RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 AMTP48728 403 aa17.47■□□□□ 0.39
CDK9-202ENST00000421939 C1orf43Q9BWL3 253 aa17.47■□□□□ 0.39
CDK9-202ENST00000421939 SMIM27A0A1W2PRY6 76 aa17.46■□□□□ 0.39
CDK9-202ENST00000421939 BAALCQ8WXS3 180 aa17.46■□□□□ 0.39
CDK9-202ENST00000421939 GCSHP23434 173 aa17.45■□□□□ 0.38
CDK9-202ENST00000421939 KRTAP10-1P60331 282 aa17.45■□□□□ 0.38
CDK9-202ENST00000421939 RNF185Q96GF1 192 aa17.45■□□□□ 0.38
CDK9-202ENST00000421939 PRR34Q9NV39 138 aa17.45■□□□□ 0.38
CDK9-202ENST00000421939 SDHAF1A6NFY7 115 aa17.44■□□□□ 0.38
CDK9-202ENST00000421939 MIAQ16674 131 aa17.44■□□□□ 0.38
CDK9-202ENST00000421939 CLPSL2Q6UWE3 100 aa17.44■□□□□ 0.38
CDK9-202ENST00000421939 AMN1Q8IY45 258 aa17.44■□□□□ 0.38
CDK9-202ENST00000421939 LINC00269Q8N2A0 174 aa17.44■□□□□ 0.38
CDK9-202ENST00000421939 TRBV6-5A0A0K0K1A5 114 aa17.43■□□□□ 0.38
CDK9-202ENST00000421939 UBE2L6O14933 153 aa17.43■□□□□ 0.38
CDK9-202ENST00000421939 MRAP2Q96G30 205 aa17.43■□□□□ 0.38
CDK9-202ENST00000421939 GAS8-AS1O95177 125 aa17.42■□□□□ 0.38
CDK9-202ENST00000421939 NCR2O95944 276 aa17.42■□□□□ 0.38
CDK9-202ENST00000421939 RAB4AP20338 218 aa17.42■□□□□ 0.38
CDK9-202ENST00000421939 CLLU1Q5K131 121 aa17.42■□□□□ 0.38
CDK9-202ENST00000421939 PCLOQ9Y6V0 5065 aa17.42■□□□□ 0.38
CDK9-202ENST00000421939 A0A1B0GUV1 79 aa17.41■□□□□ 0.38
CDK9-202ENST00000421939 C20orf203Q8NBC4 194 aa17.41■□□□□ 0.38
CDK9-202ENST00000421939 IGLV4-60A0A075B6I1 120 aa17.39■□□□□ 0.37
CDK9-202ENST00000421939 APCSP02743 223 aa17.39■□□□□ 0.37
CDK9-202ENST00000421939 ST20Q9HBF5 79 aa17.39■□□□□ 0.37
CDK9-202ENST00000421939 IGLV2-33A0A075B6J2 118 aaPredicted RBP17.38■□□□□ 0.37
CDK9-202ENST00000421939 I3L3M4 83 aa17.38■□□□□ 0.37
CDK9-202ENST00000421939 RPS10P46783 165 aaKnown RBP17.38■□□□□ 0.37
CDK9-202ENST00000421939 REG3AQ06141 175 aa17.38■□□□□ 0.37
CDK9-202ENST00000421939 TMEM70Q9BUB7 260 aa17.38■□□□□ 0.37
CDK9-202ENST00000421939 A0A1B0GW15 77 aa17.37■□□□□ 0.37
CDK9-202ENST00000421939 PMCHP20382 165 aa17.37■□□□□ 0.37
CDK9-202ENST00000421939 ABCA13Q86UQ4 5058 aa17.37■□□□□ 0.37
CDK9-202ENST00000421939 HLA-DQA1P01909 254 aa17.36■□□□□ 0.37
CDK9-202ENST00000421939 CAMPP49913 170 aa17.36■□□□□ 0.37
CDK9-202ENST00000421939 IFITM2Q01629 132 aa17.36■□□□□ 0.37
CDK9-202ENST00000421939 PNRC1Q12796 327 aaPredicted RBP17.36■□□□□ 0.37
CDK9-202ENST00000421939 SMKR1H3BMG3 65 aa17.35■□□□□ 0.37
CDK9-202ENST00000421939 FAM104BQ5XKR9 115 aa17.35■□□□□ 0.37
CDK9-202ENST00000421939 PPP1R2P9O14990 202 aa17.34■□□□□ 0.37
CDK9-202ENST00000421939 MRPL54Q6P161 138 aaKnown RBP17.34■□□□□ 0.37
CDK9-202ENST00000421939 KRTAP17-1Q9BYP8 105 aa17.34■□□□□ 0.37
CDK9-202ENST00000421939 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.33■□□□□ 0.36
CDK9-202ENST00000421939 IGKV2-29A2NJV5 120 aaPredicted RBP17.33■□□□□ 0.36
CDK9-202ENST00000421939 PPP1R17O96001 155 aa17.33■□□□□ 0.36
CDK9-202ENST00000421939 TSHBP01222 138 aa17.33■□□□□ 0.36
CDK9-202ENST00000421939 POLR2KP53803 58 aaKnown RBP17.33■□□□□ 0.36
CDK9-202ENST00000421939 XGP55808 180 aa17.33■□□□□ 0.36
CDK9-202ENST00000421939 HBBP68871 147 aa17.33■□□□□ 0.36
CDK9-202ENST00000421939 C14orf177Q52M58 125 aa17.33■□□□□ 0.36
CDK9-202ENST00000421939 TMEM242Q9NWH2 141 aa17.33■□□□□ 0.36
CDK9-202ENST00000421939 TRBV27A0A0K0K1C4 114 aa17.32■□□□□ 0.36
CDK9-202ENST00000421939 H7C423 109 aa17.32■□□□□ 0.36
CDK9-202ENST00000421939 S100A8P05109 93 aa17.32■□□□□ 0.36
CDK9-202ENST00000421939 MRPL51Q4U2R6 128 aaKnown RBP17.32■□□□□ 0.36
CDK9-202ENST00000421939 AMMECR1LQ6DCA0 310 aa17.32■□□□□ 0.36
CDK9-202ENST00000421939 KRTAP26-1Q6PEX3 210 aa17.32■□□□□ 0.36
CDK9-202ENST00000421939 NRACQ8N912 160 aa17.32■□□□□ 0.36
CDK9-202ENST00000421939 IGLV10-54A0A075B6I4 117 aa17.31■□□□□ 0.36
CDK9-202ENST00000421939 TRAV8-4A0A0B4J246 113 aa17.31■□□□□ 0.36
CDK9-202ENST00000421939 A0A1B0GXF2 115 aa17.31■□□□□ 0.36
CDK9-202ENST00000421939 Q8N1X5 172 aa17.31■□□□□ 0.36
CDK9-202ENST00000421939 USP17L23D6RBM5 183 aa17.3■□□□□ 0.36
CDK9-202ENST00000421939 FGF6P10767 208 aa17.3■□□□□ 0.36
CDK9-202ENST00000421939 RNASEKQ6P5S7 137 aaKnown RBP17.3■□□□□ 0.36
CDK9-202ENST00000421939 KRTAP4-5Q9BYR2 181 aa17.3■□□□□ 0.36
CDK9-202ENST00000421939 DNAH8Q96JB1 4490 aa17.29■□□□□ 0.36
CDK9-202ENST00000421939 F8W036 122 aa17.29■□□□□ 0.36
CDK9-202ENST00000421939 ESDP10768 282 aa17.29■□□□□ 0.36
CDK9-202ENST00000421939 SUMO2P61956 95 aaKnown RBP17.29■□□□□ 0.36
CDK9-202ENST00000421939 MT-ND4LP03901 98 aa17.28■□□□□ 0.36
CDK9-202ENST00000421939 ATP5L2Q7Z4Y8 100 aa17.28■□□□□ 0.36
CDK9-202ENST00000421939 LINC00862A6NCI5 91 aa17.27■□□□□ 0.36
CDK9-202ENST00000421939 VCYO14598 125 aa17.27■□□□□ 0.36
CDK9-202ENST00000421939 ZNF25P17030 456 aaPredicted RBP17.27■□□□□ 0.36
CDK9-202ENST00000421939 UQCC3Q6UW78 93 aa17.27■□□□□ 0.36
CDK9-202ENST00000421939 CKS2P33552 79 aa17.26■□□□□ 0.35
CDK9-202ENST00000421939 ANAPC16Q96DE5 110 aa17.26■□□□□ 0.35
CDK9-202ENST00000421939 FAT1Q14517 4588 aa17.24■□□□□ 0.35
CDK9-202ENST00000421939 C7orf77A4D0Y5 90 aa17.24■□□□□ 0.35
CDK9-202ENST00000421939 FCER1GP30273 86 aa17.24■□□□□ 0.35
CDK9-202ENST00000421939 LINC01620Q4KN68 170 aa17.24■□□□□ 0.35
CDK9-202ENST00000421939 BTF3L4Q96K17 158 aa17.24■□□□□ 0.35
CDK9-202ENST00000421939 IGKV3OR2-268A0A0C4DH90 116 aa17.23■□□□□ 0.35
CDK9-202ENST00000421939 HAMPP81172 84 aa17.23■□□□□ 0.35
CDK9-202ENST00000421939 TMEM101Q96IK0 257 aa17.23■□□□□ 0.35
CDK9-202ENST00000421939 FAM30AQ9NZY2 134 aa17.23■□□□□ 0.35
CDK9-202ENST00000421939 D6R8Y8 96 aa17.22■□□□□ 0.35
CDK9-202ENST00000421939 ADCYAP1P18509 176 aa17.22■□□□□ 0.35
CDK9-202ENST00000421939 KIR2DL4Q99706 377 aa17.22■□□□□ 0.35
CDK9-202ENST00000421939 C20orf78Q9BR46 151 aa17.22■□□□□ 0.35
CDK9-202ENST00000421939 TRBV24-1A0A075B6N3 115 aa17.21■□□□□ 0.35
CDK9-202ENST00000421939 TMEM218A2RU14 115 aa17.21■□□□□ 0.35
CDK9-202ENST00000421939 PRSS1P07477 247 aa17.21■□□□□ 0.35
CDK9-202ENST00000421939 Q6ZSA8 131 aa17.21■□□□□ 0.35
CDK9-202ENST00000421939 OR5A1Q8NGJ0 315 aa17.21■□□□□ 0.35
CDK9-202ENST00000421939 TNFRSF6BO95407 300 aa17.2■□□□□ 0.34
CDK9-202ENST00000421939 RPL32P62910 135 aaKnown RBP17.2■□□□□ 0.34
CDK9-202ENST00000421939 MRPL52Q86TS9 123 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms