RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 Q9UF83 564 aa12.93□□□□□ -0.34
CHTOP-205ENST00000403433 FABP2P12104 132 aa12.92□□□□□ -0.34
CHTOP-205ENST00000403433 TMEM263Q8WUH6 116 aaKnown RBP12.92□□□□□ -0.34
CHTOP-205ENST00000403433 PHLDA1Q8WV24 401 aaPredicted RBP12.92□□□□□ -0.34
CHTOP-205ENST00000403433 PLEKHB2Q96CS7 222 aa12.92□□□□□ -0.34
CHTOP-205ENST00000403433 FAM110AQ9BQ89 295 aa12.92□□□□□ -0.34
CHTOP-205ENST00000403433 LGALS3P17931 250 aaKnown RBP12.9□□□□□ -0.34
CHTOP-205ENST00000403433 CRYBA4P53673 196 aa12.9□□□□□ -0.34
CHTOP-205ENST00000403433 COTL1Q14019 142 aa12.9□□□□□ -0.34
CHTOP-205ENST00000403433 C12orf74Q32Q52 190 aa12.9□□□□□ -0.34
CHTOP-205ENST00000403433 CHCHD7Q9BUK0 85 aa12.9□□□□□ -0.34
CHTOP-205ENST00000403433 SPCS1Q9Y6A9 102 aa12.9□□□□□ -0.34
CHTOP-205ENST00000403433 HELZ2Q9BYK8 2649 aaKnown RBP12.9□□□□□ -0.34
CHTOP-205ENST00000403433 TMEM223A0PJW6 202 aa12.9□□□□□ -0.35
CHTOP-205ENST00000403433 ZNF22P17026 224 aaPredicted RBP12.9□□□□□ -0.35
CHTOP-205ENST00000403433 TSPEAR-AS2P59090 65 aa12.9□□□□□ -0.35
CHTOP-205ENST00000403433 AMELXQ99217 191 aa12.9□□□□□ -0.35
CHTOP-205ENST00000403433 WFDC10AQ9H1F0 79 aa12.9□□□□□ -0.35
CHTOP-205ENST00000403433 SPANXA1Q9NS26 97 aa12.9□□□□□ -0.35
CHTOP-205ENST00000403433 ITPR2Q14571 2701 aa12.89□□□□□ -0.35
CHTOP-205ENST00000403433 UNC79Q9P2D8 2635 aa12.89□□□□□ -0.35
CHTOP-205ENST00000403433 NF1P21359 2839 aa12.89□□□□□ -0.35
CHTOP-205ENST00000403433 A0A0J9YXV3 536 aa12.89□□□□□ -0.35
CHTOP-205ENST00000403433 J3QQQ9 107 aa12.89□□□□□ -0.35
CHTOP-205ENST00000403433 SRSF9Q13242 221 aaKnown RBP eCLIP12.89□□□□□ -0.351e-7■□□□□ 8.6
CHTOP-205ENST00000403433 CUBNO60494 3623 aa12.89□□□□□ -0.35
CHTOP-205ENST00000403433 IGHV3-38A0A0C4DH36 116 aa12.88□□□□□ -0.35
CHTOP-205ENST00000403433 LY6G6DO95868 133 aa12.88□□□□□ -0.35
CHTOP-205ENST00000403433 RPL35AP18077 110 aaKnown RBP12.88□□□□□ -0.35
CHTOP-205ENST00000403433 NDUFA11Q86Y39 141 aa12.88□□□□□ -0.35
CHTOP-205ENST00000403433 OR5A1Q8NGJ0 315 aa12.88□□□□□ -0.35
CHTOP-205ENST00000403433 TMEM238LA0A1B0GVL6 79 aa12.88□□□□□ -0.35
CHTOP-205ENST00000403433 GAGE12BA1L429 117 aa12.88□□□□□ -0.35
CHTOP-205ENST00000403433 A6NJY4 79 aa12.88□□□□□ -0.35
CHTOP-205ENST00000403433 LEPROTO15243 131 aa12.88□□□□□ -0.35
CHTOP-205ENST00000403433 CEMP1Q6PRD7 247 aaPredicted RBP12.88□□□□□ -0.35
CHTOP-205ENST00000403433 C19orf73Q9NVV2 129 aa12.88□□□□□ -0.35
CHTOP-205ENST00000403433 UBE2D4Q9Y2X8 147 aa12.88□□□□□ -0.35
CHTOP-205ENST00000403433 ANK3Q12955 4377 aaKnown RBP12.87□□□□□ -0.35
CHTOP-205ENST00000403433 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.87□□□□□ -0.35
CHTOP-205ENST00000403433 A0A0J9YY99 117 aa12.87□□□□□ -0.35
CHTOP-205ENST00000403433 IGKV2-29A2NJV5 120 aaPredicted RBP12.87□□□□□ -0.35
CHTOP-205ENST00000403433 GIG44P09565 113 aaPredicted RBP12.87□□□□□ -0.35
CHTOP-205ENST00000403433 Q6ZTI0 123 aa12.87□□□□□ -0.35
CHTOP-205ENST00000403433 C1QTNF4Q9BXJ3 329 aa12.87□□□□□ -0.35
CHTOP-205ENST00000403433 TRAV4A0A0B4J268 109 aa12.86□□□□□ -0.35
CHTOP-205ENST00000403433 A0A1B0GWB2 263 aa12.86□□□□□ -0.35
CHTOP-205ENST00000403433 FAM104AQ969W3 186 aa12.86□□□□□ -0.35
CHTOP-205ENST00000403433 C16orf74Q96GX8 76 aa12.86□□□□□ -0.35
CHTOP-205ENST00000403433 ZNF479Q96JC4 524 aa12.86□□□□□ -0.35
CHTOP-205ENST00000403433 PF4P02776 101 aa12.86□□□□□ -0.35
CHTOP-205ENST00000403433 MRPS36P82909 103 aaKnown RBP12.86□□□□□ -0.35
CHTOP-205ENST00000403433 MTORP42345 2549 aa12.85□□□□□ -0.35
CHTOP-205ENST00000403433 IGLL5B9A064 214 aa12.85□□□□□ -0.35
CHTOP-205ENST00000403433 K7EQD1 137 aa12.85□□□□□ -0.35
CHTOP-205ENST00000403433 NOP10Q9NPE3 64 aaKnown RBP12.85□□□□□ -0.35
CHTOP-205ENST00000403433 DAZ2Q13117 558 aaKnown RBP12.84□□□□□ -0.35
CHTOP-205ENST00000403433 RNASE13Q5GAN3 156 aaKnown RBP12.84□□□□□ -0.35
CHTOP-205ENST00000403433 SPANXB1Q9NS25 103 aaPredicted RBP12.84□□□□□ -0.35
CHTOP-205ENST00000403433 IGHV3-64A0A075B6Q5 118 aa12.84□□□□□ -0.35
CHTOP-205ENST00000403433 TRBV10-1A0A0K0K1A3 114 aa12.84□□□□□ -0.35
CHTOP-205ENST00000403433 RPL36AP83881 106 aaKnown RBP12.84□□□□□ -0.35
CHTOP-205ENST00000403433 RPL36ALQ969Q0 106 aaKnown RBP12.84□□□□□ -0.35
CHTOP-205ENST00000403433 KRTAP10-3P60369 221 aa12.83□□□□□ -0.36
CHTOP-205ENST00000403433 Q6ZUT4 128 aa12.83□□□□□ -0.36
CHTOP-205ENST00000403433 SLC25A29Q8N8R3 303 aa12.82□□□□□ -0.36
CHTOP-205ENST00000403433 HIVEP2P31629 2446 aa12.82□□□□□ -0.36
CHTOP-205ENST00000403433 FASNP49327 2511 aaKnown RBP12.82□□□□□ -0.36
CHTOP-205ENST00000403433 RRN3P1Q2M238 152 aa12.82□□□□□ -0.36
CHTOP-205ENST00000403433 TIMM21Q9BVV7 248 aa12.82□□□□□ -0.36
CHTOP-205ENST00000403433 TINCRA0A1B0GVN0 87 aa12.81□□□□□ -0.36
CHTOP-205ENST00000403433 PLAC8L1A1L4L8 177 aa12.8□□□□□ -0.36
CHTOP-205ENST00000403433 LINC00482Q8N8I6 264 aa12.8□□□□□ -0.36
CHTOP-205ENST00000403433 CSNK1G2-AS1Q8NCQ2 148 aa12.8□□□□□ -0.36
CHTOP-205ENST00000403433 FOSL1P15407 271 aa12.8□□□□□ -0.36
CHTOP-205ENST00000403433 UBE2D1P51668 147 aa12.8□□□□□ -0.36
CHTOP-205ENST00000403433 DGAT2L7PQ6IED9 249 aa12.8□□□□□ -0.36
CHTOP-205ENST00000403433 DAZ4Q86SG3 579 aaKnown RBP12.8□□□□□ -0.36
CHTOP-205ENST00000403433 DAZ3Q9NR90 486 aaKnown RBP12.8□□□□□ -0.36
CHTOP-205ENST00000403433 SETD2Q9BYW2 2564 aaPredicted RBP12.79□□□□□ -0.36
CHTOP-205ENST00000403433 TRGV2A0A075B6R0 118 aa12.79□□□□□ -0.36
CHTOP-205ENST00000403433 GAGE7O76087 117 aa12.79□□□□□ -0.36
CHTOP-205ENST00000403433 GAGE12FP0CL80 117 aa12.79□□□□□ -0.36
CHTOP-205ENST00000403433 GAGE12GP0CL81 117 aa12.79□□□□□ -0.36
CHTOP-205ENST00000403433 GAGE12IP0CL82 117 aa12.79□□□□□ -0.36
CHTOP-205ENST00000403433 OCIAD2Q56VL3 154 aa12.79□□□□□ -0.36
CHTOP-205ENST00000403433 IGHV3-30P01768 117 aa12.78□□□□□ -0.36
CHTOP-205ENST00000403433 IGHV3-30-3P0DP02 117 aa12.78□□□□□ -0.36
CHTOP-205ENST00000403433 IGHV3-30-5P0DP03 117 aa12.78□□□□□ -0.36
CHTOP-205ENST00000403433 GEMIN7Q9H840 131 aaKnown RBP12.78□□□□□ -0.36
CHTOP-205ENST00000403433 GAGE12JA6NER3 117 aa12.77□□□□□ -0.37
CHTOP-205ENST00000403433 INAFM1C9JVW0 142 aa12.77□□□□□ -0.37
CHTOP-205ENST00000403433 UBE2D3P61077 147 aa12.77□□□□□ -0.37
CHTOP-205ENST00000403433 UBE2D2P62837 147 aa12.77□□□□□ -0.37
CHTOP-205ENST00000403433 GAGE4Q13068 117 aa12.77□□□□□ -0.37
CHTOP-205ENST00000403433 GAGE5Q13069 117 aa12.77□□□□□ -0.37
CHTOP-205ENST00000403433 GAGE13Q4V321 117 aa12.77□□□□□ -0.37
CHTOP-205ENST00000403433 OVOL2Q9BRP0 275 aa12.77□□□□□ -0.37
CHTOP-205ENST00000403433 PGPEP1Q9NXJ5 209 aa12.77□□□□□ -0.37
CHTOP-205ENST00000403433 IGHV1-58A0A0C4DH39 117 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms