RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 H7C423 109 aa13.29□□□□□ -0.28
KDM1A-202ENST00000400181 SNRPD3P62318 126 aaKnown RBP13.29□□□□□ -0.28
KDM1A-202ENST00000400181 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.28□□□□□ -0.28
KDM1A-202ENST00000400181 IGKV2-29A2NJV5 120 aaPredicted RBP13.28□□□□□ -0.28
KDM1A-202ENST00000400181 C3orf56Q8N813 242 aa13.28□□□□□ -0.28
KDM1A-202ENST00000400181 LITAFQ99732 161 aa13.28□□□□□ -0.28
KDM1A-202ENST00000400181 TRBV30A0A0K0K1B3 111 aa13.28□□□□□ -0.28
KDM1A-202ENST00000400181 CSMD2Q7Z408 3487 aa13.28□□□□□ -0.28
KDM1A-202ENST00000400181 GAGE12JA6NER3 117 aa13.27□□□□□ -0.28
KDM1A-202ENST00000400181 GAGE7O76087 117 aa13.27□□□□□ -0.28
KDM1A-202ENST00000400181 GAGE12FP0CL80 117 aa13.27□□□□□ -0.28
KDM1A-202ENST00000400181 GAGE12GP0CL81 117 aa13.27□□□□□ -0.28
KDM1A-202ENST00000400181 GAGE12IP0CL82 117 aa13.27□□□□□ -0.28
KDM1A-202ENST00000400181 GAGE4Q13068 117 aa13.27□□□□□ -0.28
KDM1A-202ENST00000400181 ZNF625Q96I27 306 aaPredicted RBP13.27□□□□□ -0.28
KDM1A-202ENST00000400181 COX6CP09669 75 aa13.27□□□□□ -0.29
KDM1A-202ENST00000400181 SYNJ2BPP57105 145 aa13.27□□□□□ -0.29
KDM1A-202ENST00000400181 C19orf84I3L1E1 186 aa13.26□□□□□ -0.29
KDM1A-202ENST00000400181 TNFRSF18Q9Y5U5 241 aa13.26□□□□□ -0.29
KDM1A-202ENST00000400181 A6NDX4 124 aa13.25□□□□□ -0.29
KDM1A-202ENST00000400181 RPL13AP40429 203 aaKnown RBP13.25□□□□□ -0.29
KDM1A-202ENST00000400181 IGHV1-58A0A0C4DH39 117 aa13.24□□□□□ -0.29
KDM1A-202ENST00000400181 FAM104AQ969W3 186 aa13.24□□□□□ -0.29
KDM1A-202ENST00000400181 IGLV1-40P01703 118 aa13.24□□□□□ -0.29
KDM1A-202ENST00000400181 H3BUA1 57 aa13.24□□□□□ -0.29
KDM1A-202ENST00000400181 LY6DQ14210 128 aa13.24□□□□□ -0.29
KDM1A-202ENST00000400181 RBMY1A1P0DJD3 496 aaKnown RBP13.23□□□□□ -0.29
KDM1A-202ENST00000400181 RBMY1CP0DJD4 496 aa13.23□□□□□ -0.29
KDM1A-202ENST00000400181 RBMY1FQ15415 496 aaKnown RBP13.23□□□□□ -0.29
KDM1A-202ENST00000400181 MYO9AB2RTY4 2548 aa13.23□□□□□ -0.29
KDM1A-202ENST00000400181 MRPS36P82909 103 aaKnown RBP13.22□□□□□ -0.29
KDM1A-202ENST00000400181 M0QXV9 152 aa13.22□□□□□ -0.29
KDM1A-202ENST00000400181 MIAQ16674 131 aa13.22□□□□□ -0.29
KDM1A-202ENST00000400181 Q6ZSN1 163 aa13.22□□□□□ -0.29
KDM1A-202ENST00000400181 VSIG2Q96IQ7 327 aa13.22□□□□□ -0.29
KDM1A-202ENST00000400181 POLQO75417 2590 aa13.21□□□□□ -0.29
KDM1A-202ENST00000400181 K7EMT4 169 aa13.21□□□□□ -0.29
KDM1A-202ENST00000400181 SMIM20Q8N5G0 67 aa13.21□□□□□ -0.29
KDM1A-202ENST00000400181 ZANQ9Y493 2812 aa13.21□□□□□ -0.29
KDM1A-202ENST00000400181 K7EQG2 157 aa13.21□□□□□ -0.3
KDM1A-202ENST00000400181 CHCHD5Q9BSY4 110 aa13.21□□□□□ -0.3
KDM1A-202ENST00000400181 WNK1Q9H4A3 2382 aa13.2□□□□□ -0.3
KDM1A-202ENST00000400181 USP9XQ93008 2570 aaPredicted RBP13.2□□□□□ -0.3
KDM1A-202ENST00000400181 CDKN2A-AS1Q9UH64 79 aa13.2□□□□□ -0.3
KDM1A-202ENST00000400181 TRGV11A0A075B6L2 103 aa13.19□□□□□ -0.3
KDM1A-202ENST00000400181 AVPP01185 164 aa13.19□□□□□ -0.3
KDM1A-202ENST00000400181 TMEM61Q8N0U2 210 aa13.19□□□□□ -0.3
KDM1A-202ENST00000400181 LINC00467Q9BRT7 94 aa13.19□□□□□ -0.3
KDM1A-202ENST00000400181 PIMREGQ9BSJ6 248 aa13.19□□□□□ -0.3
KDM1A-202ENST00000400181 IGHV4-59P01825 116 aa13.18□□□□□ -0.3
KDM1A-202ENST00000400181 CENPEQ02224 2701 aa13.18□□□□□ -0.3
KDM1A-202ENST00000400181 IGHV4-30-2A0A087WSY4 118 aa13.17□□□□□ -0.3
KDM1A-202ENST00000400181 LST1O00453 97 aa13.17□□□□□ -0.3
KDM1A-202ENST00000400181 DEFB131AP59861 70 aa13.17□□□□□ -0.3
KDM1A-202ENST00000400181 SPANXDQ9BXN6 97 aa13.17□□□□□ -0.3
KDM1A-202ENST00000400181 SPANXCQ9NY87 97 aa13.17□□□□□ -0.3
KDM1A-202ENST00000400181 MEIG1Q5JSS6 88 aa13.16□□□□□ -0.3
KDM1A-202ENST00000400181 DGAT2L7PQ6IED9 249 aa13.16□□□□□ -0.3
KDM1A-202ENST00000400181 PYGO1Q9Y3Y4 419 aa13.16□□□□□ -0.3
KDM1A-202ENST00000400181 H3BT86 120 aa13.16□□□□□ -0.3
KDM1A-202ENST00000400181 BRI3O95415 125 aa13.16□□□□□ -0.3
KDM1A-202ENST00000400181 PSMB8P28062 276 aa13.16□□□□□ -0.3
KDM1A-202ENST00000400181 CHCHD7Q9BUK0 85 aa13.16□□□□□ -0.3
KDM1A-202ENST00000400181 UBE2D4Q9Y2X8 147 aa13.16□□□□□ -0.3
KDM1A-202ENST00000400181 NBL1P41271 181 aa13.15□□□□□ -0.3
KDM1A-202ENST00000400181 CFHR3Q02985 330 aa13.15□□□□□ -0.3
KDM1A-202ENST00000400181 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.15□□□□□ -0.3
KDM1A-202ENST00000400181 TINCRA0A1B0GVN0 87 aa13.14□□□□□ -0.31
KDM1A-202ENST00000400181 ATP5J2P56134 94 aa13.14□□□□□ -0.31
KDM1A-202ENST00000400181 DEFB136Q30KP8 78 aa13.14□□□□□ -0.31
KDM1A-202ENST00000400181 HIST2H2BDQ6DRA6 164 aa13.14□□□□□ -0.31
KDM1A-202ENST00000400181 NDUFA7O95182 113 aa13.14□□□□□ -0.31
KDM1A-202ENST00000400181 Q9H8V8 135 aa13.14□□□□□ -0.31
KDM1A-202ENST00000400181 Q6Q795 121 aa13.13□□□□□ -0.31
KDM1A-202ENST00000400181 COX6A2Q02221 97 aa13.13□□□□□ -0.31
KDM1A-202ENST00000400181 YAE1D1Q9NRH1 226 aa13.13□□□□□ -0.31
KDM1A-202ENST00000400181 TLN2Q9Y4G6 2542 aa13.12□□□□□ -0.31
KDM1A-202ENST00000400181 TMEM101Q96IK0 257 aa13.12□□□□□ -0.31
KDM1A-202ENST00000400181 CCL19Q99731 98 aa13.12□□□□□ -0.31
KDM1A-202ENST00000400181 CITED2Q99967 270 aaPredicted RBP13.12□□□□□ -0.31
KDM1A-202ENST00000400181 SETD2Q9BYW2 2564 aaPredicted RBP13.12□□□□□ -0.31
KDM1A-202ENST00000400181 MSMBP08118 114 aa13.12□□□□□ -0.31
KDM1A-202ENST00000400181 HERV-K104P63124 156 aa13.12□□□□□ -0.31
KDM1A-202ENST00000400181 HOXD3P31249 432 aaPredicted RBP13.11□□□□□ -0.31
KDM1A-202ENST00000400181 DEFB112Q30KQ8 113 aa13.11□□□□□ -0.31
KDM1A-202ENST00000400181 IGHV3OR16-12A0A075B7B8 117 aa13.11□□□□□ -0.31
KDM1A-202ENST00000400181 MAPK1IP1LQ8NDC0 245 aa13.11□□□□□ -0.31
KDM1A-202ENST00000400181 C10orf105Q8TEF2 133 aa13.11□□□□□ -0.31
KDM1A-202ENST00000400181 UTP20O75691 2785 aaKnown RBP13.1□□□□□ -0.31
KDM1A-202ENST00000400181 TRAV13-1A0A0B4J241 112 aa13.1□□□□□ -0.31
KDM1A-202ENST00000400181 Q8N2B8 174 aa13.1□□□□□ -0.31
KDM1A-202ENST00000400181 LINC01587Q99440 93 aa13.1□□□□□ -0.31
KDM1A-202ENST00000400181 CIRBPQ14011 172 aaKnown RBP13.1□□□□□ -0.31
KDM1A-202ENST00000400181 SPANXA1Q9NS26 97 aa13.1□□□□□ -0.31
KDM1A-202ENST00000400181 FAM236AA0A1B0GUQ0 79 aa13.09□□□□□ -0.31
KDM1A-202ENST00000400181 FAM236BA0A1B0GV22 79 aa13.09□□□□□ -0.31
KDM1A-202ENST00000400181 GNLYP22749 145 aa13.09□□□□□ -0.31
KDM1A-202ENST00000400181 PTPN13Q12923 2485 aa13.09□□□□□ -0.31
KDM1A-202ENST00000400181 RBMY1BA6NDE4 496 aaKnown RBP13.09□□□□□ -0.31
KDM1A-202ENST00000400181 RBMY1EA6NEQ0 496 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms