RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 Q0VG73 95 aa20.7■□□□□ 0.9
TRAF3IP1-203ENST00000409739 MRPL54Q6P161 138 aaKnown RBP20.7■□□□□ 0.9
TRAF3IP1-203ENST00000409739 ENHOQ6UWT2 76 aa20.7■□□□□ 0.9
TRAF3IP1-203ENST00000409739 IGKV2D-24A0A075B6R9 120 aa20.69■□□□□ 0.9
TRAF3IP1-203ENST00000409739 CRPP02741 224 aa20.69■□□□□ 0.9
TRAF3IP1-203ENST00000409739 PGPEP1Q9NXJ5 209 aa20.69■□□□□ 0.9
TRAF3IP1-203ENST00000409739 COX11Q9Y6N1 276 aa20.69■□□□□ 0.9
TRAF3IP1-203ENST00000409739 A0A1B0GXF2 115 aa20.68■□□□□ 0.9
TRAF3IP1-203ENST00000409739 SMKR1H3BMG3 65 aa20.68■□□□□ 0.9
TRAF3IP1-203ENST00000409739 NCR2O95944 276 aa20.68■□□□□ 0.9
TRAF3IP1-203ENST00000409739 FAM104BQ5XKR9 115 aa20.68■□□□□ 0.9
TRAF3IP1-203ENST00000409739 CDPF1Q6NVV7 123 aa20.68■□□□□ 0.9
TRAF3IP1-203ENST00000409739 MAPKAPK5-AS1Q8N8E1 139 aa20.68■□□□□ 0.9
TRAF3IP1-203ENST00000409739 ST20Q9HBF5 79 aa20.68■□□□□ 0.9
TRAF3IP1-203ENST00000409739 HBBP68871 147 aa20.67■□□□□ 0.9
TRAF3IP1-203ENST00000409739 TMEM218A2RU14 115 aa20.66■□□□□ 0.9
TRAF3IP1-203ENST00000409739 MT-ND4LP03901 98 aa20.66■□□□□ 0.9
TRAF3IP1-203ENST00000409739 WFDC2Q14508 124 aa20.66■□□□□ 0.9
TRAF3IP1-203ENST00000409739 MRPL51Q4U2R6 128 aaKnown RBP20.66■□□□□ 0.9
TRAF3IP1-203ENST00000409739 COMMD7Q86VX2 200 aa20.66■□□□□ 0.9
TRAF3IP1-203ENST00000409739 ANAPC16Q96DE5 110 aa20.66■□□□□ 0.9
TRAF3IP1-203ENST00000409739 TMEM70Q9BUB7 260 aa20.66■□□□□ 0.9
TRAF3IP1-203ENST00000409739 I3L3M4 83 aa20.65■□□□□ 0.9
TRAF3IP1-203ENST00000409739 UBE2L6O14933 153 aa20.65■□□□□ 0.9
TRAF3IP1-203ENST00000409739 PRR34Q9NV39 138 aa20.65■□□□□ 0.9
TRAF3IP1-203ENST00000409739 A0A1B0GUV1 79 aa20.64■□□□□ 0.89
TRAF3IP1-203ENST00000409739 APCSP02743 223 aa20.64■□□□□ 0.89
TRAF3IP1-203ENST00000409739 S100A8P05109 93 aa20.64■□□□□ 0.89
TRAF3IP1-203ENST00000409739 CLPSL2Q6UWE3 100 aa20.64■□□□□ 0.89
TRAF3IP1-203ENST00000409739 Q8N814 137 aa20.64■□□□□ 0.89
TRAF3IP1-203ENST00000409739 NRACQ8N912 160 aa20.64■□□□□ 0.89
TRAF3IP1-203ENST00000409739 C20orf203Q8NBC4 194 aa20.64■□□□□ 0.89
TRAF3IP1-203ENST00000409739 PMCHP20382 165 aa20.63■□□□□ 0.89
TRAF3IP1-203ENST00000409739 POLR2KP53803 58 aaKnown RBP20.63■□□□□ 0.89
TRAF3IP1-203ENST00000409739 LINC00269Q8N2A0 174 aa20.63■□□□□ 0.89
TRAF3IP1-203ENST00000409739 C1orf43Q9BWL3 253 aa20.63■□□□□ 0.89
TRAF3IP1-203ENST00000409739 IGLV4-60A0A075B6I1 120 aa20.62■□□□□ 0.89
TRAF3IP1-203ENST00000409739 F8W036 122 aa20.62■□□□□ 0.89
TRAF3IP1-203ENST00000409739 MIAQ16674 131 aa20.62■□□□□ 0.89
TRAF3IP1-203ENST00000409739 ATP5L2Q7Z4Y8 100 aa20.62■□□□□ 0.89
TRAF3IP1-203ENST00000409739 LECT2O14960 151 aa20.61■□□□□ 0.89
TRAF3IP1-203ENST00000409739 PPP1R17O96001 155 aa20.6■□□□□ 0.89
TRAF3IP1-203ENST00000409739 TSHBP01222 138 aa20.6■□□□□ 0.89
TRAF3IP1-203ENST00000409739 BAALCQ8WXS3 180 aa20.6■□□□□ 0.89
TRAF3IP1-203ENST00000409739 TMEM242Q9NWH2 141 aa20.6■□□□□ 0.89
TRAF3IP1-203ENST00000409739 TRBV27A0A0K0K1C4 114 aa20.59■□□□□ 0.89
TRAF3IP1-203ENST00000409739 IGKV2D-29A0A075B6S2 120 aaPredicted RBP20.58■□□□□ 0.89
TRAF3IP1-203ENST00000409739 IGKV2-29A2NJV5 120 aaPredicted RBP20.58■□□□□ 0.89
TRAF3IP1-203ENST00000409739 LINC00862A6NCI5 91 aa20.58■□□□□ 0.89
TRAF3IP1-203ENST00000409739 REG3AQ06141 175 aa20.58■□□□□ 0.89
TRAF3IP1-203ENST00000409739 NTN5Q8WTR8 489 aaPredicted RBP20.58■□□□□ 0.89
TRAF3IP1-203ENST00000409739 SEC11CQ9BY50 192 aa20.58■□□□□ 0.89
TRAF3IP1-203ENST00000409739 HERC2O95714 4834 aa20.58■□□□□ 0.89
TRAF3IP1-203ENST00000409739 SUMO2P61956 95 aaKnown RBP20.57■□□□□ 0.88
TRAF3IP1-203ENST00000409739 H7C423 109 aa20.55■□□□□ 0.88
TRAF3IP1-203ENST00000409739 CDK2AP2O75956 126 aa20.55■□□□□ 0.88
TRAF3IP1-203ENST00000409739 CKS2P33552 79 aa20.55■□□□□ 0.88
TRAF3IP1-203ENST00000409739 IGLV5-52A0A0A0MRZ9 124 aa20.54■□□□□ 0.88
TRAF3IP1-203ENST00000409739 ESDP10768 282 aa20.54■□□□□ 0.88
TRAF3IP1-203ENST00000409739 D6R8Y8 96 aa20.53■□□□□ 0.88
TRAF3IP1-203ENST00000409739 VCYO14598 125 aa20.53■□□□□ 0.88
TRAF3IP1-203ENST00000409739 AMMECR1LQ6DCA0 310 aa20.53■□□□□ 0.88
TRAF3IP1-203ENST00000409739 FGF6P10767 208 aa20.52■□□□□ 0.88
TRAF3IP1-203ENST00000409739 KRTAP26-1Q6PEX3 210 aa20.52■□□□□ 0.88
TRAF3IP1-203ENST00000409739 APOBP04114 4563 aaKnown RBP20.52■□□□□ 0.88
TRAF3IP1-203ENST00000409739 HSPG2P98160 4391 aa20.51■□□□□ 0.87
TRAF3IP1-203ENST00000409739 TRBV24-1A0A075B6N3 115 aa20.51■□□□□ 0.87
TRAF3IP1-203ENST00000409739 HLA-DQA1P01909 254 aa20.51■□□□□ 0.87
TRAF3IP1-203ENST00000409739 TNFRSF6BO95407 300 aa20.5■□□□□ 0.87
TRAF3IP1-203ENST00000409739 KRTAP10-1P60331 282 aa20.5■□□□□ 0.87
TRAF3IP1-203ENST00000409739 RNASEKQ6P5S7 137 aaKnown RBP20.5■□□□□ 0.87
TRAF3IP1-203ENST00000409739 C20orf78Q9BR46 151 aa20.5■□□□□ 0.87
TRAF3IP1-203ENST00000409739 IGLV10-54A0A075B6I4 117 aa20.49■□□□□ 0.87
TRAF3IP1-203ENST00000409739 GCSHP23434 173 aa20.49■□□□□ 0.87
TRAF3IP1-203ENST00000409739 BTF3L4Q96K17 158 aa20.49■□□□□ 0.87
TRAF3IP1-203ENST00000409739 IGLV2-33A0A075B6J2 118 aaPredicted RBP20.48■□□□□ 0.87
TRAF3IP1-203ENST00000409739 C7orf77A4D0Y5 90 aa20.48■□□□□ 0.87
TRAF3IP1-203ENST00000409739 NPYP01303 97 aa20.48■□□□□ 0.87
TRAF3IP1-203ENST00000409739 PPBPP02775 128 aa20.48■□□□□ 0.87
TRAF3IP1-203ENST00000409739 ZNF25P17030 456 aaPredicted RBP20.48■□□□□ 0.87
TRAF3IP1-203ENST00000409739 IMMP2LQ96T52 175 aa20.48■□□□□ 0.87
TRAF3IP1-203ENST00000409739 CTDSP1Q9GZU7 261 aa20.48■□□□□ 0.87
TRAF3IP1-203ENST00000409739 RYR1P21817 5038 aa20.48■□□□□ 0.87
TRAF3IP1-203ENST00000409739 TRAV8-4A0A0B4J246 113 aa20.47■□□□□ 0.87
TRAF3IP1-203ENST00000409739 FCER1GP30273 86 aa20.47■□□□□ 0.87
TRAF3IP1-203ENST00000409739 RPL32P62910 135 aaKnown RBP20.47■□□□□ 0.87
TRAF3IP1-203ENST00000409739 C10orf91Q5T1B1 145 aa20.47■□□□□ 0.87
TRAF3IP1-203ENST00000409739 KIR2DL4Q99706 377 aa20.47■□□□□ 0.87
TRAF3IP1-203ENST00000409739 PHOX2AO14813 284 aa20.45■□□□□ 0.86
TRAF3IP1-203ENST00000409739 ORMDL3Q8N138 153 aa20.45■□□□□ 0.86
TRAF3IP1-203ENST00000409739 CARHSP1Q9Y2V2 147 aaKnown RBP20.45■□□□□ 0.86
TRAF3IP1-203ENST00000409739 SMIM2Q9BVW6 85 aa20.44■□□□□ 0.86
TRAF3IP1-203ENST00000409739 MRPL52Q86TS9 123 aaKnown RBP20.43■□□□□ 0.86
TRAF3IP1-203ENST00000409739 IGKV3OR2-268A0A0C4DH90 116 aa20.42■□□□□ 0.86
TRAF3IP1-203ENST00000409739 USP17L23D6RBM5 183 aa20.42■□□□□ 0.86
TRAF3IP1-203ENST00000409739 TMEM136Q6ZRR5 245 aa20.42■□□□□ 0.86
TRAF3IP1-203ENST00000409739 C14orf177Q52M58 125 aa20.41■□□□□ 0.86
TRAF3IP1-203ENST00000409739 TMEM101Q96IK0 257 aa20.41■□□□□ 0.86
TRAF3IP1-203ENST00000409739 PRELID3AQ96N28 172 aa20.41■□□□□ 0.86
TRAF3IP1-203ENST00000409739 OR5A1Q8NGJ0 315 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms