RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 SORL1Q92673 2214 aa13.4□□□□□ -0.26
PPFIA3-202ENST00000421230 IGIPA6NJ69 53 aa13.4□□□□□ -0.26
PPFIA3-202ENST00000421230 TEN1Q86WV5 123 aa13.4□□□□□ -0.26
PPFIA3-202ENST00000421230 TMEM61Q8N0U2 210 aa13.4□□□□□ -0.26
PPFIA3-202ENST00000421230 PTH2Q96A98 100 aa13.4□□□□□ -0.26
PPFIA3-202ENST00000421230 PF4P02776 101 aa13.39□□□□□ -0.27
PPFIA3-202ENST00000421230 MT-ATP8P03928 68 aa13.39□□□□□ -0.27
PPFIA3-202ENST00000421230 RNASE3P12724 160 aaKnown RBP13.39□□□□□ -0.27
PPFIA3-202ENST00000421230 DEFB114Q30KQ6 69 aa13.39□□□□□ -0.27
PPFIA3-202ENST00000421230 SFTA2Q6UW10 78 aa13.39□□□□□ -0.27
PPFIA3-202ENST00000421230 APRG1Q8IVJ8 170 aa13.39□□□□□ -0.27
PPFIA3-202ENST00000421230 OR10J6PQ8NGY7 276 aa13.39□□□□□ -0.27
PPFIA3-202ENST00000421230 GEMIN7Q9H840 131 aaKnown RBP13.39□□□□□ -0.27
PPFIA3-202ENST00000421230 TRBV20-1A0A075B6N2 111 aa13.39□□□□□ -0.27
PPFIA3-202ENST00000421230 NXPH4O95158 308 aa13.39□□□□□ -0.27
PPFIA3-202ENST00000421230 LINC00315P59091 139 aa13.39□□□□□ -0.27
PPFIA3-202ENST00000421230 HERVK_113P61574 105 aa13.39□□□□□ -0.27
PPFIA3-202ENST00000421230 Q6ZUT4 128 aa13.39□□□□□ -0.27
PPFIA3-202ENST00000421230 KIF25-AS1Q9Y6Z4 181 aa13.39□□□□□ -0.27
PPFIA3-202ENST00000421230 TCL1BO95988 128 aa13.38□□□□□ -0.27
PPFIA3-202ENST00000421230 IGHV3-30P01768 117 aa13.38□□□□□ -0.27
PPFIA3-202ENST00000421230 IGHV3-30-5P0DP03 117 aa13.38□□□□□ -0.27
PPFIA3-202ENST00000421230 VCX2Q9H322 139 aa13.38□□□□□ -0.27
PPFIA3-202ENST00000421230 F6UB75 175 aa13.37□□□□□ -0.27
PPFIA3-202ENST00000421230 K7EQG2 157 aa13.37□□□□□ -0.27
PPFIA3-202ENST00000421230 GNRH2O43555 120 aa13.37□□□□□ -0.27
PPFIA3-202ENST00000421230 ZNF688P0C7X2 276 aa13.37□□□□□ -0.27
PPFIA3-202ENST00000421230 CFC1BP0CG36 223 aa13.37□□□□□ -0.27
PPFIA3-202ENST00000421230 CFC1P0CG37 223 aa13.37□□□□□ -0.27
PPFIA3-202ENST00000421230 XGP55808 180 aa13.37□□□□□ -0.27
PPFIA3-202ENST00000421230 PMVKQ15126 192 aa13.37□□□□□ -0.27
PPFIA3-202ENST00000421230 SLC25A29Q8N8R3 303 aa13.37□□□□□ -0.27
PPFIA3-202ENST00000421230 ID1P41134 155 aa13.37□□□□□ -0.27
PPFIA3-202ENST00000421230 POLR2KP53803 58 aaKnown RBP13.36□□□□□ -0.27
PPFIA3-202ENST00000421230 TP53TG1Q9Y2A0 90 aa13.36□□□□□ -0.27
PPFIA3-202ENST00000421230 TRRAPQ9Y4A5 3859 aa13.36□□□□□ -0.27
PPFIA3-202ENST00000421230 STAB1Q9NY15 2570 aa13.36□□□□□ -0.27
PPFIA3-202ENST00000421230 RNASE4P34096 147 aaKnown RBP13.36□□□□□ -0.27
PPFIA3-202ENST00000421230 C10orf126Q8N4M7 172 aa13.36□□□□□ -0.27
PPFIA3-202ENST00000421230 LINC00482Q8N8I6 264 aa13.36□□□□□ -0.27
PPFIA3-202ENST00000421230 TMEM141Q96I45 108 aa13.36□□□□□ -0.27
PPFIA3-202ENST00000421230 TSPEAR-AS2P59090 65 aa13.35□□□□□ -0.27
PPFIA3-202ENST00000421230 SPATA3Q8NHX4 192 aa13.35□□□□□ -0.27
PPFIA3-202ENST00000421230 AMELXQ99217 191 aa13.35□□□□□ -0.27
PPFIA3-202ENST00000421230 TRBV7-9A0A0J9YWB2 115 aa13.35□□□□□ -0.27
PPFIA3-202ENST00000421230 SHISA2Q6UWI4 295 aa13.35□□□□□ -0.27
PPFIA3-202ENST00000421230 A8MWV9 139 aa13.34□□□□□ -0.27
PPFIA3-202ENST00000421230 EMP1P54849 157 aa13.34□□□□□ -0.27
PPFIA3-202ENST00000421230 TIMM17AQ99595 171 aa13.34□□□□□ -0.27
PPFIA3-202ENST00000421230 SNRPD3P62318 126 aaKnown RBP13.33□□□□□ -0.27
PPFIA3-202ENST00000421230 COL6A5A8TX70 2615 aa13.33□□□□□ -0.28
PPFIA3-202ENST00000421230 ZNF876PQ49A33 203 aa13.32□□□□□ -0.28
PPFIA3-202ENST00000421230 ZNRF2Q8NHG8 242 aa13.32□□□□□ -0.28
PPFIA3-202ENST00000421230 PRO1854Q9UHT4 67 aa13.32□□□□□ -0.28
PPFIA3-202ENST00000421230 VCYO14598 125 aa13.32□□□□□ -0.28
PPFIA3-202ENST00000421230 RPL39P62891 51 aaKnown RBP13.32□□□□□ -0.28
PPFIA3-202ENST00000421230 M0QXV9 152 aa13.31□□□□□ -0.28
PPFIA3-202ENST00000421230 SUMO4Q6EEV6 95 aa13.31□□□□□ -0.28
PPFIA3-202ENST00000421230 ANKRD29Q8N6D5 301 aa13.31□□□□□ -0.28
PPFIA3-202ENST00000421230 TMEM170BQ5T4T1 132 aa13.3□□□□□ -0.28
PPFIA3-202ENST00000421230 C3orf56Q8N813 242 aa13.3□□□□□ -0.28
PPFIA3-202ENST00000421230 ZNF256Q9Y2P7 627 aaPredicted RBP13.3□□□□□ -0.28
PPFIA3-202ENST00000421230 NOTCH3Q9UM47 2321 aa13.3□□□□□ -0.28
PPFIA3-202ENST00000421230 J3QQQ9 107 aa13.29□□□□□ -0.28
PPFIA3-202ENST00000421230 KIR2DL4Q99706 377 aa13.29□□□□□ -0.28
PPFIA3-202ENST00000421230 TRAV25A0A0B4J276 109 aa13.29□□□□□ -0.28
PPFIA3-202ENST00000421230 IGLV1-51P01701 117 aa13.29□□□□□ -0.28
PPFIA3-202ENST00000421230 DEFB131AP59861 70 aa13.29□□□□□ -0.28
PPFIA3-202ENST00000421230 FAM110AQ9BQ89 295 aa13.29□□□□□ -0.28
PPFIA3-202ENST00000421230 ERG28Q9UKR5 140 aa13.29□□□□□ -0.28
PPFIA3-202ENST00000421230 JPT2Q9H910 190 aa13.28□□□□□ -0.28
PPFIA3-202ENST00000421230 TRAV2A0A0B4J234 112 aa13.28□□□□□ -0.28
PPFIA3-202ENST00000421230 TRBV6-5A0A0K0K1A5 114 aa13.28□□□□□ -0.28
PPFIA3-202ENST00000421230 TRBV27A0A0K0K1C4 114 aa13.28□□□□□ -0.28
PPFIA3-202ENST00000421230 KLLNB2CW77 178 aa13.28□□□□□ -0.28
PPFIA3-202ENST00000421230 TMEM262E9PQX1 116 aa13.28□□□□□ -0.28
PPFIA3-202ENST00000421230 IGKV3-20P01619 116 aa13.28□□□□□ -0.28
PPFIA3-202ENST00000421230 SCGB1C2P0DMR2 95 aa13.28□□□□□ -0.28
PPFIA3-202ENST00000421230 MUC4Q99102 2169 aa13.27□□□□□ -0.28
PPFIA3-202ENST00000421230 EIF4EBP3O60516 100 aaPredicted RBP13.27□□□□□ -0.28
PPFIA3-202ENST00000421230 A0A0J9YX75 114 aa13.27□□□□□ -0.29
PPFIA3-202ENST00000421230 SDHAF1A6NFY7 115 aa13.27□□□□□ -0.29
PPFIA3-202ENST00000421230 DEFB104AQ8WTQ1 72 aa13.27□□□□□ -0.29
PPFIA3-202ENST00000421230 MAP6D1Q9H9H5 199 aa13.27□□□□□ -0.29
PPFIA3-202ENST00000421230 KNCNA6PVL3 124 aa13.26□□□□□ -0.29
PPFIA3-202ENST00000421230 IGHV3-33P01772 117 aa13.26□□□□□ -0.29
PPFIA3-202ENST00000421230 LGALS3P17931 250 aaKnown RBP13.26□□□□□ -0.29
PPFIA3-202ENST00000421230 TMEM263Q8WUH6 116 aaKnown RBP13.26□□□□□ -0.29
PPFIA3-202ENST00000421230 A4D1N5 150 aa13.25□□□□□ -0.29
PPFIA3-202ENST00000421230 LEPROTO15243 131 aa13.25□□□□□ -0.29
PPFIA3-202ENST00000421230 SLC25A20O43772 301 aa13.25□□□□□ -0.29
PPFIA3-202ENST00000421230 RNF183Q96D59 192 aa13.25□□□□□ -0.29
PPFIA3-202ENST00000421230 A0A087WWL8 130 aa13.24□□□□□ -0.29
PPFIA3-202ENST00000421230 A0A0B4J2C4 111 aa13.24□□□□□ -0.29
PPFIA3-202ENST00000421230 TMEM223A0PJW6 202 aa13.24□□□□□ -0.29
PPFIA3-202ENST00000421230 P0DMU3 169 aa13.24□□□□□ -0.29
PPFIA3-202ENST00000421230 FAM231AP0DMU4 169 aa13.24□□□□□ -0.29
PPFIA3-202ENST00000421230 FAM231CP0DMU5 169 aa13.24□□□□□ -0.29
PPFIA3-202ENST00000421230 ODF3L2Q3SX64 289 aa13.24□□□□□ -0.29
PPFIA3-202ENST00000421230 FAM159AQ6UWV7 190 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms