RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 RBMY1FQ15415 496 aaKnown RBP12.87□□□□□ -0.35
SDCBP-202ENST00000413219 CEMP1Q6PRD7 247 aaPredicted RBP12.87□□□□□ -0.35
SDCBP-202ENST00000413219 LST1O00453 97 aa12.86□□□□□ -0.35
SDCBP-202ENST00000413219 DEFB121Q5J5C9 76 aa12.86□□□□□ -0.35
SDCBP-202ENST00000413219 FAM240AA0A1B0GVK7 77 aa12.85□□□□□ -0.35
SDCBP-202ENST00000413219 C10orf99Q6UWK7 81 aa12.85□□□□□ -0.35
SDCBP-202ENST00000413219 SVEP1Q4LDE5 3571 aa12.85□□□□□ -0.35
SDCBP-202ENST00000413219 IGHV3-73A0A0B4J1V6 119 aa12.85□□□□□ -0.35
SDCBP-202ENST00000413219 B4DSR2 109 aa12.85□□□□□ -0.35
SDCBP-202ENST00000413219 PROK1P58294 105 aa12.85□□□□□ -0.35
SDCBP-202ENST00000413219 TTC32Q5I0X7 151 aa12.85□□□□□ -0.35
SDCBP-202ENST00000413219 HIVEP3Q5T1R4 2406 aa12.85□□□□□ -0.35
SDCBP-202ENST00000413219 C15orf53Q8NAA6 179 aa12.85□□□□□ -0.35
SDCBP-202ENST00000413219 COL6A6A6NMZ7 2263 aa12.84□□□□□ -0.35
SDCBP-202ENST00000413219 AVPP01185 164 aa12.84□□□□□ -0.35
SDCBP-202ENST00000413219 DNAJC30Q96LL9 226 aa12.84□□□□□ -0.35
SDCBP-202ENST00000413219 ATP5J2P56134 94 aa12.84□□□□□ -0.35
SDCBP-202ENST00000413219 ATRXP46100 2492 aa12.83□□□□□ -0.36
SDCBP-202ENST00000413219 IGLV5-45A0A087WSX0 123 aa12.83□□□□□ -0.36
SDCBP-202ENST00000413219 IGHV4-59P01825 116 aa12.83□□□□□ -0.36
SDCBP-202ENST00000413219 TIRAPP58753 221 aa12.83□□□□□ -0.36
SDCBP-202ENST00000413219 ZNF415Q09FC8 603 aa12.83□□□□□ -0.36
SDCBP-202ENST00000413219 RNASE13Q5GAN3 156 aaKnown RBP12.83□□□□□ -0.36
SDCBP-202ENST00000413219 NDUFA1O15239 70 aa12.82□□□□□ -0.36
SDCBP-202ENST00000413219 LY6DQ14210 128 aa12.82□□□□□ -0.36
SDCBP-202ENST00000413219 PRRC2AP48634 2157 aaKnown RBP12.82□□□□□ -0.36
SDCBP-202ENST00000413219 HOXD3P31249 432 aaPredicted RBP12.81□□□□□ -0.36
SDCBP-202ENST00000413219 DEFB112Q30KQ8 113 aa12.81□□□□□ -0.36
SDCBP-202ENST00000413219 CLEC2BQ92478 149 aa12.81□□□□□ -0.36
SDCBP-202ENST00000413219 DUX3Q96PT4 197 aa12.81□□□□□ -0.36
SDCBP-202ENST00000413219 SPTAN1Q13813 2472 aaKnown RBP12.81□□□□□ -0.36
SDCBP-202ENST00000413219 GAGE12JA6NER3 117 aa12.81□□□□□ -0.36
SDCBP-202ENST00000413219 KNCNA6PVL3 124 aa12.81□□□□□ -0.36
SDCBP-202ENST00000413219 GAGE7O76087 117 aa12.81□□□□□ -0.36
SDCBP-202ENST00000413219 GAGE12FP0CL80 117 aa12.81□□□□□ -0.36
SDCBP-202ENST00000413219 GAGE12GP0CL81 117 aa12.81□□□□□ -0.36
SDCBP-202ENST00000413219 GAGE12IP0CL82 117 aa12.81□□□□□ -0.36
SDCBP-202ENST00000413219 GAGE4Q13068 117 aa12.81□□□□□ -0.36
SDCBP-202ENST00000413219 Q6ZSN1 163 aa12.81□□□□□ -0.36
SDCBP-202ENST00000413219 LINC00467Q9BRT7 94 aa12.81□□□□□ -0.36
SDCBP-202ENST00000413219 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.8□□□□□ -0.36
SDCBP-202ENST00000413219 IGKV2-29A2NJV5 120 aaPredicted RBP12.8□□□□□ -0.36
SDCBP-202ENST00000413219 A8MZ25 164 aa12.8□□□□□ -0.36
SDCBP-202ENST00000413219 IGHV3-53P01767 116 aa12.8□□□□□ -0.36
SDCBP-202ENST00000413219 HTN1P15515 57 aa12.8□□□□□ -0.36
SDCBP-202ENST00000413219 GNLYP22749 145 aa12.8□□□□□ -0.36
SDCBP-202ENST00000413219 UBE2E2Q96LR5 201 aa12.8□□□□□ -0.36
SDCBP-202ENST00000413219 IGF2RP11717 2491 aa12.79□□□□□ -0.36
SDCBP-202ENST00000413219 AKAP6Q13023 2319 aa12.79□□□□□ -0.36
SDCBP-202ENST00000413219 B5MCH6 92 aa12.79□□□□□ -0.36
SDCBP-202ENST00000413219 DEFB131AP59861 70 aa12.79□□□□□ -0.36
SDCBP-202ENST00000413219 NPC2P61916 151 aa12.79□□□□□ -0.36
SDCBP-202ENST00000413219 CIRBPQ14011 172 aaKnown RBP12.79□□□□□ -0.36
SDCBP-202ENST00000413219 Q6ZSV7 163 aa12.79□□□□□ -0.36
SDCBP-202ENST00000413219 DUX5Q96PT3 197 aa12.79□□□□□ -0.36
SDCBP-202ENST00000413219 PRORYQ9H606 182 aa12.78□□□□□ -0.36
SDCBP-202ENST00000413219 Q9UF83 564 aa12.78□□□□□ -0.36
SDCBP-202ENST00000413219 CDKN2A-AS1Q9UH64 79 aa12.78□□□□□ -0.36
SDCBP-202ENST00000413219 SS18L2Q9UHA2 77 aa12.78□□□□□ -0.36
SDCBP-202ENST00000413219 DOPEY2Q9Y3R5 2298 aa12.78□□□□□ -0.36
SDCBP-202ENST00000413219 BEAN1Q3B7T3 259 aa12.77□□□□□ -0.36
SDCBP-202ENST00000413219 TMEM101Q96IK0 257 aa12.77□□□□□ -0.36
SDCBP-202ENST00000413219 RBMY1BA6NDE4 496 aaKnown RBP12.77□□□□□ -0.37
SDCBP-202ENST00000413219 RBMY1EA6NEQ0 496 aaKnown RBP12.77□□□□□ -0.37
SDCBP-202ENST00000413219 RBMY1DP0C7P1 496 aaKnown RBP12.77□□□□□ -0.37
SDCBP-202ENST00000413219 IGLV5-39A0A0G2JS06 123 aa12.76□□□□□ -0.37
SDCBP-202ENST00000413219 COPS9Q8WXC6 57 aa12.76□□□□□ -0.37
SDCBP-202ENST00000413219 DSCR9P59020 149 aa12.76□□□□□ -0.37
SDCBP-202ENST00000413219 CITED2Q99967 270 aaPredicted RBP12.76□□□□□ -0.37
SDCBP-202ENST00000413219 RS1O15537 224 aa12.75□□□□□ -0.37
SDCBP-202ENST00000413219 C11orf72Q8NBR9 251 aa12.75□□□□□ -0.37
SDCBP-202ENST00000413219 HERVK_113P63121 156 aa12.74□□□□□ -0.37
SDCBP-202ENST00000413219 FAM19A3Q7Z5A8 133 aa12.74□□□□□ -0.37
SDCBP-202ENST00000413219 LINC00308Q8TCZ7 52 aa12.74□□□□□ -0.37
SDCBP-202ENST00000413219 TRBV7-7A0A0K0K1E9 115 aa12.74□□□□□ -0.37
SDCBP-202ENST00000413219 ACYP1P07311 99 aa12.74□□□□□ -0.37
SDCBP-202ENST00000413219 CCDC179H3BU77 68 aa12.73□□□□□ -0.37
SDCBP-202ENST00000413219 DGAT2L7PQ6IED9 249 aa12.73□□□□□ -0.37
SDCBP-202ENST00000413219 VPREB3Q9UKI3 123 aa12.73□□□□□ -0.37
SDCBP-202ENST00000413219 ZFHX3Q15911 3703 aa12.73□□□□□ -0.37
SDCBP-202ENST00000413219 NACAE9PAV3 2078 aa12.73□□□□□ -0.37
SDCBP-202ENST00000413219 J3QLI3 93 aa12.73□□□□□ -0.37
SDCBP-202ENST00000413219 COX7A2LO14548 114 aa12.73□□□□□ -0.37
SDCBP-202ENST00000413219 DAND5Q8N907 189 aa12.73□□□□□ -0.37
SDCBP-202ENST00000413219 LINC01356Q8N9X3 169 aa12.73□□□□□ -0.37
SDCBP-202ENST00000413219 ZNF702PQ9H963 129 aa12.73□□□□□ -0.37
SDCBP-202ENST00000413219 IGHV3-38A0A0C4DH36 116 aa12.72□□□□□ -0.37
SDCBP-202ENST00000413219 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.72□□□□□ -0.37
SDCBP-202ENST00000413219 IGHV3OR16-12A0A075B7B8 117 aa12.71□□□□□ -0.37
SDCBP-202ENST00000413219 PRM2P04554 102 aa12.71□□□□□ -0.37
SDCBP-202ENST00000413219 LINC01587Q99440 93 aa12.71□□□□□ -0.37
SDCBP-202ENST00000413219 PPDPFQ9H3Y8 114 aa12.71□□□□□ -0.37
SDCBP-202ENST00000413219 Q9H8V8 135 aa12.71□□□□□ -0.37
SDCBP-202ENST00000413219 COX6A2Q02221 97 aa12.71□□□□□ -0.38
SDCBP-202ENST00000413219 LINC00242Q5T6M2 205 aa12.7□□□□□ -0.38
SDCBP-202ENST00000413219 SHISA2Q6UWI4 295 aa12.7□□□□□ -0.38
SDCBP-202ENST00000413219 INSP01308 110 aa12.69□□□□□ -0.38
SDCBP-202ENST00000413219 CSDC2Q9Y534 153 aaKnown RBP12.69□□□□□ -0.38
SDCBP-202ENST00000413219 SLURP1P55000 103 aa12.69□□□□□ -0.38
SDCBP-202ENST00000413219 IMUPQ9GZP8 106 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms