□□□ -1.53
SMARCC1-202ENST00000425518 MIAQ16674 131 aa5.47□□□□□ -1.53
SMARCC1-202ENST00000425518 ZNF702PQ9H963 129 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms