RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 BIN3Q9NQY0 253 aa11.2□□□□□ -0.62
MSH6-203ENST00000420813 TRAV8-4A0A0B4J246 113 aa11.19□□□□□ -0.62
MSH6-203ENST00000420813 A0A1B0GUV1 79 aa11.19□□□□□ -0.62
MSH6-203ENST00000420813 P01737 135 aa11.19□□□□□ -0.62
MSH6-203ENST00000420813 TRGC1P0CF51 173 aa11.19□□□□□ -0.62
MSH6-203ENST00000420813 BCL2P10415 239 aa11.19□□□□□ -0.62
MSH6-203ENST00000420813 RASL11AQ6T310 242 aa11.19□□□□□ -0.62
MSH6-203ENST00000420813 PGLYRP4Q96LB8 373 aa11.19□□□□□ -0.62
MSH6-203ENST00000420813 EIF5A2Q9GZV4 153 aaKnown RBP11.19□□□□□ -0.62
MSH6-203ENST00000420813 FAT3Q8TDW7 4589 aa11.19□□□□□ -0.62
MSH6-203ENST00000420813 C20orf203Q8NBC4 194 aa11.18□□□□□ -0.62
MSH6-203ENST00000420813 TMEM243Q9BU79 118 aa11.18□□□□□ -0.62
MSH6-203ENST00000420813 DPH3P1Q9H4G8 78 aa11.18□□□□□ -0.62
MSH6-203ENST00000420813 TRBV20OR9-2A0A075B6H5 130 aa11.17□□□□□ -0.62
MSH6-203ENST00000420813 TMEM218A2RU14 115 aa11.17□□□□□ -0.62
MSH6-203ENST00000420813 RPL37AP61513 92 aaKnown RBP11.17□□□□□ -0.62
MSH6-203ENST00000420813 SERTAD4-AS1Q5TG53 156 aa11.17□□□□□ -0.62
MSH6-203ENST00000420813 WDR73Q6P4I2 378 aa11.17□□□□□ -0.62
MSH6-203ENST00000420813 NIT2Q9NQR4 276 aa11.17□□□□□ -0.62
MSH6-203ENST00000420813 CNBPP62633 177 aaKnown RBP11.16□□□□□ -0.62
MSH6-203ENST00000420813 SRSF3P84103 164 aaKnown RBP11.16□□□□□ -0.62
MSH6-203ENST00000420813 LYZL1Q6UWQ5 148 aa11.16□□□□□ -0.62
MSH6-203ENST00000420813 SDIM1Q6ZPB5 146 aa11.16□□□□□ -0.62
MSH6-203ENST00000420813 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.16□□□□□ -0.62
MSH6-203ENST00000420813 PKHD1L1Q86WI1 4243 aa11.16□□□□□ -0.62
MSH6-203ENST00000420813 IGLV10-54A0A075B6I4 117 aa11.15□□□□□ -0.62
MSH6-203ENST00000420813 NDUFS6O75380 124 aaKnown RBP11.15□□□□□ -0.62
MSH6-203ENST00000420813 NTF3P20783 257 aa11.15□□□□□ -0.62
MSH6-203ENST00000420813 CTRLP40313 264 aa11.15□□□□□ -0.62
MSH6-203ENST00000420813 SEC11CQ9BY50 192 aa11.15□□□□□ -0.62
MSH6-203ENST00000420813 CARHSP1Q9Y2V2 147 aaKnown RBP11.15□□□□□ -0.62
MSH6-203ENST00000420813 IGLV4-60A0A075B6I1 120 aa11.14□□□□□ -0.63
MSH6-203ENST00000420813 F8W036 122 aa11.14□□□□□ -0.63
MSH6-203ENST00000420813 CNFNQ9BYD5 112 aa11.14□□□□□ -0.63
MSH6-203ENST00000420813 hDV102S1A0JD36 115 aa11.13□□□□□ -0.63
MSH6-203ENST00000420813 ADCYAP1P18509 176 aa11.13□□□□□ -0.63
MSH6-203ENST00000420813 CIRBPQ14011 172 aaKnown RBP11.13□□□□□ -0.63
MSH6-203ENST00000420813 COTL1Q14019 142 aa11.13□□□□□ -0.63
MSH6-203ENST00000420813 NUDT10Q8NFP7 164 aa11.13□□□□□ -0.63
MSH6-203ENST00000420813 NUDT11Q96G61 164 aa11.13□□□□□ -0.63
MSH6-203ENST00000420813 PANO1I0J062 215 aa11.12□□□□□ -0.63
MSH6-203ENST00000420813 UBE2L6O14933 153 aa11.12□□□□□ -0.63
MSH6-203ENST00000420813 AMTP48728 403 aa11.12□□□□□ -0.63
MSH6-203ENST00000420813 C10orf91Q5T1B1 145 aa11.12□□□□□ -0.63
MSH6-203ENST00000420813 GFRA4Q9GZZ7 299 aa11.12□□□□□ -0.63
MSH6-203ENST00000420813 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.11□□□□□ -0.63
MSH6-203ENST00000420813 APOC3P02656 99 aa11.11□□□□□ -0.63
MSH6-203ENST00000420813 SRP19P09132 144 aaKnown RBP11.11□□□□□ -0.63
MSH6-203ENST00000420813 SVBPQ8N300 66 aa11.11□□□□□ -0.63
MSH6-203ENST00000420813 AP5S1Q9NUS5 200 aa11.11□□□□□ -0.63
MSH6-203ENST00000420813 IGHV3-64A0A075B6Q5 118 aa11.1□□□□□ -0.63
MSH6-203ENST00000420813 C9JQL5 133 aa11.1□□□□□ -0.63
MSH6-203ENST00000420813 TWIST1Q15672 202 aa11.1□□□□□ -0.63
MSH6-203ENST00000420813 RPP21Q9H633 154 aaKnown RBP11.1□□□□□ -0.63
MSH6-203ENST00000420813 TMEM250H0YL14 139 aa11.09□□□□□ -0.63
MSH6-203ENST00000420813 HNRNPA3P51991 378 aaKnown RBP11.09□□□□□ -0.63
MSH6-203ENST00000420813 GATD1Q8NB37 220 aa11.09□□□□□ -0.63
MSH6-203ENST00000420813 RNF185Q96GF1 192 aa11.09□□□□□ -0.63
MSH6-203ENST00000420813 HMCN2Q8NDA2 5059 aa11.08□□□□□ -0.64
MSH6-203ENST00000420813 SNAPINO95295 136 aa11.08□□□□□ -0.64
MSH6-203ENST00000420813 K7EN84 100 aa11.07□□□□□ -0.64
MSH6-203ENST00000420813 NCR2O95944 276 aa11.07□□□□□ -0.64
MSH6-203ENST00000420813 SLPIP03973 132 aa11.07□□□□□ -0.64
MSH6-203ENST00000420813 CFAP161Q6P656 301 aa11.07□□□□□ -0.64
MSH6-203ENST00000420813 OCC1Q8TAD7 63 aa11.07□□□□□ -0.64
MSH6-203ENST00000420813 RNASE7Q9H1E1 156 aaKnown RBP11.07□□□□□ -0.64
MSH6-203ENST00000420813 CEBPGP53567 150 aa11.06□□□□□ -0.64
MSH6-203ENST00000420813 TRAV26-2A0A0B4J265 109 aa11.05□□□□□ -0.64
MSH6-203ENST00000420813 H7C423 109 aa11.05□□□□□ -0.64
MSH6-203ENST00000420813 SMIM15Q7Z3B0 74 aa11.05□□□□□ -0.64
MSH6-203ENST00000420813 C15orf56Q8N910 161 aa11.05□□□□□ -0.64
MSH6-203ENST00000420813 SPACA4Q8TDM5 124 aa11.05□□□□□ -0.64
MSH6-203ENST00000420813 GTSF1Q8WW33 167 aa11.05□□□□□ -0.64
MSH6-203ENST00000420813 A0A087WYN8 130 aa11.04□□□□□ -0.64
MSH6-203ENST00000420813 GAGE12HA6NDE8 117 aa11.04□□□□□ -0.64
MSH6-203ENST00000420813 FAM74A3Q4VXF1 159 aa11.04□□□□□ -0.64
MSH6-203ENST00000420813 AMMECR1LQ6DCA0 310 aa11.04□□□□□ -0.64
MSH6-203ENST00000420813 APCSP02743 223 aa11.03□□□□□ -0.64
MSH6-203ENST00000420813 PNRC1Q12796 327 aaPredicted RBP11.03□□□□□ -0.64
MSH6-203ENST00000420813 Q6ZRU5 148 aa11.03□□□□□ -0.64
MSH6-203ENST00000420813 RPL39LQ96EH5 51 aaKnown RBP11.03□□□□□ -0.64
MSH6-203ENST00000420813 DPH3Q96FX2 82 aa11.03□□□□□ -0.64
MSH6-203ENST00000420813 SMIM7Q9BQ49 75 aa11.03□□□□□ -0.64
MSH6-203ENST00000420813 PLA2G2DQ9UNK4 145 aa11.03□□□□□ -0.64
MSH6-203ENST00000420813 CHTF8P0CG12 524 aa11.02□□□□□ -0.65
MSH6-203ENST00000420813 RHEBQ15382 184 aa11.02□□□□□ -0.65
MSH6-203ENST00000420813 FAM231DQ6ZW35 169 aa11.02□□□□□ -0.65
MSH6-203ENST00000420813 PLAC8Q9NZF1 115 aa11.02□□□□□ -0.65
MSH6-203ENST00000420813 IGKV3OR2-268A0A0C4DH90 116 aa11.01□□□□□ -0.65
MSH6-203ENST00000420813 SDHAF1A6NFY7 115 aa11.01□□□□□ -0.65
MSH6-203ENST00000420813 ZNF727A8MUV8 499 aa11.01□□□□□ -0.65
MSH6-203ENST00000420813 A8MWL6 223 aa11.01□□□□□ -0.65
MSH6-203ENST00000420813 GATCO43716 136 aaKnown RBP11.01□□□□□ -0.65
MSH6-203ENST00000420813 RPS10P46783 165 aaKnown RBP11.01□□□□□ -0.65
MSH6-203ENST00000420813 RNASEKQ6P5S7 137 aaKnown RBP11.01□□□□□ -0.65
MSH6-203ENST00000420813 CHCHD10Q8WYQ3 142 aaPredicted RBP11.01□□□□□ -0.65
MSH6-203ENST00000420813 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11□□□□□ -0.65
MSH6-203ENST00000420813 TRBV6-5A0A0K0K1A5 114 aa11□□□□□ -0.65
MSH6-203ENST00000420813 IGKV2-29A2NJV5 120 aaPredicted RBP11□□□□□ -0.65
MSH6-203ENST00000420813 FGF6P10767 208 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms