RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 NBPF19A0A087WUL8 3843 aa10.45□□□□□ -0.74
ATG3-202ENST00000402314 MTORP42345 2549 aa10.45□□□□□ -0.74
ATG3-202ENST00000402314 IGHV3-73A0A0B4J1V6 119 aa10.45□□□□□ -0.74
ATG3-202ENST00000402314 SYNJ2BPP57105 145 aa10.45□□□□□ -0.74
ATG3-202ENST00000402314 FAM19A4Q96LR4 140 aa10.45□□□□□ -0.74
ATG3-202ENST00000402314 TRAV8-3A0A0A6YYJ7 113 aa10.44□□□□□ -0.74
ATG3-202ENST00000402314 TRAV8-4A0A0B4J246 113 aa10.44□□□□□ -0.74
ATG3-202ENST00000402314 KRTAP10-9P60411 292 aa10.44□□□□□ -0.74
ATG3-202ENST00000402314 ZNF56Q15929 161 aa10.44□□□□□ -0.74
ATG3-202ENST00000402314 DAND5Q8N907 189 aa10.44□□□□□ -0.74
ATG3-202ENST00000402314 APCP25054 2843 aa10.44□□□□□ -0.74
ATG3-202ENST00000402314 TRBV7-9A0A0J9YWB2 115 aa10.44□□□□□ -0.74
ATG3-202ENST00000402314 A0A0U1RRA0 63 aa10.44□□□□□ -0.74
ATG3-202ENST00000402314 PSMB8P28062 276 aa10.44□□□□□ -0.74
ATG3-202ENST00000402314 LINC01620Q4KN68 170 aa10.44□□□□□ -0.74
ATG3-202ENST00000402314 AMELXQ99217 191 aa10.44□□□□□ -0.74
ATG3-202ENST00000402314 CHCHD5Q9BSY4 110 aa10.44□□□□□ -0.74
ATG3-202ENST00000402314 H3BUA1 57 aa10.44□□□□□ -0.74
ATG3-202ENST00000402314 JMJD1CQ15652 2540 aa10.43□□□□□ -0.74
ATG3-202ENST00000402314 TRIAP1O43715 76 aa10.43□□□□□ -0.74
ATG3-202ENST00000402314 TMEM263Q8WUH6 116 aaKnown RBP10.43□□□□□ -0.74
ATG3-202ENST00000402314 BBC3Q96PG8 261 aaPredicted RBP10.43□□□□□ -0.74
ATG3-202ENST00000402314 DEFB136Q30KP8 78 aa10.43□□□□□ -0.74
ATG3-202ENST00000402314 SBSPONQ8IVN8 264 aa10.43□□□□□ -0.74
ATG3-202ENST00000402314 ODF3Q96PU9 254 aa10.43□□□□□ -0.74
ATG3-202ENST00000402314 MDFICQ9P1T7 246 aa10.43□□□□□ -0.74
ATG3-202ENST00000402314 C2orf82Q6UX34 121 aa10.42□□□□□ -0.74
ATG3-202ENST00000402314 C18orf65Q6ZTR6 163 aa10.42□□□□□ -0.74
ATG3-202ENST00000402314 UBR5O95071 2799 aaPredicted RBP10.42□□□□□ -0.74
ATG3-202ENST00000402314 PRM2P04554 102 aa10.42□□□□□ -0.74
ATG3-202ENST00000402314 RPL32P62910 135 aaKnown RBP10.42□□□□□ -0.74
ATG3-202ENST00000402314 SPINK13Q1W4C9 94 aa10.42□□□□□ -0.74
ATG3-202ENST00000402314 LINC00315P59091 139 aa10.41□□□□□ -0.74
ATG3-202ENST00000402314 MEIG1Q5JSS6 88 aa10.41□□□□□ -0.74
ATG3-202ENST00000402314 ITPR3Q14573 2671 aa10.41□□□□□ -0.74
ATG3-202ENST00000402314 IGHV4OR15-8A0A075B7B6 117 aa10.4□□□□□ -0.74
ATG3-202ENST00000402314 A0A087WW49 117 aa10.4□□□□□ -0.74
ATG3-202ENST00000402314 KLLNB2CW77 178 aa10.4□□□□□ -0.74
ATG3-202ENST00000402314 VCYO14598 125 aa10.4□□□□□ -0.74
ATG3-202ENST00000402314 ZNF876PQ49A33 203 aa10.4□□□□□ -0.74
ATG3-202ENST00000402314 LINC01356Q8N9X3 169 aa10.4□□□□□ -0.74
ATG3-202ENST00000402314 P0DMU3 169 aa10.4□□□□□ -0.74
ATG3-202ENST00000402314 FAM231AP0DMU4 169 aa10.4□□□□□ -0.74
ATG3-202ENST00000402314 FAM231CP0DMU5 169 aa10.4□□□□□ -0.74
ATG3-202ENST00000402314 POLR2KP53803 58 aaKnown RBP10.4□□□□□ -0.74
ATG3-202ENST00000402314 FLNAP21333 2647 aaKnown RBP10.4□□□□□ -0.75
ATG3-202ENST00000402314 ATXN8Q156A1 80 aa10.39□□□□□ -0.75
ATG3-202ENST00000402314 KIF25-AS1Q9Y6Z4 181 aa10.39□□□□□ -0.75
ATG3-202ENST00000402314 H3BMM0 161 aa10.39□□□□□ -0.75
ATG3-202ENST00000402314 ADAMTSL4-AS1Q5T5F5 129 aa10.39□□□□□ -0.75
ATG3-202ENST00000402314 APRG1Q8IVJ8 170 aa10.39□□□□□ -0.75
ATG3-202ENST00000402314 UBE2WQ96B02 151 aa10.39□□□□□ -0.75
ATG3-202ENST00000402314 A0A096LNT2 108 aa10.39□□□□□ -0.75
ATG3-202ENST00000402314 BRI3O95415 125 aa10.39□□□□□ -0.75
ATG3-202ENST00000402314 ZNF22P17026 224 aaPredicted RBP10.39□□□□□ -0.75
ATG3-202ENST00000402314 ID1P41134 155 aa10.39□□□□□ -0.75
ATG3-202ENST00000402314 PAPPA-AS1Q5QFB9 102 aa10.38□□□□□ -0.75
ATG3-202ENST00000402314 CFAP161Q6P656 301 aa10.37□□□□□ -0.75
ATG3-202ENST00000402314 A0A0J9YXY3 114 aa10.37□□□□□ -0.75
ATG3-202ENST00000402314 K7EMT4 169 aa10.37□□□□□ -0.75
ATG3-202ENST00000402314 ZNF625Q96I27 306 aaPredicted RBP10.37□□□□□ -0.75
ATG3-202ENST00000402314 TMEM223A0PJW6 202 aa10.36□□□□□ -0.75
ATG3-202ENST00000402314 H7C423 109 aa10.36□□□□□ -0.75
ATG3-202ENST00000402314 HOXD3P31249 432 aaPredicted RBP10.36□□□□□ -0.75
ATG3-202ENST00000402314 PROK1P58294 105 aa10.36□□□□□ -0.75
ATG3-202ENST00000402314 Q9UF83 564 aa10.36□□□□□ -0.75
ATG3-202ENST00000402314 A0A0J9YX75 114 aa10.36□□□□□ -0.75
ATG3-202ENST00000402314 KNCNA6PVL3 124 aa10.36□□□□□ -0.75
ATG3-202ENST00000402314 SLURP1P55000 103 aa10.36□□□□□ -0.75
ATG3-202ENST00000402314 IGHV3-30-3P0DP02 117 aa10.35□□□□□ -0.75
ATG3-202ENST00000402314 K7EQG2 157 aa10.35□□□□□ -0.75
ATG3-202ENST00000402314 LEPROTO15243 131 aa10.35□□□□□ -0.75
ATG3-202ENST00000402314 TMEM141Q96I45 108 aa10.35□□□□□ -0.75
ATG3-202ENST00000402314 IGHV3-16A0A0C4DH30 117 aa10.34□□□□□ -0.75
ATG3-202ENST00000402314 ZNF702PQ9H963 129 aa10.34□□□□□ -0.75
ATG3-202ENST00000402314 VPREB3Q9UKI3 123 aa10.34□□□□□ -0.75
ATG3-202ENST00000402314 TRBV10-2A0A0K0K1G8 114 aa10.34□□□□□ -0.75
ATG3-202ENST00000402314 SNRPD3P62318 126 aaKnown RBP10.34□□□□□ -0.75
ATG3-202ENST00000402314 KHDC1LQ5JSQ8 128 aa10.34□□□□□ -0.75
ATG3-202ENST00000402314 TIMM17AQ99595 171 aa10.34□□□□□ -0.75
ATG3-202ENST00000402314 ICOSQ9Y6W8 199 aa10.34□□□□□ -0.75
ATG3-202ENST00000402314 LGALS9O00182 355 aa10.33□□□□□ -0.75
ATG3-202ENST00000402314 PPP1R17O96001 155 aa10.33□□□□□ -0.75
ATG3-202ENST00000402314 AKAP9Q99996 3911 aa10.33□□□□□ -0.76
ATG3-202ENST00000402314 RS1O15537 224 aa10.33□□□□□ -0.76
ATG3-202ENST00000402314 RBMY1A1P0DJD3 496 aaKnown RBP10.33□□□□□ -0.76
ATG3-202ENST00000402314 RBMY1CP0DJD4 496 aa10.33□□□□□ -0.76
ATG3-202ENST00000402314 RBMY1FQ15415 496 aaKnown RBP10.33□□□□□ -0.76
ATG3-202ENST00000402314 TIMM21Q9BVV7 248 aa10.33□□□□□ -0.76
ATG3-202ENST00000402314 NXPH4O95158 308 aa10.33□□□□□ -0.76
ATG3-202ENST00000402314 MED14OSP0DP75 135 aa10.33□□□□□ -0.76
ATG3-202ENST00000402314 CD28P10747 220 aa10.33□□□□□ -0.76
ATG3-202ENST00000402314 IGHV4-31P0DP07 118 aa10.32□□□□□ -0.76
ATG3-202ENST00000402314 C11orf44Q8N8P7 122 aa10.32□□□□□ -0.76
ATG3-202ENST00000402314 CR1P17927 2039 aa10.32□□□□□ -0.76
ATG3-202ENST00000402314 M0R2P5 195 aa10.32□□□□□ -0.76
ATG3-202ENST00000402314 DSCR9P59020 149 aa10.32□□□□□ -0.76
ATG3-202ENST00000402314 IGLV4-3A0A075B6K6 122 aa10.31□□□□□ -0.76
ATG3-202ENST00000402314 A0A0B4J2C4 111 aa10.31□□□□□ -0.76
ATG3-202ENST00000402314 ITPR2Q14571 2701 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms