RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 XIRP1Q702N8 1843 aaKnown RBP-0.73□□□□□ -2.53
RNU2-54P-201ENST00000410299 DAPK1P53355 1430 aa-0.73□□□□□ -2.53
RNU2-54P-201ENST00000410299 PXDNQ92626 1479 aa-0.73□□□□□ -2.53
RNU2-54P-201ENST00000410299 UBR4Q5T4S7 5183 aa-0.74□□□□□ -2.53
RNU2-54P-201ENST00000410299 BICRAQ9NZM4 1560 aa-0.74□□□□□ -2.53
RNU2-54P-201ENST00000410299 TRAV36DV7A0A075B6V5 113 aa-0.74□□□□□ -2.53
RNU2-54P-201ENST00000410299 A0A1B0GV72 72 aa-0.74□□□□□ -2.53
RNU2-54P-201ENST00000410299 A0A1B0GX51 115 aa-0.74□□□□□ -2.53
RNU2-54P-201ENST00000410299 A6NIN4 97 aa-0.74□□□□□ -2.53
RNU2-54P-201ENST00000410299 SPINK4O60575 86 aa-0.74□□□□□ -2.53
RNU2-54P-201ENST00000410299 PIRTP0C851 137 aa-0.74□□□□□ -2.53
RNU2-54P-201ENST00000410299 CCL18P55774 89 aa-0.74□□□□□ -2.53
RNU2-54P-201ENST00000410299 TFAMQ00059 246 aaKnown RBP-0.74□□□□□ -2.53
RNU2-54P-201ENST00000410299 RPL7L1Q6DKI1 246 aaKnown RBP-0.74□□□□□ -2.53
RNU2-54P-201ENST00000410299 TCTE3Q8IZS6 198 aa-0.74□□□□□ -2.53
RNU2-54P-201ENST00000410299 SMIM4Q8WVI0 70 aa-0.74□□□□□ -2.53
RNU2-54P-201ENST00000410299 TNFSF15O95150 251 aa-0.75□□□□□ -2.53
RNU2-54P-201ENST00000410299 G0S2P27469 103 aa-0.75□□□□□ -2.53
RNU2-54P-201ENST00000410299 S100GP29377 79 aa-0.75□□□□□ -2.53
RNU2-54P-201ENST00000410299 GNG10P50151 68 aa-0.75□□□□□ -2.53
RNU2-54P-201ENST00000410299 SKA2Q8WVK7 121 aaPredicted RBP-0.75□□□□□ -2.53
RNU2-54P-201ENST00000410299 AGPAT4-IT1Q9H0P7 198 aa-0.75□□□□□ -2.53
RNU2-54P-201ENST00000410299 CENPHQ9H3R5 247 aa-0.75□□□□□ -2.53
RNU2-54P-201ENST00000410299 SAR1AQ9NR31 198 aa-0.75□□□□□ -2.53
RNU2-54P-201ENST00000410299 USP9YO00507 2555 aaPredicted RBP-0.75□□□□□ -2.53
RNU2-54P-201ENST00000410299 NCS1P62166 190 aa-0.76□□□□□ -2.53
RNU2-54P-201ENST00000410299 UBE2G1P62253 170 aa-0.76□□□□□ -2.53
RNU2-54P-201ENST00000410299 KLK9Q2XQG4 91 aa-0.76□□□□□ -2.53
RNU2-54P-201ENST00000410299 MIC13Q5XKP0 118 aa-0.76□□□□□ -2.53
RNU2-54P-201ENST00000410299 DEFB123Q8N688 67 aa-0.76□□□□□ -2.53
RNU2-54P-201ENST00000410299 HIGD1AQ9Y241 93 aa-0.76□□□□□ -2.53
RNU2-54P-201ENST00000410299 LINC00312Q9Y6C7 94 aa-0.76□□□□□ -2.53
RNU2-54P-201ENST00000410299 R4GMQ9 66 aa-0.76□□□□□ -2.53
RNU2-54P-201ENST00000410299 STARD9Q9P2P6 4700 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 ITPR3Q14573 2671 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 PRDM2Q13029 1718 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 ADGRB1O14514 1584 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 MRC1P22897 1456 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 ARHGEF10O15013 1369 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 TMEM2Q9UHN6 1383 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 M0R135 149 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 PPP1R17O96001 155 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 PIPP12273 146 aaPredicted RBP-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 CBLN1P23435 193 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 CMPK1P30085 196 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 CCL8P80075 99 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 COX17Q14061 63 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 SPTSSBQ8NFR3 76 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 CDC26Q8NHZ8 85 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 MAFIPQ8WZ33 124 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 DDA1Q9BW61 102 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 FXYD6Q9H0Q3 95 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 MRPL40Q9NQ50 206 aaKnown RBP-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 SPANXCQ9NY87 97 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 TACC2O95359 2948 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 NBPF19A0A087WUL8 3843 aa-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 GOLGA4Q13439 2230 aaKnown RBP-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 EPPK1P58107 5090 aaKnown RBP-0.77□□□□□ -2.53
RNU2-54P-201ENST00000410299 PBRM1Q86U86 1689 aa-0.78□□□□□ -2.53
RNU2-54P-201ENST00000410299 SYNJ1O43426 1573 aa-0.78□□□□□ -2.53
RNU2-54P-201ENST00000410299 HECTD1Q9ULT8 2610 aa-0.78□□□□□ -2.53
RNU2-54P-201ENST00000410299 DOPEY1Q5JWR5 2465 aa-0.78□□□□□ -2.53
RNU2-54P-201ENST00000410299 GAPVD1Q14C86 1478 aa-0.78□□□□□ -2.53
RNU2-54P-201ENST00000410299 CASKIN1Q8WXD9 1431 aa-0.78□□□□□ -2.53
RNU2-54P-201ENST00000410299 CTXND1A0A1B0GTU2 59 aa-0.78□□□□□ -2.53
RNU2-54P-201ENST00000410299 TNFP01375 233 aa-0.78□□□□□ -2.53
RNU2-54P-201ENST00000410299 Q6JHZ5 121 aa-0.78□□□□□ -2.53
RNU2-54P-201ENST00000410299 CTAGE3PQ8IX95 158 aa-0.78□□□□□ -2.53
RNU2-54P-201ENST00000410299 MMGT1Q8N4V1 131 aa-0.78□□□□□ -2.53
RNU2-54P-201ENST00000410299 HSPB11Q9Y547 144 aa-0.78□□□□□ -2.53
RNU2-54P-201ENST00000410299 V9GYQ6 96 aa-0.78□□□□□ -2.53
RNU2-54P-201ENST00000410299 MYH13Q9UKX3 1938 aa-0.78□□□□□ -2.53
RNU2-54P-201ENST00000410299 DNAH6Q9C0G6 4158 aa-0.78□□□□□ -2.53
RNU2-54P-201ENST00000410299 TSTD3H0UI37 97 aa-0.79□□□□□ -2.54
RNU2-54P-201ENST00000410299 IL5P05113 134 aa-0.79□□□□□ -2.54
RNU2-54P-201ENST00000410299 DBIP07108 87 aaKnown RBP-0.79□□□□□ -2.54
RNU2-54P-201ENST00000410299 CCDC153Q494R4 210 aa-0.79□□□□□ -2.54
RNU2-54P-201ENST00000410299 MORN2Q502X0 79 aa-0.79□□□□□ -2.54
RNU2-54P-201ENST00000410299 TMEM170BQ5T4T1 132 aa-0.79□□□□□ -2.54
RNU2-54P-201ENST00000410299 DEFB105AQ8NG35 78 aa-0.79□□□□□ -2.54
RNU2-54P-201ENST00000410299 AMELXQ99217 191 aa-0.79□□□□□ -2.54
RNU2-54P-201ENST00000410299 LINC00472Q9H8W2 130 aa-0.79□□□□□ -2.54
RNU2-54P-201ENST00000410299 GINS2Q9Y248 185 aa-0.79□□□□□ -2.54
RNU2-54P-201ENST00000410299 NWD2Q9ULI1 1742 aa-0.79□□□□□ -2.54
RNU2-54P-201ENST00000410299 KDM5AP29375 1690 aaKnown RBP-0.79□□□□□ -2.54
RNU2-54P-201ENST00000410299 NSD3Q9BZ95 1437 aa-0.8□□□□□ -2.54
RNU2-54P-201ENST00000410299 SPTBN4Q9H254 2564 aa-0.8□□□□□ -2.54
RNU2-54P-201ENST00000410299 SPAARA0A1B0GVQ0 90 aa-0.8□□□□□ -2.54
RNU2-54P-201ENST00000410299 PITX3O75364 302 aa-0.8□□□□□ -2.54
RNU2-54P-201ENST00000410299 SIX6O95475 246 aa-0.8□□□□□ -2.54
RNU2-54P-201ENST00000410299 ALX1Q15699 326 aa-0.8□□□□□ -2.54
RNU2-54P-201ENST00000410299 Q6ZUT4 128 aa-0.8□□□□□ -2.54
RNU2-54P-201ENST00000410299 SPTSSAQ969W0 71 aa-0.8□□□□□ -2.54
RNU2-54P-201ENST00000410299 PSMG3Q9BT73 122 aaPredicted RBP-0.8□□□□□ -2.54
RNU2-54P-201ENST00000410299 SPANXA1Q9NS26 97 aa-0.8□□□□□ -2.54
RNU2-54P-201ENST00000410299 LENEPQ9Y5L5 61 aa-0.8□□□□□ -2.54
RNU2-54P-201ENST00000410299 MYH8P13535 1937 aa-0.8□□□□□ -2.54
RNU2-54P-201ENST00000410299 SBF2Q86WG5 1849 aa-0.8□□□□□ -2.54
RNU2-54P-201ENST00000410299 ZNF236Q9UL36 1845 aa-0.8□□□□□ -2.54
RNU2-54P-201ENST00000410299 IFT140Q96RY7 1462 aa-0.8□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms