RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 TIMM17AQ99595 171 aa4.53□□□□□ -1.68
GTF3C3-202ENST00000409364 TRGV1A0A0A0MS02 117 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 IGHV3-73A0A0B4J1V6 119 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 IGIPA6NJ69 53 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 F8VRH5 84 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 DLEU1O43261 78 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 RRN3P1Q2M238 152 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 PAPPA-AS1Q5QFB9 102 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 MRPL16Q9NX20 251 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 MRPL35Q9NZE8 188 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 TP53TG1Q9Y2A0 90 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 CUBNO60494 3623 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 PRSS29PA6NIE9 313 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 SIVA1O15304 175 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 TSHBP01222 138 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 PMVKQ15126 192 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 BOD1L2Q8IYS8 172 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 C20orf203Q8NBC4 194 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 BAALCQ8WXS3 180 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 OVOL2Q9BRP0 275 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 WFDC10AQ9H1F0 79 aa4.52□□□□□ -1.69
GTF3C3-202ENST00000409364 TRAV4A0A0B4J268 109 aa4.51□□□□□ -1.69
GTF3C3-202ENST00000409364 TRBV10-1A0A0K0K1A3 114 aa4.51□□□□□ -1.69
GTF3C3-202ENST00000409364 P0DMU3 169 aa4.51□□□□□ -1.69
GTF3C3-202ENST00000409364 FAM231AP0DMU4 169 aa4.51□□□□□ -1.69
GTF3C3-202ENST00000409364 FAM231CP0DMU5 169 aa4.51□□□□□ -1.69
GTF3C3-202ENST00000409364 COL5A1-AS1Q5SY13 56 aa4.51□□□□□ -1.69
GTF3C3-202ENST00000409364 ZC2HC1BQ5TFG8 222 aa4.51□□□□□ -1.69
GTF3C3-202ENST00000409364 C12orf54Q6X4T0 127 aa4.51□□□□□ -1.69
GTF3C3-202ENST00000409364 Q6ZSN1 163 aa4.51□□□□□ -1.69
GTF3C3-202ENST00000409364 CST9LQ9H4G1 147 aa4.51□□□□□ -1.69
GTF3C3-202ENST00000409364 NOP10Q9NPE3 64 aaKnown RBP4.51□□□□□ -1.69
GTF3C3-202ENST00000409364 JMJD1CQ15652 2540 aa4.51□□□□□ -1.69
GTF3C3-202ENST00000409364 NOTCH3Q9UM47 2321 aa4.5□□□□□ -1.69
GTF3C3-202ENST00000409364 SMIM9A6NGZ8 99 aa4.5□□□□□ -1.69
GTF3C3-202ENST00000409364 NPSP0C0P6 89 aa4.5□□□□□ -1.69
GTF3C3-202ENST00000409364 NMUP48645 174 aa4.5□□□□□ -1.69
GTF3C3-202ENST00000409364 CRYBA4P53673 196 aa4.5□□□□□ -1.69
GTF3C3-202ENST00000409364 RPL39P62891 51 aaKnown RBP4.5□□□□□ -1.69
GTF3C3-202ENST00000409364 BATFQ16520 125 aa4.5□□□□□ -1.69
GTF3C3-202ENST00000409364 Q6ZTI0 123 aa4.5□□□□□ -1.69
GTF3C3-202ENST00000409364 KIR2DL5BQ8NHK3 375 aa4.5□□□□□ -1.69
GTF3C3-202ENST00000409364 PYGO1Q9Y3Y4 419 aa4.5□□□□□ -1.69
GTF3C3-202ENST00000409364 NIPBLQ6KC79 2804 aaeCLIP4.5□□□□□ -1.69
GTF3C3-202ENST00000409364 TRBV7-3A0A075B6L6 115 aa4.49□□□□□ -1.69
GTF3C3-202ENST00000409364 TRGV2A0A075B6R0 118 aa4.49□□□□□ -1.69
GTF3C3-202ENST00000409364 PLAC8L1A1L4L8 177 aa4.49□□□□□ -1.69
GTF3C3-202ENST00000409364 FGF6P10767 208 aa4.49□□□□□ -1.69
GTF3C3-202ENST00000409364 RPL36AP83881 106 aaKnown RBP4.49□□□□□ -1.69
GTF3C3-202ENST00000409364 DEFB104AQ8WTQ1 72 aa4.49□□□□□ -1.69
GTF3C3-202ENST00000409364 RPL36ALQ969Q0 106 aaKnown RBP4.49□□□□□ -1.69
GTF3C3-202ENST00000409364 ZNF479Q96JC4 524 aa4.49□□□□□ -1.69
GTF3C3-202ENST00000409364 VCX2Q9H322 139 aa4.49□□□□□ -1.69
GTF3C3-202ENST00000409364 TRBV6-4A0A1B0GX49 114 aa4.49□□□□□ -1.69
GTF3C3-202ENST00000409364 HINT1P49773 126 aaPredicted RBP4.49□□□□□ -1.69
GTF3C3-202ENST00000409364 APOC4P55056 127 aa4.49□□□□□ -1.69
GTF3C3-202ENST00000409364 MPV17L2Q567V2 206 aa4.49□□□□□ -1.69
GTF3C3-202ENST00000409364 TMEM97Q5BJF2 176 aa4.49□□□□□ -1.69
GTF3C3-202ENST00000409364 DAZ4Q86SG3 579 aaKnown RBP4.49□□□□□ -1.69
GTF3C3-202ENST00000409364 ZNRF2Q8NHG8 242 aa4.49□□□□□ -1.69
GTF3C3-202ENST00000409364 DAZ3Q9NR90 486 aaKnown RBP4.49□□□□□ -1.69
GTF3C3-202ENST00000409364 A0A1B0GV90 55 aa4.48□□□□□ -1.69
GTF3C3-202ENST00000409364 GAGE12BA1L429 117 aa4.48□□□□□ -1.69
GTF3C3-202ENST00000409364 K7EQD1 137 aa4.48□□□□□ -1.69
GTF3C3-202ENST00000409364 GAGE7O76087 117 aa4.48□□□□□ -1.69
GTF3C3-202ENST00000409364 GAGE12FP0CL80 117 aa4.48□□□□□ -1.69
GTF3C3-202ENST00000409364 GAGE12GP0CL81 117 aa4.48□□□□□ -1.69
GTF3C3-202ENST00000409364 GAGE12IP0CL82 117 aa4.48□□□□□ -1.69
GTF3C3-202ENST00000409364 HERVK_113P61574 105 aa4.48□□□□□ -1.69
GTF3C3-202ENST00000409364 SMAGPQ0VAQ4 97 aa4.48□□□□□ -1.69
GTF3C3-202ENST00000409364 C2orf91Q6ZV80 131 aa4.48□□□□□ -1.69
GTF3C3-202ENST00000409364 PCP2Q8IVA1 136 aa4.48□□□□□ -1.69
GTF3C3-202ENST00000409364 SPANXA1Q9NS26 97 aa4.48□□□□□ -1.69
GTF3C3-202ENST00000409364 HIGD1BQ9P298 99 aa4.48□□□□□ -1.69
GTF3C3-202ENST00000409364 Q9UF83 564 aa4.48□□□□□ -1.69
GTF3C3-202ENST00000409364 ATRQ13535 2644 aa4.47□□□□□ -1.69
GTF3C3-202ENST00000409364 IGLV4-3A0A075B6K6 122 aa4.47□□□□□ -1.69
GTF3C3-202ENST00000409364 IGKV2D-26A0A0A0MRZ7 120 aa4.47□□□□□ -1.69
GTF3C3-202ENST00000409364 E9PLD3 99 aa4.47□□□□□ -1.69
GTF3C3-202ENST00000409364 BVES-AS1Q5T3Y7 98 aa4.47□□□□□ -1.69
GTF3C3-202ENST00000409364 SHISA2Q6UWI4 295 aa4.47□□□□□ -1.69
GTF3C3-202ENST00000409364 NFE4Q86UQ8 179 aa4.47□□□□□ -1.69
GTF3C3-202ENST00000409364 SLC25A29Q8N8R3 303 aa4.47□□□□□ -1.69
GTF3C3-202ENST00000409364 OR11H2Q8NH07 326 aa4.47□□□□□ -1.69
GTF3C3-202ENST00000409364 SPATA3Q8NHX4 192 aa4.47□□□□□ -1.69
GTF3C3-202ENST00000409364 CHCHD7Q9BUK0 85 aa4.47□□□□□ -1.69
GTF3C3-202ENST00000409364 IGLV4-69A0A075B6H9 119 aa4.46□□□□□ -1.69
GTF3C3-202ENST00000409364 TRAV8-6A0A0B4J262 113 aa4.46□□□□□ -1.69
GTF3C3-202ENST00000409364 TRGV4A0A0C4DH28 118 aa4.46□□□□□ -1.69
GTF3C3-202ENST00000409364 C11orf86A6NJI1 115 aa4.46□□□□□ -1.69
GTF3C3-202ENST00000409364 TCTAP57738 103 aa4.46□□□□□ -1.69
GTF3C3-202ENST00000409364 UBE2D3P61077 147 aa4.46□□□□□ -1.69
GTF3C3-202ENST00000409364 UBE2D2P62837 147 aa4.46□□□□□ -1.69
GTF3C3-202ENST00000409364 SEC11AP67812 179 aa4.46□□□□□ -1.69
GTF3C3-202ENST00000409364 HSD52Q0P140 79 aa4.46□□□□□ -1.69
GTF3C3-202ENST00000409364 KRTAP24-1Q3LI83 254 aa4.46□□□□□ -1.69
GTF3C3-202ENST00000409364 C3orf56Q8N813 242 aa4.46□□□□□ -1.69
GTF3C3-202ENST00000409364 PHLDA1Q8WV24 401 aaPredicted RBP4.46□□□□□ -1.69
GTF3C3-202ENST00000409364 AMELXQ99217 191 aa4.46□□□□□ -1.69
GTF3C3-202ENST00000409364 PRADC1Q9BSG0 188 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms