RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 A0A1B0GUV1 79 aa10.33□□□□□ -0.76
ATG4B-203ENST00000400772 CT83Q5H943 113 aa10.33□□□□□ -0.76
ATG4B-203ENST00000400772 RPL39LQ96EH5 51 aaKnown RBP10.33□□□□□ -0.76
ATG4B-203ENST00000400772 SMIM7Q9BQ49 75 aa10.33□□□□□ -0.76
ATG4B-203ENST00000400772 GFRA4Q9GZZ7 299 aa10.33□□□□□ -0.76
ATG4B-203ENST00000400772 USP17L23D6RBM5 183 aa10.32□□□□□ -0.76
ATG4B-203ENST00000400772 REG3AQ06141 175 aa10.32□□□□□ -0.76
ATG4B-203ENST00000400772 ZNF727A8MUV8 499 aa10.31□□□□□ -0.76
ATG4B-203ENST00000400772 FAM229AH3BQW9 127 aa10.31□□□□□ -0.76
ATG4B-203ENST00000400772 HLA-DQA1P01909 254 aa10.31□□□□□ -0.76
ATG4B-203ENST00000400772 COTL1Q14019 142 aa10.31□□□□□ -0.76
ATG4B-203ENST00000400772 C14orf177Q52M58 125 aa10.31□□□□□ -0.76
ATG4B-203ENST00000400772 OSTCQ9NRP0 149 aa10.31□□□□□ -0.76
ATG4B-203ENST00000400772 HERC1Q15751 4861 aa10.3□□□□□ -0.76
ATG4B-203ENST00000400772 C9JQL5 133 aa10.3□□□□□ -0.76
ATG4B-203ENST00000400772 PRSS1P07477 247 aa10.3□□□□□ -0.76
ATG4B-203ENST00000400772 SMIM15Q7Z3B0 74 aa10.3□□□□□ -0.76
ATG4B-203ENST00000400772 TSKUQ8WUA8 353 aa10.3□□□□□ -0.76
ATG4B-203ENST00000400772 MYCBP2O75592 4640 aa10.3□□□□□ -0.76
ATG4B-203ENST00000400772 IGLV10-54A0A075B6I4 117 aa10.29□□□□□ -0.76
ATG4B-203ENST00000400772 HIGD1CA8MV81 97 aa10.29□□□□□ -0.76
ATG4B-203ENST00000400772 GAS8-AS1O95177 125 aa10.29□□□□□ -0.76
ATG4B-203ENST00000400772 AMTP48728 403 aa10.29□□□□□ -0.76
ATG4B-203ENST00000400772 SCXQ7RTU7 201 aa10.28□□□□□ -0.76
ATG4B-203ENST00000400772 V9GYV3 84 aa10.28□□□□□ -0.76
ATG4B-203ENST00000400772 TRAV8-4A0A0B4J246 113 aa10.27□□□□□ -0.77
ATG4B-203ENST00000400772 A0A1B0GUT8 65 aa10.27□□□□□ -0.77
ATG4B-203ENST00000400772 FAM231BA6NCW3 169 aa10.27□□□□□ -0.77
ATG4B-203ENST00000400772 UBE2L6O14933 153 aa10.27□□□□□ -0.77
ATG4B-203ENST00000400772 SRSF3P84103 164 aaKnown RBP10.27□□□□□ -0.77
ATG4B-203ENST00000400772 TEX261Q6UWH6 196 aa10.27□□□□□ -0.77
ATG4B-203ENST00000400772 ISOC2Q96AB3 205 aa10.27□□□□□ -0.77
ATG4B-203ENST00000400772 RNF185Q96GF1 192 aa10.27□□□□□ -0.77
ATG4B-203ENST00000400772 TRBV6-5A0A0K0K1A5 114 aa10.26□□□□□ -0.77
ATG4B-203ENST00000400772 SDHAF1A6NFY7 115 aa10.26□□□□□ -0.77
ATG4B-203ENST00000400772 NCR2O95944 276 aa10.26□□□□□ -0.77
ATG4B-203ENST00000400772 RPL23P62829 140 aaKnown RBP10.26□□□□□ -0.77
ATG4B-203ENST00000400772 TMEM241Q24JQ0 296 aa10.26□□□□□ -0.77
ATG4B-203ENST00000400772 LINC00528Q8N1L1 170 aa10.26□□□□□ -0.77
ATG4B-203ENST00000400772 CHAC1Q9BUX1 264 aa10.26□□□□□ -0.77
ATG4B-203ENST00000400772 TMEM191AQ9H0A3 160 aa10.26□□□□□ -0.77
ATG4B-203ENST00000400772 RAB4AP20338 218 aa10.25□□□□□ -0.77
ATG4B-203ENST00000400772 FAM74A3Q4VXF1 159 aa10.25□□□□□ -0.77
ATG4B-203ENST00000400772 DGAT2L7PQ6IED9 249 aa10.25□□□□□ -0.77
ATG4B-203ENST00000400772 NUP35Q8NFH5 326 aa10.25□□□□□ -0.77
ATG4B-203ENST00000400772 CIRBP-AS1Q8TBR5 109 aa10.25□□□□□ -0.77
ATG4B-203ENST00000400772 BORCS7Q96B45 105 aa10.25□□□□□ -0.77
ATG4B-203ENST00000400772 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.24□□□□□ -0.77
ATG4B-203ENST00000400772 IGKV2-29A2NJV5 120 aaPredicted RBP10.24□□□□□ -0.77
ATG4B-203ENST00000400772 RPS10P46783 165 aaKnown RBP10.24□□□□□ -0.77
ATG4B-203ENST00000400772 C9orf163Q8N9P6 203 aa10.24□□□□□ -0.77
ATG4B-203ENST00000400772 FLG2Q5D862 2391 aaPredicted RBP10.23□□□□□ -0.77
ATG4B-203ENST00000400772 H7C423 109 aa10.23□□□□□ -0.77
ATG4B-203ENST00000400772 I3L3M4 83 aa10.23□□□□□ -0.77
ATG4B-203ENST00000400772 APCSP02743 223 aa10.23□□□□□ -0.77
ATG4B-203ENST00000400772 AMN1Q8IY45 258 aa10.23□□□□□ -0.77
ATG4B-203ENST00000400772 CLRN3Q8NCR9 226 aa10.23□□□□□ -0.77
ATG4B-203ENST00000400772 SRRM2Q9UQ35 2752 aaKnown RBP10.22□□□□□ -0.77
ATG4B-203ENST00000400772 PMCHP20382 165 aa10.22□□□□□ -0.77
ATG4B-203ENST00000400772 POLR2KP53803 58 aaKnown RBP10.22□□□□□ -0.77
ATG4B-203ENST00000400772 PEA15Q15121 130 aa10.22□□□□□ -0.77
ATG4B-203ENST00000400772 ST20Q9HBF5 79 aa10.22□□□□□ -0.77
ATG4B-203ENST00000400772 NAT8Q9UHE5 227 aa10.22□□□□□ -0.77
ATG4B-203ENST00000400772 IGKV3OR2-268A0A0C4DH90 116 aa10.21□□□□□ -0.77
ATG4B-203ENST00000400772 TSHBP01222 138 aa10.21□□□□□ -0.77
ATG4B-203ENST00000400772 SLPIP03973 132 aa10.21□□□□□ -0.77
ATG4B-203ENST00000400772 PLA2G1BP04054 148 aaKnown RBP10.21□□□□□ -0.77
ATG4B-203ENST00000400772 FGF6P10767 208 aa10.21□□□□□ -0.77
ATG4B-203ENST00000400772 ESDP10768 282 aa10.21□□□□□ -0.77
ATG4B-203ENST00000400772 KRTAP10-4P60372 401 aaPredicted RBP10.21□□□□□ -0.77
ATG4B-203ENST00000400772 ADIRFQ15847 76 aa10.21□□□□□ -0.77
ATG4B-203ENST00000400772 AMMECR1LQ6DCA0 310 aa10.21□□□□□ -0.77
ATG4B-203ENST00000400772 MRAP2Q96G30 205 aa10.21□□□□□ -0.77
ATG4B-203ENST00000400772 hDV102S1A0JD36 115 aa10.2□□□□□ -0.78
ATG4B-203ENST00000400772 GAGE12HA6NDE8 117 aa10.2□□□□□ -0.78
ATG4B-203ENST00000400772 SMKR1H3BMG3 65 aa10.2□□□□□ -0.78
ATG4B-203ENST00000400772 CNBPP62633 177 aaKnown RBP10.2□□□□□ -0.78
ATG4B-203ENST00000400772 RIGQ13278 110 aa10.2□□□□□ -0.78
ATG4B-203ENST00000400772 RNASEKQ6P5S7 137 aaKnown RBP10.2□□□□□ -0.78
ATG4B-203ENST00000400772 SDIM1Q6ZPB5 146 aa10.2□□□□□ -0.78
ATG4B-203ENST00000400772 SMDT1Q9H4I9 107 aa10.2□□□□□ -0.78
ATG4B-203ENST00000400772 TMEM242Q9NWH2 141 aa10.2□□□□□ -0.78
ATG4B-203ENST00000400772 NAT8BQ9UHF3 227 aa10.2□□□□□ -0.78
ATG4B-203ENST00000400772 TRBV27A0A0K0K1C4 114 aa10.19□□□□□ -0.78
ATG4B-203ENST00000400772 SMIM27A0A1W2PRY6 76 aa10.19□□□□□ -0.78
ATG4B-203ENST00000400772 PANO1I0J062 215 aa10.19□□□□□ -0.78
ATG4B-203ENST00000400772 C15orf56Q8N910 161 aa10.18□□□□□ -0.78
ATG4B-203ENST00000400772 NRACQ8N912 160 aa10.18□□□□□ -0.78
ATG4B-203ENST00000400772 CHCHD10Q8WYQ3 142 aaPredicted RBP10.18□□□□□ -0.78
ATG4B-203ENST00000400772 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.18□□□□□ -0.78
ATG4B-203ENST00000400772 ZNF25P17030 456 aaPredicted RBP10.17□□□□□ -0.78
ATG4B-203ENST00000400772 FAM104BQ5XKR9 115 aa10.16□□□□□ -0.78
ATG4B-203ENST00000400772 OR5A1Q8NGJ0 315 aa10.16□□□□□ -0.78
ATG4B-203ENST00000400772 LRP1Q07954 4544 aaKnown RBP10.16□□□□□ -0.78
ATG4B-203ENST00000400772 FAT3Q8TDW7 4589 aa10.15□□□□□ -0.78
ATG4B-203ENST00000400772 VCYO14598 125 aa10.15□□□□□ -0.78
ATG4B-203ENST00000400772 FOXI1Q12951 378 aa10.15□□□□□ -0.78
ATG4B-203ENST00000400772 MRPL51Q4U2R6 128 aaKnown RBP10.15□□□□□ -0.78
ATG4B-203ENST00000400772 PKHD1L1Q86WI1 4243 aa10.14□□□□□ -0.79
ATG4B-203ENST00000400772 LINC00959A0A1B0GUT2 108 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms