RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ZNRF2Q8NHG8 242 aa14.85□□□□□ -0.03
TPM1-208ENST00000404484 S100A12P80511 92 aa14.84□□□□□ -0.03
TPM1-208ENST00000404484 DAZ4Q86SG3 579 aaKnown RBP14.84□□□□□ -0.03
TPM1-208ENST00000404484 C11orf68Q9H3H3 251 aaKnown RBP14.84□□□□□ -0.03
TPM1-208ENST00000404484 RETNQ9HD89 108 aa14.84□□□□□ -0.03
TPM1-208ENST00000404484 DAZ3Q9NR90 486 aaKnown RBP14.84□□□□□ -0.03
TPM1-208ENST00000404484 COTL1Q14019 142 aa14.83□□□□□ -0.04
TPM1-208ENST00000404484 Q8N976 141 aa14.83□□□□□ -0.04
TPM1-208ENST00000404484 Q9UF83 564 aa14.83□□□□□ -0.04
TPM1-208ENST00000404484 HHLA3Q9XRX5 114 aa14.83□□□□□ -0.04
TPM1-208ENST00000404484 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.82□□□□□ -0.04
TPM1-208ENST00000404484 SCGB3A1Q96QR1 104 aa14.82□□□□□ -0.04
TPM1-208ENST00000404484 SPATA25Q9BR10 227 aa14.82□□□□□ -0.04
TPM1-208ENST00000404484 ATP5G1P05496 136 aa14.81□□□□□ -0.04
TPM1-208ENST00000404484 UBE2D3P61077 147 aa14.81□□□□□ -0.04
TPM1-208ENST00000404484 UBE2D2P62837 147 aa14.81□□□□□ -0.04
TPM1-208ENST00000404484 WWC2-AS2Q96NR7 200 aa14.81□□□□□ -0.04
TPM1-208ENST00000404484 PRO0255Q9UI72 69 aa14.81□□□□□ -0.04
TPM1-208ENST00000404484 CELA1Q9UNI1 258 aa14.81□□□□□ -0.04
TPM1-208ENST00000404484 GAGE12JA6NER3 117 aa14.81□□□□□ -0.04
TPM1-208ENST00000404484 GAGE1Q13065 139 aa14.81□□□□□ -0.04
TPM1-208ENST00000404484 GAGE4Q13068 117 aa14.81□□□□□ -0.04
TPM1-208ENST00000404484 GAGE5Q13069 117 aa14.81□□□□□ -0.04
TPM1-208ENST00000404484 GAGE13Q4V321 117 aa14.81□□□□□ -0.04
TPM1-208ENST00000404484 ERASQ7Z444 233 aa14.81□□□□□ -0.04
TPM1-208ENST00000404484 C20orf203Q8NBC4 194 aa14.8□□□□□ -0.04
TPM1-208ENST00000404484 H0Y8G0 127 aa14.79□□□□□ -0.04
TPM1-208ENST00000404484 PRSS1P07477 247 aa14.79□□□□□ -0.04
TPM1-208ENST00000404484 CRYBA4P53673 196 aa14.79□□□□□ -0.04
TPM1-208ENST00000404484 LINC01545Q5VT33 79 aa14.79□□□□□ -0.04
TPM1-208ENST00000404484 LGALS9CQ6DKI2 356 aa14.79□□□□□ -0.04
TPM1-208ENST00000404484 Q6ZN92 141 aa14.79□□□□□ -0.04
TPM1-208ENST00000404484 TEX43Q6ZNM6 134 aa14.79□□□□□ -0.04
TPM1-208ENST00000404484 PHLDA1Q8WV24 401 aaPredicted RBP14.79□□□□□ -0.04
TPM1-208ENST00000404484 CDPF1Q6NVV7 123 aa14.78□□□□□ -0.04
TPM1-208ENST00000404484 TMEM141Q96I45 108 aa14.78□□□□□ -0.04
TPM1-208ENST00000404484 DEFB104AQ8WTQ1 72 aa14.77□□□□□ -0.04
TPM1-208ENST00000404484 TIMM17AQ99595 171 aa14.77□□□□□ -0.04
TPM1-208ENST00000404484 IGHV3-38A0A0C4DH36 116 aa14.77□□□□□ -0.05
TPM1-208ENST00000404484 PAX4O43316 350 aa14.75□□□□□ -0.05
TPM1-208ENST00000404484 LINC00694P0DN24 101 aa14.75□□□□□ -0.05
TPM1-208ENST00000404484 RPL39P62891 51 aaKnown RBP14.75□□□□□ -0.05
TPM1-208ENST00000404484 TMEM97Q5BJF2 176 aa14.75□□□□□ -0.05
TPM1-208ENST00000404484 VAMP8Q9BV40 100 aa14.75□□□□□ -0.05
TPM1-208ENST00000404484 GTSF1LQ9H1H1 148 aa14.75□□□□□ -0.05
TPM1-208ENST00000404484 LOC100131303A0A0U1RQF7 123 aa14.74□□□□□ -0.05
TPM1-208ENST00000404484 IGIPA6NJ69 53 aa14.74□□□□□ -0.05
TPM1-208ENST00000404484 TRAV12-1A0A0B4J245 112 aa14.73□□□□□ -0.05
TPM1-208ENST00000404484 NPSP0C0P6 89 aa14.73□□□□□ -0.05
TPM1-208ENST00000404484 GYPEP15421 78 aa14.73□□□□□ -0.05
TPM1-208ENST00000404484 CHCHD7Q9BUK0 85 aa14.73□□□□□ -0.05
TPM1-208ENST00000404484 DNAH7Q8WXX0 4024 aa14.73□□□□□ -0.05
TPM1-208ENST00000404484 SMAGPQ0VAQ4 97 aa14.73□□□□□ -0.05
TPM1-208ENST00000404484 C12orf74Q32Q52 190 aa14.73□□□□□ -0.05
TPM1-208ENST00000404484 PAPPA-AS1Q5QFB9 102 aa14.73□□□□□ -0.05
TPM1-208ENST00000404484 PYGO1Q9Y3Y4 419 aa14.73□□□□□ -0.05
TPM1-208ENST00000404484 F5H768 121 aa14.72□□□□□ -0.05
TPM1-208ENST00000404484 SPANXA1Q9NS26 97 aa14.72□□□□□ -0.05
TPM1-208ENST00000404484 A0A087WX48 190 aa14.71□□□□□ -0.05
TPM1-208ENST00000404484 A0A0J9YWU9 116 aa14.71□□□□□ -0.05
TPM1-208ENST00000404484 ODF1Q14990 250 aa14.71□□□□□ -0.05
TPM1-208ENST00000404484 BAALCQ8WXS3 180 aa14.71□□□□□ -0.05
TPM1-208ENST00000404484 TRAV9-2A0A087WT02 112 aa14.7□□□□□ -0.06
TPM1-208ENST00000404484 ATOH7Q8N100 152 aa14.7□□□□□ -0.06
TPM1-208ENST00000404484 TRBV25-1A0A075B6N4 114 aa14.69□□□□□ -0.06
TPM1-208ENST00000404484 HSBP1L1C9JCN9 74 aa14.69□□□□□ -0.06
TPM1-208ENST00000404484 HTN3P15516 51 aa14.69□□□□□ -0.06
TPM1-208ENST00000404484 ATP6V0E2Q8NHE4 81 aa14.69□□□□□ -0.06
TPM1-208ENST00000404484 PMCHL2Q9BQD1 86 aa14.68□□□□□ -0.06
TPM1-208ENST00000404484 TMEM243Q9BU79 118 aa14.68□□□□□ -0.06
TPM1-208ENST00000404484 TIMM21Q9BVV7 248 aa14.68□□□□□ -0.06
TPM1-208ENST00000404484 TRAV26-1A0A087WT03 109 aa14.68□□□□□ -0.06
TPM1-208ENST00000404484 PMVKQ15126 192 aa14.68□□□□□ -0.06
TPM1-208ENST00000404484 SH2D6Q7Z4S9 175 aa14.68□□□□□ -0.06
TPM1-208ENST00000404484 VSIG2Q96IQ7 327 aa14.68□□□□□ -0.06
TPM1-208ENST00000404484 PAM16Q9Y3D7 125 aa14.68□□□□□ -0.06
TPM1-208ENST00000404484 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.67□□□□□ -0.06
TPM1-208ENST00000404484 IGKV2-29A2NJV5 120 aaPredicted RBP14.67□□□□□ -0.06
TPM1-208ENST00000404484 TSTD3H0UI37 97 aa14.67□□□□□ -0.06
TPM1-208ENST00000404484 H7C423 109 aa14.67□□□□□ -0.06
TPM1-208ENST00000404484 DPM2O94777 84 aa14.67□□□□□ -0.06
TPM1-208ENST00000404484 PKIAP61925 76 aa14.67□□□□□ -0.06
TPM1-208ENST00000404484 NTM-AS1Q6ZSK4 140 aa14.67□□□□□ -0.06
TPM1-208ENST00000404484 C11orf45Q8TAV5 145 aa14.67□□□□□ -0.06
TPM1-208ENST00000404484 A0A0J9YY99 117 aa14.66□□□□□ -0.06
TPM1-208ENST00000404484 F8VRH5 84 aa14.66□□□□□ -0.06
TPM1-208ENST00000404484 PLNP26678 52 aa14.66□□□□□ -0.06
TPM1-208ENST00000404484 ZNF664Q8N3J9 261 aa14.66□□□□□ -0.06
TPM1-208ENST00000404484 UBE2D4Q9Y2X8 147 aa14.66□□□□□ -0.06
TPM1-208ENST00000404484 CHTOPQ9Y3Y2 248 aaKnown RBP14.66□□□□□ -0.06
TPM1-208ENST00000404484 IGLV4-3A0A075B6K6 122 aa14.65□□□□□ -0.06
TPM1-208ENST00000404484 TRBV6-8A0A0A6YYG3 113 aa14.65□□□□□ -0.06
TPM1-208ENST00000404484 PRSS29PA6NIE9 313 aa14.65□□□□□ -0.06
TPM1-208ENST00000404484 UBE2L6O14933 153 aa14.65□□□□□ -0.06
TPM1-208ENST00000404484 IGKCP01834 107 aa14.65□□□□□ -0.06
TPM1-208ENST00000404484 MRPL23Q16540 153 aaKnown RBP14.65□□□□□ -0.06
TPM1-208ENST00000404484 MUC7Q8TAX7 377 aa14.65□□□□□ -0.06
TPM1-208ENST00000404484 SPATA45Q537H7 98 aa14.64□□□□□ -0.07
TPM1-208ENST00000404484 VCX2Q9H322 139 aa14.64□□□□□ -0.07
TPM1-208ENST00000404484 MRPL35Q9NZE8 188 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms