RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 UBTD1Q9HAC8 227 aa5.92□□□□□ -1.46
HMGXB4-202ENST00000418170 ATOX1O00244 68 aa5.92□□□□□ -1.46
HMGXB4-202ENST00000418170 COX7A2LO14548 114 aa5.92□□□□□ -1.46
HMGXB4-202ENST00000418170 PYGO1Q9Y3Y4 419 aa5.92□□□□□ -1.46
HMGXB4-202ENST00000418170 DAZ2Q13117 558 aaKnown RBP5.91□□□□□ -1.46
HMGXB4-202ENST00000418170 DAZ4Q86SG3 579 aaKnown RBP5.91□□□□□ -1.46
HMGXB4-202ENST00000418170 DAND5Q8N907 189 aa5.91□□□□□ -1.46
HMGXB4-202ENST00000418170 FAM104AQ969W3 186 aa5.91□□□□□ -1.46
HMGXB4-202ENST00000418170 DAZ1Q9NQZ3 744 aaKnown RBP5.91□□□□□ -1.46
HMGXB4-202ENST00000418170 DAZ3Q9NR90 486 aaKnown RBP5.91□□□□□ -1.46
HMGXB4-202ENST00000418170 TRAV41A0A0B4J266 112 aa5.91□□□□□ -1.46
HMGXB4-202ENST00000418170 CD28P10747 220 aa5.91□□□□□ -1.46
HMGXB4-202ENST00000418170 UNQ9165/PRO28630Q6UXU0 137 aa5.91□□□□□ -1.46
HMGXB4-202ENST00000418170 C9orf85Q96MD7 179 aa5.91□□□□□ -1.46
HMGXB4-202ENST00000418170 hADV29S1A0JD25 119 aa5.9□□□□□ -1.46
HMGXB4-202ENST00000418170 BEAN1Q3B7T3 259 aa5.9□□□□□ -1.46
HMGXB4-202ENST00000418170 MAP1BP46821 2468 aaKnown RBP5.9□□□□□ -1.46
HMGXB4-202ENST00000418170 A8MZ25 164 aa5.9□□□□□ -1.46
HMGXB4-202ENST00000418170 TINCRA0A1B0GVN0 87 aa5.9□□□□□ -1.47
HMGXB4-202ENST00000418170 TRACP01848 142 aa5.9□□□□□ -1.47
HMGXB4-202ENST00000418170 SPTBN2O15020 2390 aa5.9□□□□□ -1.47
HMGXB4-202ENST00000418170 APC2O95996 2303 aa5.89□□□□□ -1.47
HMGXB4-202ENST00000418170 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.89□□□□□ -1.47
HMGXB4-202ENST00000418170 TIRAPP58753 221 aa5.89□□□□□ -1.47
HMGXB4-202ENST00000418170 TMEM258P61165 79 aa5.89□□□□□ -1.47
HMGXB4-202ENST00000418170 CYSTM1Q9H1C7 97 aa5.89□□□□□ -1.47
HMGXB4-202ENST00000418170 C22orf24Q9Y442 160 aa5.89□□□□□ -1.47
HMGXB4-202ENST00000418170 IGHV3-16A0A0C4DH30 117 aa5.89□□□□□ -1.47
HMGXB4-202ENST00000418170 TRAV12-3A0A0B4J271 114 aa5.89□□□□□ -1.47
HMGXB4-202ENST00000418170 INAFM2P0DMQ5 153 aa5.89□□□□□ -1.47
HMGXB4-202ENST00000418170 FAM222AQ5U5X8 452 aa5.89□□□□□ -1.47
HMGXB4-202ENST00000418170 MED13LQ71F56 2210 aa5.88□□□□□ -1.47
HMGXB4-202ENST00000418170 FAM223BA6NKX1 122 aa5.88□□□□□ -1.47
HMGXB4-202ENST00000418170 NDUFA4O00483 81 aa5.88□□□□□ -1.47
HMGXB4-202ENST00000418170 LY6HO94772 140 aa5.88□□□□□ -1.47
HMGXB4-202ENST00000418170 BAALC-AS2P0C853 105 aa5.88□□□□□ -1.47
HMGXB4-202ENST00000418170 FAM223AQ8IWN6 122 aa5.88□□□□□ -1.47
HMGXB4-202ENST00000418170 DPH3Q96FX2 82 aa5.88□□□□□ -1.47
HMGXB4-202ENST00000418170 FBN2P35556 2912 aa5.88□□□□□ -1.47
HMGXB4-202ENST00000418170 NACAE9PAV3 2078 aa5.88□□□□□ -1.47
HMGXB4-202ENST00000418170 RPL18AQ02543 176 aaKnown RBP5.88□□□□□ -1.47
HMGXB4-202ENST00000418170 IGHV3OR16-10A0A075B7F0 116 aa5.88□□□□□ -1.47
HMGXB4-202ENST00000418170 NDUFA1O15239 70 aa5.88□□□□□ -1.47
HMGXB4-202ENST00000418170 LINC00308Q8TCZ7 52 aa5.88□□□□□ -1.47
HMGXB4-202ENST00000418170 IGKV3-7A0A075B6H7 116 aa5.87□□□□□ -1.47
HMGXB4-202ENST00000418170 TRBV12-3P01733 135 aa5.87□□□□□ -1.47
HMGXB4-202ENST00000418170 CIRBPQ14011 172 aaKnown RBP5.87□□□□□ -1.47
HMGXB4-202ENST00000418170 RNASE13Q5GAN3 156 aaKnown RBP5.87□□□□□ -1.47
HMGXB4-202ENST00000418170 KIR2DL5BQ8NHK3 375 aa5.87□□□□□ -1.47
HMGXB4-202ENST00000418170 Q8N2B8 174 aa5.87□□□□□ -1.47
HMGXB4-202ENST00000418170 C19orf54Q5BKX5 351 aa5.86□□□□□ -1.47
HMGXB4-202ENST00000418170 UPK3BQ9BT76 320 aa5.86□□□□□ -1.47
HMGXB4-202ENST00000418170 SERP2Q8N6R1 65 aa5.86□□□□□ -1.47
HMGXB4-202ENST00000418170 C5orf56Q8N8D9 126 aa5.86□□□□□ -1.47
HMGXB4-202ENST00000418170 SIRPDQ9H106 197 aa5.86□□□□□ -1.47
HMGXB4-202ENST00000418170 OXTP01178 125 aa5.85□□□□□ -1.47
HMGXB4-202ENST00000418170 SPTBN4Q9H254 2564 aa5.85□□□□□ -1.47
HMGXB4-202ENST00000418170 Q8NA96 180 aa5.85□□□□□ -1.47
HMGXB4-202ENST00000418170 IGHG2P01859 326 aa5.85□□□□□ -1.47
HMGXB4-202ENST00000418170 FAM218AQ96MZ4 157 aa5.85□□□□□ -1.47
HMGXB4-202ENST00000418170 RHPN1-AS1Q9BWJ2 59 aa5.85□□□□□ -1.47
HMGXB4-202ENST00000418170 RIF1Q5UIP0 2472 aaKnown RBP5.85□□□□□ -1.47
HMGXB4-202ENST00000418170 TRAV13-1A0A0B4J241 112 aa5.85□□□□□ -1.47
HMGXB4-202ENST00000418170 COPS9Q8WXC6 57 aa5.85□□□□□ -1.47
HMGXB4-202ENST00000418170 CDKN2A-AS1Q9UH64 79 aa5.85□□□□□ -1.47
HMGXB4-202ENST00000418170 UBE2D4Q9Y2X8 147 aa5.85□□□□□ -1.47
HMGXB4-202ENST00000418170 IGLV5-45A0A087WSX0 123 aa5.84□□□□□ -1.47
HMGXB4-202ENST00000418170 PF4V1P10720 104 aa5.84□□□□□ -1.47
HMGXB4-202ENST00000418170 ZFP36P26651 326 aaKnown RBP5.84□□□□□ -1.47
HMGXB4-202ENST00000418170 SAA4P35542 130 aa5.84□□□□□ -1.47
HMGXB4-202ENST00000418170 KLRB1Q12918 225 aa5.84□□□□□ -1.47
HMGXB4-202ENST00000418170 SOSTDC1Q6X4U4 206 aa5.84□□□□□ -1.47
HMGXB4-202ENST00000418170 DSCR8Q96T75 97 aa5.84□□□□□ -1.47
HMGXB4-202ENST00000418170 MALP21145 153 aa5.84□□□□□ -1.48
HMGXB4-202ENST00000418170 ZNF415Q09FC8 603 aa5.84□□□□□ -1.48
HMGXB4-202ENST00000418170 Q5XG85 94 aa5.84□□□□□ -1.48
HMGXB4-202ENST00000418170 Q6JHZ5 121 aa5.84□□□□□ -1.48
HMGXB4-202ENST00000418170 IGHV1OR15-1A0A075B7D0 117 aa5.83□□□□□ -1.48
HMGXB4-202ENST00000418170 TRAV12-2A0A075B6T6 113 aa5.83□□□□□ -1.48
HMGXB4-202ENST00000418170 C4orf26Q17RF5 130 aa5.83□□□□□ -1.48
HMGXB4-202ENST00000418170 PRIMA1Q86XR5 153 aa5.83□□□□□ -1.48
HMGXB4-202ENST00000418170 CHCHD7Q9BUK0 85 aa5.83□□□□□ -1.48
HMGXB4-202ENST00000418170 Q9H8V8 135 aa5.83□□□□□ -1.48
HMGXB4-202ENST00000418170 DNAL4O96015 105 aa5.83□□□□□ -1.48
HMGXB4-202ENST00000418170 LINC01560Q8TB33 94 aa5.83□□□□□ -1.48
HMGXB4-202ENST00000418170 IGSF10Q6WRI0 2623 aa5.82□□□□□ -1.48
HMGXB4-202ENST00000418170 F5H768 121 aa5.82□□□□□ -1.48
HMGXB4-202ENST00000418170 IGLV5-39A0A0G2JS06 123 aa5.82□□□□□ -1.48
HMGXB4-202ENST00000418170 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.82□□□□□ -1.48
HMGXB4-202ENST00000418170 ANKHD1Q8IWZ3 2542 aaKnown RBP5.82□□□□□ -1.48
HMGXB4-202ENST00000418170 CACNA1AO00555 2505 aa5.82□□□□□ -1.48
HMGXB4-202ENST00000418170 FLNCQ14315 2725 aa5.82□□□□□ -1.48
HMGXB4-202ENST00000418170 IGKV3D-7A0A0C4DH55 119 aa5.82□□□□□ -1.48
HMGXB4-202ENST00000418170 LINC01561Q8N1V8 128 aa5.82□□□□□ -1.48
HMGXB4-202ENST00000418170 Q9HAA7 133 aa5.82□□□□□ -1.48
HMGXB4-202ENST00000418170 A0A0U1RRA0 63 aa5.81□□□□□ -1.48
HMGXB4-202ENST00000418170 USP17L23D6RBM5 183 aa5.81□□□□□ -1.48
HMGXB4-202ENST00000418170 RS1O15537 224 aa5.81□□□□□ -1.48
HMGXB4-202ENST00000418170 HIST2H2BCQ6DN03 193 aa5.81□□□□□ -1.48
HMGXB4-202ENST00000418170 HIST2H2BDQ6DRA6 164 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms