RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 APCSP02743 223 aa9.84□□□□□ -0.83
CHD1-202ENST00000414220 RBX1P62877 108 aa9.84□□□□□ -0.83
CHD1-202ENST00000414220 HBBP68871 147 aa9.84□□□□□ -0.83
CHD1-202ENST00000414220 FAT2Q9NYQ8 4349 aa9.83□□□□□ -0.84
CHD1-202ENST00000414220 TMEM218A2RU14 115 aa9.83□□□□□ -0.84
CHD1-202ENST00000414220 MIAQ16674 131 aa9.83□□□□□ -0.84
CHD1-202ENST00000414220 FAM104BQ5XKR9 115 aa9.83□□□□□ -0.84
CHD1-202ENST00000414220 AMMECR1LQ6DCA0 310 aa9.83□□□□□ -0.84
CHD1-202ENST00000414220 MRPL54Q6P161 138 aaKnown RBP9.83□□□□□ -0.84
CHD1-202ENST00000414220 ATP5L2Q7Z4Y8 100 aa9.83□□□□□ -0.84
CHD1-202ENST00000414220 Q8N976 141 aa9.83□□□□□ -0.84
CHD1-202ENST00000414220 RNF185Q96GF1 192 aa9.83□□□□□ -0.84
CHD1-202ENST00000414220 A0A1B0GUV1 79 aa9.82□□□□□ -0.84
CHD1-202ENST00000414220 H7C423 109 aa9.82□□□□□ -0.84
CHD1-202ENST00000414220 NTN5Q8WTR8 489 aaPredicted RBP9.82□□□□□ -0.84
CHD1-202ENST00000414220 VCYO14598 125 aa9.81□□□□□ -0.84
CHD1-202ENST00000414220 CKS2P33552 79 aa9.81□□□□□ -0.84
CHD1-202ENST00000414220 KRTAP10-2P60368 255 aa9.81□□□□□ -0.84
CHD1-202ENST00000414220 COMMD7Q86VX2 200 aa9.81□□□□□ -0.84
CHD1-202ENST00000414220 BTF3L4Q96K17 158 aa9.81□□□□□ -0.84
CHD1-202ENST00000414220 SMAGPQ0VAQ4 97 aa9.8□□□□□ -0.84
CHD1-202ENST00000414220 MRPL51Q4U2R6 128 aaKnown RBP9.8□□□□□ -0.84
CHD1-202ENST00000414220 LINC00269Q8N2A0 174 aa9.8□□□□□ -0.84
CHD1-202ENST00000414220 DEFB104AQ8WTQ1 72 aa9.8□□□□□ -0.84
CHD1-202ENST00000414220 KIR2DL4Q99706 377 aa9.8□□□□□ -0.84
CHD1-202ENST00000414220 TMEM70Q9BUB7 260 aa9.8□□□□□ -0.84
CHD1-202ENST00000414220 SEC11CQ9BY50 192 aa9.8□□□□□ -0.84
CHD1-202ENST00000414220 CTDSP1Q9GZU7 261 aa9.8□□□□□ -0.84
CHD1-202ENST00000414220 TRAV8-4A0A0B4J246 113 aa9.79□□□□□ -0.84
CHD1-202ENST00000414220 LRCOL1A6NCL2 159 aa9.79□□□□□ -0.84
CHD1-202ENST00000414220 TCAPO15273 167 aa9.79□□□□□ -0.84
CHD1-202ENST00000414220 PPBPP02775 128 aa9.79□□□□□ -0.84
CHD1-202ENST00000414220 FCER1GP30273 86 aa9.79□□□□□ -0.84
CHD1-202ENST00000414220 SUMO2P61956 95 aaKnown RBP9.79□□□□□ -0.84
CHD1-202ENST00000414220 REG3AQ06141 175 aa9.79□□□□□ -0.84
CHD1-202ENST00000414220 C14orf177Q52M58 125 aa9.79□□□□□ -0.84
CHD1-202ENST00000414220 ENHOQ6UWT2 76 aa9.79□□□□□ -0.84
CHD1-202ENST00000414220 Q8N814 137 aa9.79□□□□□ -0.84
CHD1-202ENST00000414220 TMEM101Q96IK0 257 aa9.79□□□□□ -0.84
CHD1-202ENST00000414220 IGLV5-52A0A0A0MRZ9 124 aa9.78□□□□□ -0.84
CHD1-202ENST00000414220 TRBV27A0A0K0K1C4 114 aa9.78□□□□□ -0.84
CHD1-202ENST00000414220 POLR2KP53803 58 aaKnown RBP9.78□□□□□ -0.84
CHD1-202ENST00000414220 RNASEKQ6P5S7 137 aaKnown RBP9.78□□□□□ -0.84
CHD1-202ENST00000414220 IMMP2LQ96T52 175 aa9.78□□□□□ -0.84
CHD1-202ENST00000414220 C20orf78Q9BR46 151 aa9.78□□□□□ -0.84
CHD1-202ENST00000414220 PRR34Q9NV39 138 aa9.78□□□□□ -0.84
CHD1-202ENST00000414220 HECTD4Q9Y4D8 3996 aa9.78□□□□□ -0.84
CHD1-202ENST00000414220 A0A1B0GXF2 115 aa9.77□□□□□ -0.85
CHD1-202ENST00000414220 SMKR1H3BMG3 65 aa9.77□□□□□ -0.85
CHD1-202ENST00000414220 ZNF25P17030 456 aaPredicted RBP9.77□□□□□ -0.85
CHD1-202ENST00000414220 RPS10P46783 165 aaKnown RBP9.77□□□□□ -0.85
CHD1-202ENST00000414220 BAALCQ8WXS3 180 aa9.77□□□□□ -0.85
CHD1-202ENST00000414220 TMEM242Q9NWH2 141 aa9.77□□□□□ -0.85
CHD1-202ENST00000414220 PHOX2AO14813 284 aa9.76□□□□□ -0.85
CHD1-202ENST00000414220 GAS8-AS1O95177 125 aa9.76□□□□□ -0.85
CHD1-202ENST00000414220 GCSHP23434 173 aa9.76□□□□□ -0.85
CHD1-202ENST00000414220 S100PP25815 95 aa9.76□□□□□ -0.85
CHD1-202ENST00000414220 CLPSL2Q6UWE3 100 aa9.76□□□□□ -0.85
CHD1-202ENST00000414220 C20orf203Q8NBC4 194 aa9.76□□□□□ -0.85
CHD1-202ENST00000414220 TMEM18Q96B42 140 aa9.76□□□□□ -0.85
CHD1-202ENST00000414220 IGLV4-60A0A075B6I1 120 aa9.75□□□□□ -0.85
CHD1-202ENST00000414220 TRBV24-1A0A075B6N3 115 aa9.75□□□□□ -0.85
CHD1-202ENST00000414220 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.75□□□□□ -0.85
CHD1-202ENST00000414220 IGKV2-29A2NJV5 120 aaPredicted RBP9.75□□□□□ -0.85
CHD1-202ENST00000414220 C7orf77A4D0Y5 90 aa9.75□□□□□ -0.85
CHD1-202ENST00000414220 CDK2AP2O75956 126 aa9.75□□□□□ -0.85
CHD1-202ENST00000414220 HLA-DQA1P01909 254 aa9.75□□□□□ -0.85
CHD1-202ENST00000414220 FGF6P10767 208 aa9.75□□□□□ -0.85
CHD1-202ENST00000414220 DGAT2L7PQ6IED9 249 aa9.75□□□□□ -0.85
CHD1-202ENST00000414220 ORMDL3Q8N138 153 aa9.75□□□□□ -0.85
CHD1-202ENST00000414220 NRACQ8N912 160 aa9.75□□□□□ -0.85
CHD1-202ENST00000414220 PKD1P98161 4303 aa9.74□□□□□ -0.85
CHD1-202ENST00000414220 D6R8Y8 96 aa9.74□□□□□ -0.85
CHD1-202ENST00000414220 LECT2O14960 151 aa9.74□□□□□ -0.85
CHD1-202ENST00000414220 TNFRSF6BO95407 300 aa9.74□□□□□ -0.85
CHD1-202ENST00000414220 TSHBP01222 138 aa9.74□□□□□ -0.85
CHD1-202ENST00000414220 ADCYAP1P18509 176 aa9.74□□□□□ -0.85
CHD1-202ENST00000414220 TMEM136Q6ZRR5 245 aa9.74□□□□□ -0.85
CHD1-202ENST00000414220 OR5A1Q8NGJ0 315 aa9.74□□□□□ -0.85
CHD1-202ENST00000414220 TRAV9-1A0A075B6T8 112 aa9.73□□□□□ -0.85
CHD1-202ENST00000414220 ESDP10768 282 aa9.73□□□□□ -0.85
CHD1-202ENST00000414220 RPL32P62910 135 aaKnown RBP9.73□□□□□ -0.85
CHD1-202ENST00000414220 NDUFA5Q16718 116 aa9.73□□□□□ -0.85
CHD1-202ENST00000414220 MAPKAPK5-AS1Q8N8E1 139 aa9.72□□□□□ -0.85
CHD1-202ENST00000414220 PRELID3AQ96N28 172 aa9.72□□□□□ -0.85
CHD1-202ENST00000414220 LAMTOR2Q9Y2Q5 125 aa9.72□□□□□ -0.85
CHD1-202ENST00000414220 DNAH11Q96DT5 4516 aa9.71□□□□□ -0.85
CHD1-202ENST00000414220 IGLV10-54A0A075B6I4 117 aa9.71□□□□□ -0.86
CHD1-202ENST00000414220 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.71□□□□□ -0.86
CHD1-202ENST00000414220 IGKV3OR2-268A0A0C4DH90 116 aa9.71□□□□□ -0.86
CHD1-202ENST00000414220 RAB5AP20339 215 aa9.71□□□□□ -0.86
CHD1-202ENST00000414220 MRPL52Q86TS9 123 aaKnown RBP9.71□□□□□ -0.86
CHD1-202ENST00000414220 FUSP35637 526 aaKnown RBP eCLIP9.7□□□□□ -0.86
CHD1-202ENST00000414220 RHEBQ15382 184 aa9.7□□□□□ -0.86
CHD1-202ENST00000414220 CFAP161Q6P656 301 aa9.7□□□□□ -0.86
CHD1-202ENST00000414220 CLRN3Q8NCR9 226 aa9.7□□□□□ -0.86
CHD1-202ENST00000414220 SMIM2Q9BVW6 85 aa9.7□□□□□ -0.86
CHD1-202ENST00000414220 CARHSP1Q9Y2V2 147 aaKnown RBP9.7□□□□□ -0.86
CHD1-202ENST00000414220 NPYP01303 97 aa9.69□□□□□ -0.86
CHD1-202ENST00000414220 DYNC1H1Q14204 4646 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms