RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 YAE1D1Q9NRH1 226 aa7.17□□□□□ -1.26
MSH2-202ENST00000406134 F5H697 171 aa7.17□□□□□ -1.26
MSH2-202ENST00000406134 GAGE5Q13069 117 aa7.17□□□□□ -1.26
MSH2-202ENST00000406134 GAGE6Q13070 117 aa7.17□□□□□ -1.26
MSH2-202ENST00000406134 ETDBQ3ZM63 59 aa7.17□□□□□ -1.26
MSH2-202ENST00000406134 TRPT1Q86TN4 253 aaKnown RBP7.17□□□□□ -1.26
MSH2-202ENST00000406134 C11orf72Q8NBR9 251 aa7.17□□□□□ -1.26
MSH2-202ENST00000406134 LITAFQ99732 161 aa7.17□□□□□ -1.26
MSH2-202ENST00000406134 WNK1Q9H4A3 2382 aa7.17□□□□□ -1.26
MSH2-202ENST00000406134 ELANEP08246 267 aa7.16□□□□□ -1.26
MSH2-202ENST00000406134 C10orf126Q8N4M7 172 aa7.16□□□□□ -1.26
MSH2-202ENST00000406134 BEX4Q9NWD9 120 aaPredicted RBP7.16□□□□□ -1.26
MSH2-202ENST00000406134 TGFAP01135 160 aa7.16□□□□□ -1.26
MSH2-202ENST00000406134 ITPR3Q14573 2671 aa7.16□□□□□ -1.26
MSH2-202ENST00000406134 H3BMM0 161 aa7.16□□□□□ -1.26
MSH2-202ENST00000406134 J3QQQ9 107 aa7.15□□□□□ -1.26
MSH2-202ENST00000406134 DUX3Q96PT4 197 aa7.15□□□□□ -1.26
MSH2-202ENST00000406134 ZNF462Q96JM2 2506 aa7.15□□□□□ -1.26
MSH2-202ENST00000406134 RHODO00212 210 aa7.15□□□□□ -1.26
MSH2-202ENST00000406134 CEMP1Q6PRD7 247 aaPredicted RBP7.15□□□□□ -1.26
MSH2-202ENST00000406134 CHCHD7Q9BUK0 85 aa7.15□□□□□ -1.26
MSH2-202ENST00000406134 I3L3M4 83 aa7.15□□□□□ -1.27
MSH2-202ENST00000406134 PAPPA-AS1Q5QFB9 102 aa7.15□□□□□ -1.27
MSH2-202ENST00000406134 ZNF418Q8TF45 676 aaPredicted RBP7.15□□□□□ -1.27
MSH2-202ENST00000406134 SPATA25Q9BR10 227 aa7.15□□□□□ -1.27
MSH2-202ENST00000406134 IGHV3-73A0A0B4J1V6 119 aa7.14□□□□□ -1.27
MSH2-202ENST00000406134 A0A0J9YXV3 536 aa7.14□□□□□ -1.27
MSH2-202ENST00000406134 TMEM170BQ5T4T1 132 aa7.14□□□□□ -1.27
MSH2-202ENST00000406134 SYT8Q8NBV8 401 aa7.14□□□□□ -1.27
MSH2-202ENST00000406134 TNFRSF18Q9Y5U5 241 aa7.14□□□□□ -1.27
MSH2-202ENST00000406134 GAGE13Q4V321 117 aa7.14□□□□□ -1.27
MSH2-202ENST00000406134 SCGB1D4Q6XE38 83 aa7.14□□□□□ -1.27
MSH2-202ENST00000406134 SBSPONQ8IVN8 264 aa7.14□□□□□ -1.27
MSH2-202ENST00000406134 TMEM61Q8N0U2 210 aa7.14□□□□□ -1.27
MSH2-202ENST00000406134 LEPROTO15243 131 aa7.14□□□□□ -1.27
MSH2-202ENST00000406134 TCL1BO95988 128 aa7.14□□□□□ -1.27
MSH2-202ENST00000406134 SFTA2Q6UW10 78 aa7.14□□□□□ -1.27
MSH2-202ENST00000406134 MRPS36P82909 103 aaKnown RBP7.13□□□□□ -1.27
MSH2-202ENST00000406134 TMEM263Q8WUH6 116 aaKnown RBP7.13□□□□□ -1.27
MSH2-202ENST00000406134 DEFB131AP59861 70 aa7.13□□□□□ -1.27
MSH2-202ENST00000406134 IL17DQ8TAD2 202 aa7.13□□□□□ -1.27
MSH2-202ENST00000406134 CARD19Q96LW7 228 aa7.13□□□□□ -1.27
MSH2-202ENST00000406134 PYGO1Q9Y3Y4 419 aa7.13□□□□□ -1.27
MSH2-202ENST00000406134 MAP6D1Q9H9H5 199 aa7.13□□□□□ -1.27
MSH2-202ENST00000406134 ERG28Q9UKR5 140 aa7.13□□□□□ -1.27
MSH2-202ENST00000406134 MTORP42345 2549 aa7.13□□□□□ -1.27
MSH2-202ENST00000406134 TRGV11A0A075B6L2 103 aa7.12□□□□□ -1.27
MSH2-202ENST00000406134 IGHV3-64A0A075B6Q5 118 aa7.12□□□□□ -1.27
MSH2-202ENST00000406134 M0R2P5 195 aa7.12□□□□□ -1.27
MSH2-202ENST00000406134 APOMO95445 188 aa7.12□□□□□ -1.27
MSH2-202ENST00000406134 CD28P10747 220 aa7.12□□□□□ -1.27
MSH2-202ENST00000406134 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.12□□□□□ -1.27
MSH2-202ENST00000406134 PTH2Q96A98 100 aa7.12□□□□□ -1.27
MSH2-202ENST00000406134 UBE2D4Q9Y2X8 147 aa7.12□□□□□ -1.27
MSH2-202ENST00000406134 JMJD1CQ15652 2540 aa7.12□□□□□ -1.27
MSH2-202ENST00000406134 RNASE13Q5GAN3 156 aaKnown RBP7.12□□□□□ -1.27
MSH2-202ENST00000406134 LINC00467Q9BRT7 94 aa7.12□□□□□ -1.27
MSH2-202ENST00000406134 C1QTNF4Q9BXJ3 329 aa7.12□□□□□ -1.27
MSH2-202ENST00000406134 CDIP1Q9H305 208 aa7.12□□□□□ -1.27
MSH2-202ENST00000406134 MT-ATP8P03928 68 aa7.11□□□□□ -1.27
MSH2-202ENST00000406134 HERVK_113P61574 105 aa7.11□□□□□ -1.27
MSH2-202ENST00000406134 SRSF9Q13242 221 aaKnown RBP eCLIP7.11□□□□□ -1.27
MSH2-202ENST00000406134 TRAV2A0A0B4J234 112 aa7.11□□□□□ -1.27
MSH2-202ENST00000406134 C4orf3Q8WVX3 66 aa7.11□□□□□ -1.27
MSH2-202ENST00000406134 TRAV8-3A0A0A6YYJ7 113 aa7.1□□□□□ -1.27
MSH2-202ENST00000406134 A0A0J9YXY3 114 aa7.1□□□□□ -1.27
MSH2-202ENST00000406134 A4D1N5 150 aa7.1□□□□□ -1.27
MSH2-202ENST00000406134 A8MZ25 164 aa7.1□□□□□ -1.27
MSH2-202ENST00000406134 IGHV3-30-3P0DP02 117 aa7.1□□□□□ -1.27
MSH2-202ENST00000406134 BEAN1Q3B7T3 259 aa7.1□□□□□ -1.27
MSH2-202ENST00000406134 ADAMTSL4-AS1Q5T5F5 129 aa7.1□□□□□ -1.27
MSH2-202ENST00000406134 PIK3CD-AS1Q5SR53 167 aa7.1□□□□□ -1.27
MSH2-202ENST00000406134 M0QXV9 152 aa7.1□□□□□ -1.27
MSH2-202ENST00000406134 IGHV3-33P01772 117 aa7.1□□□□□ -1.27
MSH2-202ENST00000406134 FOXI1Q12951 378 aa7.1□□□□□ -1.27
MSH2-202ENST00000406134 SPXQ9BT56 116 aa7.1□□□□□ -1.27
MSH2-202ENST00000406134 DEFB114Q30KQ6 69 aa7.09□□□□□ -1.27
MSH2-202ENST00000406134 MUSTN1Q8IVN3 82 aa7.09□□□□□ -1.27
MSH2-202ENST00000406134 ATP6V0E2Q8NHE4 81 aa7.09□□□□□ -1.27
MSH2-202ENST00000406134 ODF3L2Q3SX64 289 aa7.09□□□□□ -1.27
MSH2-202ENST00000406134 ADARB2-AS1A8MUL3 147 aa7.09□□□□□ -1.27
MSH2-202ENST00000406134 HTN1P15515 57 aa7.09□□□□□ -1.27
MSH2-202ENST00000406134 PSMB2P49721 201 aa7.09□□□□□ -1.27
MSH2-202ENST00000406134 ACANP16112 2415 aa7.08□□□□□ -1.28
MSH2-202ENST00000406134 Q6ZUT4 128 aa7.08□□□□□ -1.28
MSH2-202ENST00000406134 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.08□□□□□ -1.28
MSH2-202ENST00000406134 A0A0B4J2C4 111 aa7.08□□□□□ -1.28
MSH2-202ENST00000406134 IGKV2-29A2NJV5 120 aaPredicted RBP7.08□□□□□ -1.28
MSH2-202ENST00000406134 LGALS3P17931 250 aaKnown RBP7.08□□□□□ -1.28
MSH2-202ENST00000406134 PRO1854Q9UHT4 67 aa7.08□□□□□ -1.28
MSH2-202ENST00000406134 C1orf158Q8N1D5 194 aa7.08□□□□□ -1.28
MSH2-202ENST00000406134 ZNF843Q8N446 348 aa7.08□□□□□ -1.28
MSH2-202ENST00000406134 TRBV20-1A0A075B6N2 111 aa7.07□□□□□ -1.28
MSH2-202ENST00000406134 RS1O15537 224 aa7.07□□□□□ -1.28
MSH2-202ENST00000406134 IGHV3-53P01767 116 aa7.07□□□□□ -1.28
MSH2-202ENST00000406134 DEFB113Q30KQ7 82 aa7.07□□□□□ -1.28
MSH2-202ENST00000406134 A8MWV9 139 aa7.07□□□□□ -1.28
MSH2-202ENST00000406134 Q6ZSV7 163 aa7.07□□□□□ -1.28
MSH2-202ENST00000406134 RAX2Q96IS3 184 aa7.07□□□□□ -1.28
MSH2-202ENST00000406134 VCX2Q9H322 139 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms