RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 TRAV12-1A0A0B4J245 112 aa7.19□□□□□ -1.26
DDB1-202ENST00000414411 IGHV3-16A0A0C4DH30 117 aa7.19□□□□□ -1.26
DDB1-202ENST00000414411 CCL25O15444 150 aa7.19□□□□□ -1.26
DDB1-202ENST00000414411 RPL32P62910 135 aaKnown RBP7.19□□□□□ -1.26
DDB1-202ENST00000414411 UBE2V1Q13404 147 aa7.19□□□□□ -1.26
DDB1-202ENST00000414411 ZC2HC1BQ5TFG8 222 aa7.19□□□□□ -1.26
DDB1-202ENST00000414411 C1QTNF4Q9BXJ3 329 aa7.19□□□□□ -1.26
DDB1-202ENST00000414411 JPT2Q9H910 190 aa7.19□□□□□ -1.26
DDB1-202ENST00000414411 DNAH9Q9NYC9 4486 aa7.18□□□□□ -1.26
DDB1-202ENST00000414411 RBMY1A1P0DJD3 496 aaKnown RBP7.18□□□□□ -1.26
DDB1-202ENST00000414411 RBMY1CP0DJD4 496 aa7.18□□□□□ -1.26
DDB1-202ENST00000414411 PLNP26678 52 aa7.18□□□□□ -1.26
DDB1-202ENST00000414411 PTTG1IPP53801 180 aa7.18□□□□□ -1.26
DDB1-202ENST00000414411 RBMY1FQ15415 496 aaKnown RBP7.18□□□□□ -1.26
DDB1-202ENST00000414411 SBSPONQ8IVN8 264 aa7.18□□□□□ -1.26
DDB1-202ENST00000414411 OR4C5Q8NGB2 326 aa7.18□□□□□ -1.26
DDB1-202ENST00000414411 MRAPQ8TCY5 172 aa7.18□□□□□ -1.26
DDB1-202ENST00000414411 SCGB3A1Q96QR1 104 aa7.18□□□□□ -1.26
DDB1-202ENST00000414411 IGHV1OR15-1A0A075B7D0 117 aa7.17□□□□□ -1.26
DDB1-202ENST00000414411 CBY3A6NI87 242 aa7.17□□□□□ -1.26
DDB1-202ENST00000414411 F8VRH5 84 aa7.17□□□□□ -1.26
DDB1-202ENST00000414411 SUMO4Q6EEV6 95 aa7.17□□□□□ -1.26
DDB1-202ENST00000414411 C2orf66Q6UXQ4 117 aa7.17□□□□□ -1.26
DDB1-202ENST00000414411 C1orf158Q8N1D5 194 aa7.17□□□□□ -1.26
DDB1-202ENST00000414411 MDFICQ9P1T7 246 aa7.17□□□□□ -1.26
DDB1-202ENST00000414411 INSP01308 110 aa7.17□□□□□ -1.26
DDB1-202ENST00000414411 NEXN-AS1Q8NBZ9 246 aa7.17□□□□□ -1.26
DDB1-202ENST00000414411 HIGD1BQ9P298 99 aa7.17□□□□□ -1.26
DDB1-202ENST00000414411 H7C1H1 209 aa7.16□□□□□ -1.26
DDB1-202ENST00000414411 POLR2KP53803 58 aaKnown RBP7.16□□□□□ -1.26
DDB1-202ENST00000414411 VAMP3Q15836 100 aa7.16□□□□□ -1.26
DDB1-202ENST00000414411 C5orf47Q569G3 176 aa7.16□□□□□ -1.26
DDB1-202ENST00000414411 SYT8Q8NBV8 401 aa7.16□□□□□ -1.26
DDB1-202ENST00000414411 RNF183Q96D59 192 aa7.16□□□□□ -1.26
DDB1-202ENST00000414411 TTTY13Q9BZ97 58 aa7.16□□□□□ -1.26
DDB1-202ENST00000414411 A6NDN8 102 aa7.15□□□□□ -1.26
DDB1-202ENST00000414411 DEFB135Q30KP9 77 aa7.15□□□□□ -1.26
DDB1-202ENST00000414411 NEGR1Q7Z3B1 354 aa7.15□□□□□ -1.26
DDB1-202ENST00000414411 BAALCQ8WXS3 180 aa7.15□□□□□ -1.26
DDB1-202ENST00000414411 B9D2Q9BPU9 175 aa7.15□□□□□ -1.26
DDB1-202ENST00000414411 STAB2Q8WWQ8 2551 aa7.15□□□□□ -1.26
DDB1-202ENST00000414411 HUWE1Q7Z6Z7 4374 aaKnown RBP7.15□□□□□ -1.27
DDB1-202ENST00000414411 TRBV6-5A0A0K0K1A5 114 aa7.15□□□□□ -1.27
DDB1-202ENST00000414411 F5H697 171 aa7.15□□□□□ -1.27
DDB1-202ENST00000414411 FAM74A4Q5TZK3 123 aa7.15□□□□□ -1.27
DDB1-202ENST00000414411 TM2D3Q9BRN9 247 aa7.15□□□□□ -1.27
DDB1-202ENST00000414411 OVOL2Q9BRP0 275 aa7.15□□□□□ -1.27
DDB1-202ENST00000414411 CHAC1Q9BUX1 264 aa7.15□□□□□ -1.27
DDB1-202ENST00000414411 TP53TG1Q9Y2A0 90 aa7.15□□□□□ -1.27
DDB1-202ENST00000414411 TGP01266 2768 aa7.14□□□□□ -1.27
DDB1-202ENST00000414411 TRGV11A0A075B6L2 103 aa7.14□□□□□ -1.27
DDB1-202ENST00000414411 TRBV25-1A0A075B6N4 114 aa7.14□□□□□ -1.27
DDB1-202ENST00000414411 SDHAF1A6NFY7 115 aa7.14□□□□□ -1.27
DDB1-202ENST00000414411 LINC01549A6NIU2 74 aa7.14□□□□□ -1.27
DDB1-202ENST00000414411 VCYO14598 125 aa7.14□□□□□ -1.27
DDB1-202ENST00000414411 CRYGDP07320 174 aa7.14□□□□□ -1.27
DDB1-202ENST00000414411 ZFP2Q6ZN57 461 aa7.14□□□□□ -1.27
DDB1-202ENST00000414411 LINC00467Q9BRT7 94 aa7.14□□□□□ -1.27
DDB1-202ENST00000414411 CYSLTR1Q9Y271 337 aa7.14□□□□□ -1.27
DDB1-202ENST00000414411 X6R8D5 127 aa7.14□□□□□ -1.27
DDB1-202ENST00000414411 TRAV8-6A0A0B4J262 113 aa7.13□□□□□ -1.27
DDB1-202ENST00000414411 TRBV27A0A0K0K1C4 114 aa7.13□□□□□ -1.27
DDB1-202ENST00000414411 H3BRM9 83 aa7.13□□□□□ -1.27
DDB1-202ENST00000414411 PRM2P04554 102 aa7.13□□□□□ -1.27
DDB1-202ENST00000414411 ZNF56Q15929 161 aa7.13□□□□□ -1.27
DDB1-202ENST00000414411 LINC01587Q99440 93 aa7.13□□□□□ -1.27
DDB1-202ENST00000414411 KIR2DL4Q99706 377 aa7.13□□□□□ -1.27
DDB1-202ENST00000414411 M0QY20 66 aa7.13□□□□□ -1.27
DDB1-202ENST00000414411 ZNF876PQ49A33 203 aa7.13□□□□□ -1.27
DDB1-202ENST00000414411 AMMECR1LQ6DCA0 310 aa7.13□□□□□ -1.27
DDB1-202ENST00000414411 CSDC2Q9Y534 153 aaKnown RBP7.13□□□□□ -1.27
DDB1-202ENST00000414411 IGHV3OR16-12A0A075B7B8 117 aa7.12□□□□□ -1.27
DDB1-202ENST00000414411 SMIM9A6NGZ8 99 aa7.12□□□□□ -1.27
DDB1-202ENST00000414411 IGIPA6NJ69 53 aa7.12□□□□□ -1.27
DDB1-202ENST00000414411 USP17L23D6RBM5 183 aa7.12□□□□□ -1.27
DDB1-202ENST00000414411 RS1O15537 224 aa7.12□□□□□ -1.27
DDB1-202ENST00000414411 HERV-K104P63124 156 aa7.12□□□□□ -1.27
DDB1-202ENST00000414411 MRPL23Q16540 153 aaKnown RBP7.12□□□□□ -1.27
DDB1-202ENST00000414411 MAPKAPK5-AS1Q8N8E1 139 aa7.12□□□□□ -1.27
DDB1-202ENST00000414411 OR11H2Q8NH07 326 aa7.12□□□□□ -1.27
DDB1-202ENST00000414411 RETNQ9HD89 108 aa7.12□□□□□ -1.27
DDB1-202ENST00000414411 C9orf118A6NHY6 69 aa7.11□□□□□ -1.27
DDB1-202ENST00000414411 TSHBP01222 138 aa7.11□□□□□ -1.27
DDB1-202ENST00000414411 AZU1P20160 251 aa7.11□□□□□ -1.27
DDB1-202ENST00000414411 SPATA25Q9BR10 227 aa7.11□□□□□ -1.27
DDB1-202ENST00000414411 GCSHP23434 173 aa7.11□□□□□ -1.27
DDB1-202ENST00000414411 FXYD2P54710 66 aa7.11□□□□□ -1.27
DDB1-202ENST00000414411 RPL39P62891 51 aaKnown RBP7.11□□□□□ -1.27
DDB1-202ENST00000414411 TMEM141Q96I45 108 aa7.11□□□□□ -1.27
DDB1-202ENST00000414411 TIMM17AQ99595 171 aa7.11□□□□□ -1.27
DDB1-202ENST00000414411 PLAC8L1A1L4L8 177 aa7.1□□□□□ -1.27
DDB1-202ENST00000414411 K7EP13 123 aa7.1□□□□□ -1.27
DDB1-202ENST00000414411 HTN1P15515 57 aa7.1□□□□□ -1.27
DDB1-202ENST00000414411 RRN3P1Q2M238 152 aa7.1□□□□□ -1.27
DDB1-202ENST00000414411 SERTAD4-AS1Q5TG53 156 aa7.1□□□□□ -1.27
DDB1-202ENST00000414411 Q8NAQ8 132 aa7.1□□□□□ -1.27
DDB1-202ENST00000414411 C11orf72Q8NBR9 251 aa7.1□□□□□ -1.27
DDB1-202ENST00000414411 DEFB104AQ8WTQ1 72 aa7.1□□□□□ -1.27
DDB1-202ENST00000414411 TM2D2Q9BX73 214 aa7.1□□□□□ -1.27
DDB1-202ENST00000414411 IGLV4-69A0A075B6H9 119 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 242.1 ms