RNA–Protein interactions for RNA: ENST00000419308.6

FOXA2-202, Transcript of forkhead box A2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FOXA2, Length 2,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-202ENST00000419308 LEPROTO15243 131 aa19.27■□□□□ 0.68
FOXA2-202ENST00000419308 MRPL16Q9NX20 251 aaKnown RBP19.27■□□□□ 0.68
FOXA2-202ENST00000419308 A0A1W2PRX2 142 aa19.26■□□□□ 0.67
FOXA2-202ENST00000419308 IGHV3-30P01768 117 aa19.26■□□□□ 0.67
FOXA2-202ENST00000419308 IGHV3-30-5P0DP03 117 aa19.26■□□□□ 0.67
FOXA2-202ENST00000419308 WNK1Q9H4A3 2382 aa19.26■□□□□ 0.67
FOXA2-202ENST00000419308 FHL3Q13643 280 aa19.26■□□□□ 0.67
FOXA2-202ENST00000419308 SPXQ9BT56 116 aa19.26■□□□□ 0.67
FOXA2-202ENST00000419308 F8W1H4 67 aa19.25■□□□□ 0.67
FOXA2-202ENST00000419308 BEAN1Q3B7T3 259 aa19.25■□□□□ 0.67
FOXA2-202ENST00000419308 CEMP1Q6PRD7 247 aaPredicted RBP19.25■□□□□ 0.67
FOXA2-202ENST00000419308 XCL2Q9UBD3 114 aa19.25■□□□□ 0.67
FOXA2-202ENST00000419308 CLUHP3Q96NS8 147 aa19.25■□□□□ 0.67
FOXA2-202ENST00000419308 CUBNO60494 3623 aa19.25■□□□□ 0.67
FOXA2-202ENST00000419308 TENM4Q6N022 2769 aa19.24■□□□□ 0.67
FOXA2-202ENST00000419308 IGHV3-64A0A075B6Q5 118 aa19.24■□□□□ 0.67
FOXA2-202ENST00000419308 TRAV25A0A0B4J276 109 aa19.24■□□□□ 0.67
FOXA2-202ENST00000419308 RPL24P83731 157 aaKnown RBP19.24■□□□□ 0.67
FOXA2-202ENST00000419308 IGHV3-53P01767 116 aa19.23■□□□□ 0.67
FOXA2-202ENST00000419308 APOMO95445 188 aa19.23■□□□□ 0.67
FOXA2-202ENST00000419308 WFDC2Q14508 124 aa19.23■□□□□ 0.67
FOXA2-202ENST00000419308 CHCHD7Q9BUK0 85 aa19.23■□□□□ 0.67
FOXA2-202ENST00000419308 TEX48A0A1B0GUV7 120 aa19.22■□□□□ 0.67
FOXA2-202ENST00000419308 CCL24O00175 119 aa19.22■□□□□ 0.67
FOXA2-202ENST00000419308 AZU1P20160 251 aa19.22■□□□□ 0.67
FOXA2-202ENST00000419308 CRYBA4P53673 196 aa19.22■□□□□ 0.67
FOXA2-202ENST00000419308 HIST2H2BCQ6DN03 193 aa19.22■□□□□ 0.67
FOXA2-202ENST00000419308 NDUFA11Q86Y39 141 aa19.22■□□□□ 0.67
FOXA2-202ENST00000419308 TSPAN13O95857 204 aa19.21■□□□□ 0.67
FOXA2-202ENST00000419308 RS1O15537 224 aa19.21■□□□□ 0.67
FOXA2-202ENST00000419308 MRPS36P82909 103 aaKnown RBP19.21■□□□□ 0.67
FOXA2-202ENST00000419308 STHQ8IWL8 128 aa19.21■□□□□ 0.67
FOXA2-202ENST00000419308 RNASE13Q5GAN3 156 aaKnown RBP19.2■□□□□ 0.66
FOXA2-202ENST00000419308 GAGE13Q4V321 117 aa19.19■□□□□ 0.66
FOXA2-202ENST00000419308 C1orf158Q8N1D5 194 aa19.19■□□□□ 0.66
FOXA2-202ENST00000419308 DNAJC30Q96LL9 226 aa19.19■□□□□ 0.66
FOXA2-202ENST00000419308 PRO0461Q9UI25 63 aa19.19■□□□□ 0.66
FOXA2-202ENST00000419308 UBE2D4Q9Y2X8 147 aa19.19■□□□□ 0.66
FOXA2-202ENST00000419308 CFC1BP0CG36 223 aa19.18■□□□□ 0.66
FOXA2-202ENST00000419308 CFC1P0CG37 223 aa19.18■□□□□ 0.66
FOXA2-202ENST00000419308 IGHV3-38A0A0C4DH36 116 aa19.17■□□□□ 0.66
FOXA2-202ENST00000419308 SPANXA1Q9NS26 97 aa19.17■□□□□ 0.66
FOXA2-202ENST00000419308 IGHV3OR16-12A0A075B7B8 117 aa19.17■□□□□ 0.66
FOXA2-202ENST00000419308 MTURNQ8N3F0 131 aa19.17■□□□□ 0.66
FOXA2-202ENST00000419308 CITED2Q99967 270 aaPredicted RBP19.17■□□□□ 0.66
FOXA2-202ENST00000419308 IGKV2D-29A0A075B6S2 120 aaPredicted RBP19.16■□□□□ 0.66
FOXA2-202ENST00000419308 IGKV2-29A2NJV5 120 aaPredicted RBP19.16■□□□□ 0.66
FOXA2-202ENST00000419308 SETD2Q9BYW2 2564 aaPredicted RBP19.16■□□□□ 0.66
FOXA2-202ENST00000419308 SFTA2Q6UW10 78 aa19.16■□□□□ 0.66
FOXA2-202ENST00000419308 IGHV3-30-3P0DP02 117 aa19.15■□□□□ 0.66
FOXA2-202ENST00000419308 C10orf126Q8N4M7 172 aa19.15■□□□□ 0.66
FOXA2-202ENST00000419308 KRTAP1-1Q07627 177 aa19.14■□□□□ 0.66
FOXA2-202ENST00000419308 TIMM21Q9BVV7 248 aa19.14■□□□□ 0.66
FOXA2-202ENST00000419308 PDZD2O15018 2839 aa19.14■□□□□ 0.65
FOXA2-202ENST00000419308 LOC107984156A0A0G2JMH3 177 aa19.14■□□□□ 0.65
FOXA2-202ENST00000419308 UBE2D3P61077 147 aa19.14■□□□□ 0.65
FOXA2-202ENST00000419308 UBE2D2P62837 147 aa19.14■□□□□ 0.65
FOXA2-202ENST00000419308 COTL1Q14019 142 aa19.14■□□□□ 0.65
FOXA2-202ENST00000419308 ARL17AQ8IVW1 177 aa19.14■□□□□ 0.65
FOXA2-202ENST00000419308 IL17DQ8TAD2 202 aa19.14■□□□□ 0.65
FOXA2-202ENST00000419308 NIPBLQ6KC79 2804 aaeCLIP19.13■□□□□ 0.65
FOXA2-202ENST00000419308 ETDBQ3ZM63 59 aa19.13■□□□□ 0.65
FOXA2-202ENST00000419308 SH2D6Q7Z4S9 175 aa19.12■□□□□ 0.65
FOXA2-202ENST00000419308 TRAV8-3A0A0A6YYJ7 113 aa19.12■□□□□ 0.65
FOXA2-202ENST00000419308 Q6ZUT4 128 aa19.12■□□□□ 0.65
FOXA2-202ENST00000419308 LINC01006Q8NI28 216 aa19.12■□□□□ 0.65
FOXA2-202ENST00000419308 TSSC4Q9Y5U2 329 aaPredicted RBP19.12■□□□□ 0.65
FOXA2-202ENST00000419308 ACANP16112 2415 aa19.12■□□□□ 0.65
FOXA2-202ENST00000419308 TRGV1A0A0A0MS02 117 aa19.11■□□□□ 0.65
FOXA2-202ENST00000419308 TINCRA0A1B0GVN0 87 aa19.11■□□□□ 0.65
FOXA2-202ENST00000419308 A0A0J9YXY3 114 aa19.1■□□□□ 0.65
FOXA2-202ENST00000419308 A4D1N5 150 aa19.1■□□□□ 0.65
FOXA2-202ENST00000419308 PRO1854Q9UHT4 67 aa19.1■□□□□ 0.65
FOXA2-202ENST00000419308 TMEM238C9JI98 176 aa19.09■□□□□ 0.65
FOXA2-202ENST00000419308 IGHV1-58A0A0C4DH39 117 aa19.09■□□□□ 0.65
FOXA2-202ENST00000419308 ADARB2-AS1A8MUL3 147 aa19.09■□□□□ 0.65
FOXA2-202ENST00000419308 YAE1D1Q9NRH1 226 aa19.09■□□□□ 0.65
FOXA2-202ENST00000419308 SETXQ7Z333 2677 aaKnown RBP19.08■□□□□ 0.65
FOXA2-202ENST00000419308 PSMB2P49721 201 aa19.08■□□□□ 0.64
FOXA2-202ENST00000419308 MUSTN1Q8IVN3 82 aa19.08■□□□□ 0.64
FOXA2-202ENST00000419308 EIF4EBP3O60516 100 aaPredicted RBP19.06■□□□□ 0.64
FOXA2-202ENST00000419308 RNASE1P07998 156 aaKnown RBP19.06■□□□□ 0.64
FOXA2-202ENST00000419308 C16orf95Q9H693 158 aa19.06■□□□□ 0.64
FOXA2-202ENST00000419308 MTORP42345 2549 aa19.06■□□□□ 0.64
FOXA2-202ENST00000419308 LYRM7Q5U5X0 104 aa19.05■□□□□ 0.64
FOXA2-202ENST00000419308 Q6ZTI0 123 aa19.05■□□□□ 0.64
FOXA2-202ENST00000419308 VSIG2Q96IQ7 327 aa19.05■□□□□ 0.64
FOXA2-202ENST00000419308 JMJD1CQ15652 2540 aa19.05■□□□□ 0.64
FOXA2-202ENST00000419308 TMEM263Q8WUH6 116 aaKnown RBP19.04■□□□□ 0.64
FOXA2-202ENST00000419308 LITAFQ99732 161 aa19.04■□□□□ 0.64
FOXA2-202ENST00000419308 ITPR2Q14571 2701 aa19.04■□□□□ 0.64
FOXA2-202ENST00000419308 SPINK8P0C7L1 97 aa19.03■□□□□ 0.64
FOXA2-202ENST00000419308 SMCPP49901 116 aaPredicted RBP19.03■□□□□ 0.64
FOXA2-202ENST00000419308 NDUFA12Q9UI09 145 aa19.03■□□□□ 0.64
FOXA2-202ENST00000419308 NOTCH3Q9UM47 2321 aa19.02■□□□□ 0.64
FOXA2-202ENST00000419308 A8MZ25 164 aa19.02■□□□□ 0.64
FOXA2-202ENST00000419308 GIG44P09565 113 aaPredicted RBP19.02■□□□□ 0.64
FOXA2-202ENST00000419308 TCL1BO95988 128 aa19.02■□□□□ 0.63
FOXA2-202ENST00000419308 GEMIN7Q9H840 131 aaKnown RBP19.02■□□□□ 0.63
FOXA2-202ENST00000419308 A0A0B4J2C4 111 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 1525.6 ms