RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TRBV20-1A0A075B6N2 111 aa7□□□□□ -1.29
SNHG3-201ENST00000413987 IGHV4-28A0A0C4DH34 117 aa7□□□□□ -1.29
SNHG3-201ENST00000413987 LY6LH3BQJ8 138 aa7□□□□□ -1.29
SNHG3-201ENST00000413987 ZNF688P0C7X2 276 aa7□□□□□ -1.29
SNHG3-201ENST00000413987 NHLRC4P0CG21 123 aaPredicted RBP7□□□□□ -1.29
SNHG3-201ENST00000413987 DSCR9P59020 149 aa7□□□□□ -1.29
SNHG3-201ENST00000413987 MORN3Q6PF18 240 aaPredicted RBP7□□□□□ -1.29
SNHG3-201ENST00000413987 RNF185Q96GF1 192 aa7□□□□□ -1.29
SNHG3-201ENST00000413987 CNFNQ9BYD5 112 aa7□□□□□ -1.29
SNHG3-201ENST00000413987 MRPL35Q9NZE8 188 aaKnown RBP7□□□□□ -1.29
SNHG3-201ENST00000413987 NAV3Q8IVL0 2385 aa7□□□□□ -1.29
SNHG3-201ENST00000413987 B4DSR2 109 aa7□□□□□ -1.29
SNHG3-201ENST00000413987 NFE4Q86UQ8 179 aa7□□□□□ -1.29
SNHG3-201ENST00000413987 C11orf72Q8NBR9 251 aa7□□□□□ -1.29
SNHG3-201ENST00000413987 HIVEP1P15822 2718 aa7□□□□□ -1.29
SNHG3-201ENST00000413987 TRAV12-1A0A0B4J245 112 aa6.99□□□□□ -1.29
SNHG3-201ENST00000413987 APELAP0DMC3 54 aa6.99□□□□□ -1.29
SNHG3-201ENST00000413987 DPM3Q9P2X0 92 aa6.99□□□□□ -1.29
SNHG3-201ENST00000413987 ANK3Q12955 4377 aaKnown RBP6.99□□□□□ -1.29
SNHG3-201ENST00000413987 K7EMI3 77 aa6.99□□□□□ -1.29
SNHG3-201ENST00000413987 PSMB2P49721 201 aa6.99□□□□□ -1.29
SNHG3-201ENST00000413987 SBSPONQ8IVN8 264 aa6.99□□□□□ -1.29
SNHG3-201ENST00000413987 ZNF491Q8N8L2 437 aa6.99□□□□□ -1.29
SNHG3-201ENST00000413987 IGHV3-21A0A0B4J1V1 117 aa6.98□□□□□ -1.29
SNHG3-201ENST00000413987 IGHV3OR16-9A0A0B4J2B5 98 aa6.98□□□□□ -1.29
SNHG3-201ENST00000413987 A8MWV9 139 aa6.98□□□□□ -1.29
SNHG3-201ENST00000413987 EGR2P11161 476 aaPredicted RBP6.98□□□□□ -1.29
SNHG3-201ENST00000413987 HES1Q14469 280 aa6.98□□□□□ -1.29
SNHG3-201ENST00000413987 MRGPRG-AS1Q2M3A8 158 aa6.98□□□□□ -1.29
SNHG3-201ENST00000413987 LINC01587Q99440 93 aa6.98□□□□□ -1.29
SNHG3-201ENST00000413987 F8VRH5 84 aa6.97□□□□□ -1.29
SNHG3-201ENST00000413987 I3L2K1 104 aa6.97□□□□□ -1.29
SNHG3-201ENST00000413987 ASIPP42127 132 aa6.97□□□□□ -1.29
SNHG3-201ENST00000413987 UBE2D3P61077 147 aa6.97□□□□□ -1.29
SNHG3-201ENST00000413987 UBE2D2P62837 147 aa6.97□□□□□ -1.29
SNHG3-201ENST00000413987 PRR3P79522 188 aaKnown RBP6.97□□□□□ -1.29
SNHG3-201ENST00000413987 IGLV2-18A0A075B6J9 118 aa6.97□□□□□ -1.29
SNHG3-201ENST00000413987 LOC107984156A0A0G2JMH3 177 aa6.97□□□□□ -1.29
SNHG3-201ENST00000413987 M0R3E3 92 aa6.97□□□□□ -1.29
SNHG3-201ENST00000413987 ARL17AQ8IVW1 177 aa6.97□□□□□ -1.29
SNHG3-201ENST00000413987 OR10J6PQ8NGY7 276 aa6.97□□□□□ -1.29
SNHG3-201ENST00000413987 SMR3AQ99954 134 aa6.97□□□□□ -1.29
SNHG3-201ENST00000413987 MSRB1Q9NZV6 116 aa6.97□□□□□ -1.29
SNHG3-201ENST00000413987 TRAV8-3A0A0A6YYJ7 113 aa6.96□□□□□ -1.29
SNHG3-201ENST00000413987 LINC01549A6NIU2 74 aa6.96□□□□□ -1.29
SNHG3-201ENST00000413987 NDUFA3O95167 84 aa6.96□□□□□ -1.29
SNHG3-201ENST00000413987 IGKV1-17P01599 117 aa6.96□□□□□ -1.29
SNHG3-201ENST00000413987 P0DMU3 169 aa6.96□□□□□ -1.29
SNHG3-201ENST00000413987 FAM231AP0DMU4 169 aa6.96□□□□□ -1.29
SNHG3-201ENST00000413987 FAM231CP0DMU5 169 aa6.96□□□□□ -1.29
SNHG3-201ENST00000413987 UBE2D1P51668 147 aa6.96□□□□□ -1.29
SNHG3-201ENST00000413987 NIPBLQ6KC79 2804 aaeCLIP6.96□□□□□ -1.293e-44■■□□□ 13
SNHG3-201ENST00000413987 IGHV1-69DA0A0B4J2H0 117 aa6.96□□□□□ -1.3
SNHG3-201ENST00000413987 IGHV1-69P01742 117 aa6.96□□□□□ -1.3
SNHG3-201ENST00000413987 IGHV4-30-4P0DP06 118 aa6.96□□□□□ -1.3
SNHG3-201ENST00000413987 TRPT1Q86TN4 253 aaKnown RBP6.96□□□□□ -1.3
SNHG3-201ENST00000413987 CHCHD10Q8WYQ3 142 aaPredicted RBP6.96□□□□□ -1.3
SNHG3-201ENST00000413987 Q6Q795 121 aa6.95□□□□□ -1.3
SNHG3-201ENST00000413987 C6orf223Q8N319 242 aa6.95□□□□□ -1.3
SNHG3-201ENST00000413987 SETD2Q9BYW2 2564 aaPredicted RBP6.94□□□□□ -1.3
SNHG3-201ENST00000413987 SNCGO76070 127 aa6.94□□□□□ -1.3
SNHG3-201ENST00000413987 SCGB1C2P0DMR2 95 aa6.94□□□□□ -1.3
SNHG3-201ENST00000413987 LY6EQ16553 131 aa6.94□□□□□ -1.3
SNHG3-201ENST00000413987 XCL2Q9UBD3 114 aa6.94□□□□□ -1.3
SNHG3-201ENST00000413987 IFITM1P13164 125 aa6.93□□□□□ -1.3
SNHG3-201ENST00000413987 NDUFV3P56181 108 aaKnown RBP6.93□□□□□ -1.3
SNHG3-201ENST00000413987 ORMDL2Q53FV1 153 aa6.93□□□□□ -1.3
SNHG3-201ENST00000413987 MINOS1Q5TGZ0 78 aa6.93□□□□□ -1.3
SNHG3-201ENST00000413987 MINOS1-NBL1R4GNA1 71 aa6.93□□□□□ -1.3
SNHG3-201ENST00000413987 NSD1Q96L73 2696 aaPredicted RBP6.93□□□□□ -1.3
SNHG3-201ENST00000413987 IGKV2-40A0A087WW87 121 aaPredicted RBP6.93□□□□□ -1.3
SNHG3-201ENST00000413987 IGKV2D-40P01614 121 aaPredicted RBP6.93□□□□□ -1.3
SNHG3-201ENST00000413987 KRTAP1-1Q07627 177 aa6.93□□□□□ -1.3
SNHG3-201ENST00000413987 UNQ9165/PRO28630Q6UXU0 137 aa6.93□□□□□ -1.3
SNHG3-201ENST00000413987 ZFP2Q6ZN57 461 aa6.93□□□□□ -1.3
SNHG3-201ENST00000413987 FAM19A3Q7Z5A8 133 aa6.93□□□□□ -1.3
SNHG3-201ENST00000413987 PRR15Q8IV56 129 aa6.93□□□□□ -1.3
SNHG3-201ENST00000413987 RNF5Q99942 180 aa6.93□□□□□ -1.3
SNHG3-201ENST00000413987 MDFICQ9P1T7 246 aa6.93□□□□□ -1.3
SNHG3-201ENST00000413987 TEP1Q99973 2627 aaKnown RBP6.92□□□□□ -1.3
SNHG3-201ENST00000413987 ZNF815PA8K554 130 aa6.92□□□□□ -1.3
SNHG3-201ENST00000413987 K7EIM0 57 aa6.92□□□□□ -1.3
SNHG3-201ENST00000413987 GAS8-AS1O95177 125 aa6.92□□□□□ -1.3
SNHG3-201ENST00000413987 ZNF80P51504 273 aaPredicted RBP6.92□□□□□ -1.3
SNHG3-201ENST00000413987 ERCC8Q13216 396 aa6.92□□□□□ -1.3
SNHG3-201ENST00000413987 NDUFA11Q86Y39 141 aa6.92□□□□□ -1.3
SNHG3-201ENST00000413987 NRACQ8N912 160 aa6.92□□□□□ -1.3
SNHG3-201ENST00000413987 PYGO1Q9Y3Y4 419 aa6.92□□□□□ -1.3
SNHG3-201ENST00000413987 FAM236AA0A1B0GUQ0 79 aa6.92□□□□□ -1.3
SNHG3-201ENST00000413987 FAM236BA0A1B0GV22 79 aa6.92□□□□□ -1.3
SNHG3-201ENST00000413987 CYSRT1A8MQ03 144 aa6.92□□□□□ -1.3
SNHG3-201ENST00000413987 H3BUX3 64 aa6.92□□□□□ -1.3
SNHG3-201ENST00000413987 TCL1BO95988 128 aa6.92□□□□□ -1.3
SNHG3-201ENST00000413987 CD7P09564 240 aa6.92□□□□□ -1.3
SNHG3-201ENST00000413987 NDPQ00604 133 aa6.92□□□□□ -1.3
SNHG3-201ENST00000413987 DEFB112Q30KQ8 113 aa6.92□□□□□ -1.3
SNHG3-201ENST00000413987 SCGB3A1Q96QR1 104 aa6.92□□□□□ -1.3
SNHG3-201ENST00000413987 LINC01548A6NM66 108 aa6.91□□□□□ -1.3
SNHG3-201ENST00000413987 H3BVH4 76 aa6.91□□□□□ -1.3
SNHG3-201ENST00000413987 ZNF575Q86XF7 245 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms