RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 GTSF1Q8WW33 167 aa9.96□□□□□ -0.82
TPM1-207ENST00000403994 GFRA4Q9GZZ7 299 aa9.96□□□□□ -0.82
TPM1-207ENST00000403994 IGLV4-60A0A075B6I1 120 aa9.95□□□□□ -0.82
TPM1-207ENST00000403994 IGLV10-54A0A075B6I4 117 aa9.95□□□□□ -0.82
TPM1-207ENST00000403994 LYPD6BQ8NI32 183 aa9.95□□□□□ -0.82
TPM1-207ENST00000403994 LRP1Q07954 4544 aaKnown RBP9.95□□□□□ -0.82
TPM1-207ENST00000403994 A0A1B0GUV1 79 aa9.94□□□□□ -0.82
TPM1-207ENST00000403994 AMTP48728 403 aa9.94□□□□□ -0.82
TPM1-207ENST00000403994 KRTAP10-4P60372 401 aaPredicted RBP9.94□□□□□ -0.82
TPM1-207ENST00000403994 BLOC1S1P78537 153 aa9.94□□□□□ -0.82
TPM1-207ENST00000403994 COTL1Q14019 142 aa9.94□□□□□ -0.82
TPM1-207ENST00000403994 GATD1Q8NB37 220 aa9.94□□□□□ -0.82
TPM1-207ENST00000403994 UBE2L6O14933 153 aa9.93□□□□□ -0.82
TPM1-207ENST00000403994 FAT3Q8TDW7 4589 aa9.92□□□□□ -0.82
TPM1-207ENST00000403994 TRAV8-4A0A0B4J246 113 aa9.92□□□□□ -0.82
TPM1-207ENST00000403994 DGAT2L7PQ6IED9 249 aa9.92□□□□□ -0.82
TPM1-207ENST00000403994 FAM231DQ6ZW35 169 aa9.92□□□□□ -0.82
TPM1-207ENST00000403994 RPL39LQ96EH5 51 aaKnown RBP9.92□□□□□ -0.82
TPM1-207ENST00000403994 GATCO43716 136 aaKnown RBP9.91□□□□□ -0.82
TPM1-207ENST00000403994 CEBPGP53567 150 aa9.91□□□□□ -0.82
TPM1-207ENST00000403994 FOXA3P55318 350 aaPredicted RBP9.91□□□□□ -0.82
TPM1-207ENST00000403994 CNBPP62633 177 aaKnown RBP9.9□□□□□ -0.82
TPM1-207ENST00000403994 CT83Q5H943 113 aa9.9□□□□□ -0.82
TPM1-207ENST00000403994 SMIM15Q7Z3B0 74 aa9.9□□□□□ -0.82
TPM1-207ENST00000403994 C9orf163Q8N9P6 203 aa9.9□□□□□ -0.82
TPM1-207ENST00000403994 hDV102S1A0JD36 115 aa9.89□□□□□ -0.83
TPM1-207ENST00000403994 A8MWL6 223 aa9.89□□□□□ -0.83
TPM1-207ENST00000403994 J3QL48 77 aa9.89□□□□□ -0.83
TPM1-207ENST00000403994 CLRN3Q8NCR9 226 aa9.89□□□□□ -0.83
TPM1-207ENST00000403994 SMIM7Q9BQ49 75 aa9.89□□□□□ -0.83
TPM1-207ENST00000403994 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.89□□□□□ -0.83
TPM1-207ENST00000403994 LINC01551Q86U37 167 aa9.88□□□□□ -0.83
TPM1-207ENST00000403994 SDHAF1A6NFY7 115 aa9.87□□□□□ -0.83
TPM1-207ENST00000403994 KRTAP29-1A8MX34 341 aaPredicted RBP9.87□□□□□ -0.83
TPM1-207ENST00000403994 PANO1I0J062 215 aa9.87□□□□□ -0.83
TPM1-207ENST00000403994 NCR2O95944 276 aa9.87□□□□□ -0.83
TPM1-207ENST00000403994 APCSP02743 223 aa9.87□□□□□ -0.83
TPM1-207ENST00000403994 TEX261Q6UWH6 196 aa9.87□□□□□ -0.83
TPM1-207ENST00000403994 FAM210AQ96ND0 272 aa9.87□□□□□ -0.83
TPM1-207ENST00000403994 EIF5A2Q9GZV4 153 aaKnown RBP9.87□□□□□ -0.83
TPM1-207ENST00000403994 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.86□□□□□ -0.83
TPM1-207ENST00000403994 IGKV2-29A2NJV5 120 aaPredicted RBP9.86□□□□□ -0.83
TPM1-207ENST00000403994 NDUFS6O75380 124 aaKnown RBP9.86□□□□□ -0.83
TPM1-207ENST00000403994 SDIM1Q6ZPB5 146 aa9.86□□□□□ -0.83
TPM1-207ENST00000403994 IGKV3OR2-268A0A0C4DH90 116 aa9.85□□□□□ -0.83
TPM1-207ENST00000403994 HIGD1CA8MV81 97 aa9.85□□□□□ -0.83
TPM1-207ENST00000403994 AMMECR1LQ6DCA0 310 aa9.85□□□□□ -0.83
TPM1-207ENST00000403994 C15orf56Q8N910 161 aa9.85□□□□□ -0.83
TPM1-207ENST00000403994 TSKUQ8WUA8 353 aa9.85□□□□□ -0.83
TPM1-207ENST00000403994 BORCS7Q96B45 105 aa9.85□□□□□ -0.83
TPM1-207ENST00000403994 TRBV6-5A0A0K0K1A5 114 aa9.84□□□□□ -0.83
TPM1-207ENST00000403994 A0A1B0GUT8 65 aa9.84□□□□□ -0.83
TPM1-207ENST00000403994 GAGE12HA6NDE8 117 aa9.84□□□□□ -0.83
TPM1-207ENST00000403994 GAS8-AS1O95177 125 aa9.84□□□□□ -0.83
TPM1-207ENST00000403994 SLPIP03973 132 aa9.84□□□□□ -0.83
TPM1-207ENST00000403994 FGF6P10767 208 aa9.84□□□□□ -0.83
TPM1-207ENST00000403994 RPL37AP61513 92 aaKnown RBP9.84□□□□□ -0.83
TPM1-207ENST00000403994 CIRBPQ14011 172 aaKnown RBP9.84□□□□□ -0.83
TPM1-207ENST00000403994 AP5S1Q9NUS5 200 aa9.84□□□□□ -0.83
TPM1-207ENST00000403994 IGHV3-64A0A075B6Q5 118 aa9.83□□□□□ -0.84
TPM1-207ENST00000403994 ZNF727A8MUV8 499 aa9.83□□□□□ -0.84
TPM1-207ENST00000403994 H7C423 109 aa9.83□□□□□ -0.84
TPM1-207ENST00000403994 SRP19P09132 144 aaKnown RBP9.83□□□□□ -0.84
TPM1-207ENST00000403994 RNASEKQ6P5S7 137 aaKnown RBP9.83□□□□□ -0.84
TPM1-207ENST00000403994 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.82□□□□□ -0.84
TPM1-207ENST00000403994 A0A1B0GVG6 124 aa9.82□□□□□ -0.84
TPM1-207ENST00000403994 FAM231BA6NCW3 169 aa9.82□□□□□ -0.84
TPM1-207ENST00000403994 I3L3M4 83 aa9.82□□□□□ -0.84
TPM1-207ENST00000403994 TSHBP01222 138 aa9.82□□□□□ -0.84
TPM1-207ENST00000403994 CHCHD10Q8WYQ3 142 aaPredicted RBP9.82□□□□□ -0.84
TPM1-207ENST00000403994 RNF185Q96GF1 192 aa9.82□□□□□ -0.84
TPM1-207ENST00000403994 TMEM191AQ9H0A3 160 aa9.82□□□□□ -0.84
TPM1-207ENST00000403994 OSTCQ9NRP0 149 aa9.82□□□□□ -0.84
TPM1-207ENST00000403994 TMEM242Q9NWH2 141 aa9.82□□□□□ -0.84
TPM1-207ENST00000403994 ZNF25P17030 456 aaPredicted RBP9.81□□□□□ -0.84
TPM1-207ENST00000403994 RPS10P46783 165 aaKnown RBP9.81□□□□□ -0.84
TPM1-207ENST00000403994 ST20Q9HBF5 79 aa9.81□□□□□ -0.84
TPM1-207ENST00000403994 V9GYV3 84 aa9.81□□□□□ -0.84
TPM1-207ENST00000403994 HMCN2Q8NDA2 5059 aa9.81□□□□□ -0.84
TPM1-207ENST00000403994 CHTF8P0CG12 524 aa9.8□□□□□ -0.84
TPM1-207ENST00000403994 PMCHP20382 165 aa9.8□□□□□ -0.84
TPM1-207ENST00000403994 HNRNPA3P51991 378 aaKnown RBP9.8□□□□□ -0.84
TPM1-207ENST00000403994 HIGD2BQ4VC39 106 aa9.8□□□□□ -0.84
TPM1-207ENST00000403994 AMN1Q8IY45 258 aa9.8□□□□□ -0.84
TPM1-207ENST00000403994 SPACA4Q8TDM5 124 aa9.8□□□□□ -0.84
TPM1-207ENST00000403994 MRAP2Q96G30 205 aa9.8□□□□□ -0.84
TPM1-207ENST00000403994 ESDP10768 282 aa9.79□□□□□ -0.84
TPM1-207ENST00000403994 FOXI1Q12951 378 aa9.79□□□□□ -0.84
TPM1-207ENST00000403994 CFAP161Q6P656 301 aa9.79□□□□□ -0.84
TPM1-207ENST00000403994 ISOC2Q96AB3 205 aa9.79□□□□□ -0.84
TPM1-207ENST00000403994 GVQW2A0A096LPI5 108 aaPredicted RBP9.78□□□□□ -0.84
TPM1-207ENST00000403994 TRBV27A0A0K0K1C4 114 aa9.78□□□□□ -0.84
TPM1-207ENST00000403994 RAB4AP20338 218 aa9.78□□□□□ -0.84
TPM1-207ENST00000403994 POLR2KP53803 58 aaKnown RBP9.78□□□□□ -0.84
TPM1-207ENST00000403994 NUP35Q8NFH5 326 aa9.78□□□□□ -0.84
TPM1-207ENST00000403994 OR5A1Q8NGJ0 315 aa9.78□□□□□ -0.84
TPM1-207ENST00000403994 SMKR1H3BMG3 65 aa9.77□□□□□ -0.85
TPM1-207ENST00000403994 OXTP01178 125 aa9.77□□□□□ -0.85
TPM1-207ENST00000403994 XCL1P47992 114 aa9.77□□□□□ -0.85
TPM1-207ENST00000403994 RPL23P62829 140 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms