RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 BEX4Q9NWD9 120 aaPredicted RBP13.12□□□□□ -0.31
SCARB1-203ENST00000415380 TRIAP1O43715 76 aa13.12□□□□□ -0.31
SCARB1-203ENST00000415380 LINC01620Q4KN68 170 aa13.12□□□□□ -0.31
SCARB1-203ENST00000415380 NDUFA12Q9UI09 145 aa13.12□□□□□ -0.31
SCARB1-203ENST00000415380 VPREB3Q9UKI3 123 aa13.12□□□□□ -0.31
SCARB1-203ENST00000415380 TRBV30A0A0K0K1B3 111 aa13.11□□□□□ -0.31
SCARB1-203ENST00000415380 A8MZ25 164 aa13.11□□□□□ -0.31
SCARB1-203ENST00000415380 TMEM262E9PQX1 116 aa13.11□□□□□ -0.31
SCARB1-203ENST00000415380 H3BMM0 161 aa13.11□□□□□ -0.31
SCARB1-203ENST00000415380 SLURP1P55000 103 aa13.11□□□□□ -0.31
SCARB1-203ENST00000415380 DSCR9P59020 149 aa13.11□□□□□ -0.31
SCARB1-203ENST00000415380 UBE2D4Q9Y2X8 147 aa13.11□□□□□ -0.31
SCARB1-203ENST00000415380 TINCRA0A1B0GVN0 87 aa13.11□□□□□ -0.31
SCARB1-203ENST00000415380 Q5PR19 223 aa13.11□□□□□ -0.31
SCARB1-203ENST00000415380 MAPK1IP1LQ8NDC0 245 aa13.11□□□□□ -0.31
SCARB1-203ENST00000415380 VSIG2Q96IQ7 327 aa13.11□□□□□ -0.31
SCARB1-203ENST00000415380 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.1□□□□□ -0.31
SCARB1-203ENST00000415380 IGKV2-29A2NJV5 120 aaPredicted RBP13.1□□□□□ -0.31
SCARB1-203ENST00000415380 A8MTW9 85 aa13.1□□□□□ -0.31
SCARB1-203ENST00000415380 DEFB136Q30KP8 78 aa13.1□□□□□ -0.31
SCARB1-203ENST00000415380 C18orf65Q6ZTR6 163 aa13.1□□□□□ -0.31
SCARB1-203ENST00000415380 SPANXDQ9BXN6 97 aa13.1□□□□□ -0.31
SCARB1-203ENST00000415380 SPANXCQ9NY87 97 aa13.1□□□□□ -0.31
SCARB1-203ENST00000415380 NTN5Q8WTR8 489 aaPredicted RBP13.1□□□□□ -0.31
SCARB1-203ENST00000415380 SPANXA1Q9NS26 97 aa13.09□□□□□ -0.31
SCARB1-203ENST00000415380 ZNF415Q09FC8 603 aa13.09□□□□□ -0.31
SCARB1-203ENST00000415380 MIAQ16674 131 aa13.08□□□□□ -0.32
SCARB1-203ENST00000415380 CSMD2Q7Z408 3487 aa13.08□□□□□ -0.32
SCARB1-203ENST00000415380 PRRC2AP48634 2157 aaKnown RBP13.08□□□□□ -0.32
SCARB1-203ENST00000415380 A0A096LNT2 108 aa13.08□□□□□ -0.32
SCARB1-203ENST00000415380 LINC00467Q9BRT7 94 aa13.08□□□□□ -0.32
SCARB1-203ENST00000415380 J3QLI3 93 aa13.07□□□□□ -0.32
SCARB1-203ENST00000415380 NPC2P61916 151 aa13.07□□□□□ -0.32
SCARB1-203ENST00000415380 NACAE9PAV3 2078 aa13.07□□□□□ -0.32
SCARB1-203ENST00000415380 IGHV3-38A0A0C4DH36 116 aa13.07□□□□□ -0.32
SCARB1-203ENST00000415380 ICOSQ9Y6W8 199 aa13.07□□□□□ -0.32
SCARB1-203ENST00000415380 PIK3CD-AS1Q5SR53 167 aa13.06□□□□□ -0.32
SCARB1-203ENST00000415380 CFAP46Q8IYW2 2715 aa13.06□□□□□ -0.32
SCARB1-203ENST00000415380 CUBNO60494 3623 aa13.06□□□□□ -0.32
SCARB1-203ENST00000415380 TRAV26-1A0A087WT03 109 aa13.06□□□□□ -0.32
SCARB1-203ENST00000415380 TRBV10-2A0A0K0K1G8 114 aa13.06□□□□□ -0.32
SCARB1-203ENST00000415380 Q6YL49 198 aa13.06□□□□□ -0.32
SCARB1-203ENST00000415380 Q6ZSV7 163 aa13.06□□□□□ -0.32
SCARB1-203ENST00000415380 LINC01600Q96MT4 127 aa13.06□□□□□ -0.32
SCARB1-203ENST00000415380 TMEM61Q8N0U2 210 aa13.05□□□□□ -0.32
SCARB1-203ENST00000415380 ZFAND6Q6FIF0 208 aa13.04□□□□□ -0.32
SCARB1-203ENST00000415380 C11orf72Q8NBR9 251 aa13.04□□□□□ -0.32
SCARB1-203ENST00000415380 FLNCQ14315 2725 aa13.04□□□□□ -0.32
SCARB1-203ENST00000415380 TEX49A0A1B0GTD5 131 aa13.04□□□□□ -0.32
SCARB1-203ENST00000415380 LINC01587Q99440 93 aa13.04□□□□□ -0.32
SCARB1-203ENST00000415380 IGHV3-53P01767 116 aa13.04□□□□□ -0.32
SCARB1-203ENST00000415380 DOPEY1Q5JWR5 2465 aa13.04□□□□□ -0.32
SCARB1-203ENST00000415380 PIEZO1Q92508 2521 aa13.03□□□□□ -0.32
SCARB1-203ENST00000415380 CITED1Q99966 193 aa13.03□□□□□ -0.32
SCARB1-203ENST00000415380 UTP20O75691 2785 aaKnown RBP13.03□□□□□ -0.32
SCARB1-203ENST00000415380 RPL13AP40429 203 aaKnown RBP13.03□□□□□ -0.32
SCARB1-203ENST00000415380 DNAJC30Q96LL9 226 aa13.03□□□□□ -0.32
SCARB1-203ENST00000415380 MAP6D1Q9H9H5 199 aa13.03□□□□□ -0.32
SCARB1-203ENST00000415380 CDKN2A-AS1Q9UH64 79 aa13.03□□□□□ -0.32
SCARB1-203ENST00000415380 PKD1L2Q7Z442 2459 aa13.02□□□□□ -0.32
SCARB1-203ENST00000415380 FSHBP01225 129 aa13.02□□□□□ -0.33
SCARB1-203ENST00000415380 CREBBPQ92793 2442 aa13.01□□□□□ -0.33
SCARB1-203ENST00000415380 YAE1D1Q9NRH1 226 aa13.01□□□□□ -0.33
SCARB1-203ENST00000415380 H7C423 109 aa13.01□□□□□ -0.33
SCARB1-203ENST00000415380 BEAN1Q3B7T3 259 aa13.01□□□□□ -0.33
SCARB1-203ENST00000415380 TEX29Q8N6K0 151 aa13.01□□□□□ -0.33
SCARB1-203ENST00000415380 DAND5Q8N907 189 aa13.01□□□□□ -0.33
SCARB1-203ENST00000415380 RNF183Q96D59 192 aa13.01□□□□□ -0.33
SCARB1-203ENST00000415380 USP9XQ93008 2570 aaPredicted RBP13.01□□□□□ -0.33
SCARB1-203ENST00000415380 ZANQ9Y493 2812 aa13.01□□□□□ -0.33
SCARB1-203ENST00000415380 TIMM17BO60830 172 aa13□□□□□ -0.33
SCARB1-203ENST00000415380 COX6CP09669 75 aa13□□□□□ -0.33
SCARB1-203ENST00000415380 C2orf82Q6UX34 121 aa13□□□□□ -0.33
SCARB1-203ENST00000415380 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13□□□□□ -0.33
SCARB1-203ENST00000415380 UBE2WQ96B02 151 aa13□□□□□ -0.33
SCARB1-203ENST00000415380 RS1O15537 224 aa13□□□□□ -0.33
SCARB1-203ENST00000415380 CLEC2BQ92478 149 aa13□□□□□ -0.33
SCARB1-203ENST00000415380 TMEM101Q96IK0 257 aa13□□□□□ -0.33
SCARB1-203ENST00000415380 PEMTQ9UBM1 199 aa13□□□□□ -0.33
SCARB1-203ENST00000415380 CLUHP3Q96NS8 147 aa12.99□□□□□ -0.33
SCARB1-203ENST00000415380 TIRAPP58753 221 aa12.99□□□□□ -0.33
SCARB1-203ENST00000415380 IGLV5-45A0A087WSX0 123 aa12.98□□□□□ -0.33
SCARB1-203ENST00000415380 TRAV8-4A0A0B4J246 113 aa12.98□□□□□ -0.33
SCARB1-203ENST00000415380 NDUFA1O15239 70 aa12.98□□□□□ -0.33
SCARB1-203ENST00000415380 INSP01308 110 aa12.98□□□□□ -0.33
SCARB1-203ENST00000415380 IFITM1P13164 125 aa12.98□□□□□ -0.33
SCARB1-203ENST00000415380 COX6A2Q02221 97 aa12.98□□□□□ -0.33
SCARB1-203ENST00000415380 ANAPC13Q9BS18 74 aa12.98□□□□□ -0.33
SCARB1-203ENST00000415380 CRLF1O75462 422 aa12.97□□□□□ -0.33
SCARB1-203ENST00000415380 DYNLRB2Q8TF09 96 aa12.97□□□□□ -0.33
SCARB1-203ENST00000415380 MXRA5Q9NR99 2828 aa12.97□□□□□ -0.33
SCARB1-203ENST00000415380 TRAV4A0A0B4J268 109 aa12.97□□□□□ -0.33
SCARB1-203ENST00000415380 SNCGO76070 127 aa12.97□□□□□ -0.33
SCARB1-203ENST00000415380 DGAT2L7PQ6IED9 249 aa12.97□□□□□ -0.33
SCARB1-203ENST00000415380 LST1O00453 97 aa12.97□□□□□ -0.33
SCARB1-203ENST00000415380 HIST2H2BDQ6DRA6 164 aa12.97□□□□□ -0.33
SCARB1-203ENST00000415380 USP9YO00507 2555 aaPredicted RBP12.96□□□□□ -0.33
SCARB1-203ENST00000415380 IGHV3OR16-12A0A075B7B8 117 aa12.96□□□□□ -0.33
SCARB1-203ENST00000415380 H3BT86 120 aa12.96□□□□□ -0.33
SCARB1-203ENST00000415380 IGHV4-31P0DP07 118 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms