RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 C10orf91Q5T1B1 145 aa10.4□□□□□ -0.74
VAPA-202ENST00000400000 CHCHD10Q8WYQ3 142 aaPredicted RBP10.4□□□□□ -0.74
VAPA-202ENST00000400000 H0YGX0 51 aa10.4□□□□□ -0.75
VAPA-202ENST00000400000 TRBV10-2A0A0K0K1G8 114 aa10.39□□□□□ -0.75
VAPA-202ENST00000400000 FREM1Q5H8C1 2179 aa10.39□□□□□ -0.75
VAPA-202ENST00000400000 ZFAND2AQ8N6M9 145 aa10.38□□□□□ -0.75
VAPA-202ENST00000400000 TP73-AS1Q9UF72 201 aa10.38□□□□□ -0.75
VAPA-202ENST00000400000 RPL37AP8A6NKH3 93 aa10.38□□□□□ -0.75
VAPA-202ENST00000400000 PIK3CD-AS1Q5SR53 167 aa10.38□□□□□ -0.75
VAPA-202ENST00000400000 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.37□□□□□ -0.75
VAPA-202ENST00000400000 TRBV10-1A0A0K0K1A3 114 aa10.37□□□□□ -0.75
VAPA-202ENST00000400000 LOC100131303A0A0U1RQF7 123 aa10.37□□□□□ -0.75
VAPA-202ENST00000400000 IGHV1-58A0A0C4DH39 117 aa10.37□□□□□ -0.75
VAPA-202ENST00000400000 C9orf85Q96MD7 179 aa10.37□□□□□ -0.75
VAPA-202ENST00000400000 IGLV9-49A0A0B4J1Y8 123 aa10.37□□□□□ -0.75
VAPA-202ENST00000400000 SMIM20Q8N5G0 67 aa10.37□□□□□ -0.75
VAPA-202ENST00000400000 DSCAMO60469 2012 aa10.37□□□□□ -0.75
VAPA-202ENST00000400000 C3orf84H3BNL1 204 aa10.36□□□□□ -0.75
VAPA-202ENST00000400000 IGLV1-47P01700 117 aa10.36□□□□□ -0.75
VAPA-202ENST00000400000 UBE2D1P51668 147 aa10.36□□□□□ -0.75
VAPA-202ENST00000400000 KRTAP27-1Q3LI81 207 aa10.36□□□□□ -0.75
VAPA-202ENST00000400000 Q8N976 141 aa10.36□□□□□ -0.75
VAPA-202ENST00000400000 K7EMT4 169 aa10.36□□□□□ -0.75
VAPA-202ENST00000400000 ATRXP46100 2492 aa10.36□□□□□ -0.75
VAPA-202ENST00000400000 A8MZ25 164 aa10.36□□□□□ -0.75
VAPA-202ENST00000400000 SDIM1Q6ZPB5 146 aa10.36□□□□□ -0.75
VAPA-202ENST00000400000 BRK1Q8WUW1 75 aa10.36□□□□□ -0.75
VAPA-202ENST00000400000 UBE2D4Q9Y2X8 147 aa10.36□□□□□ -0.75
VAPA-202ENST00000400000 Q6YL49 198 aa10.36□□□□□ -0.75
VAPA-202ENST00000400000 UPK3BQ9BT76 320 aa10.35□□□□□ -0.75
VAPA-202ENST00000400000 PRR14LQ5THK1 2151 aa10.35□□□□□ -0.75
VAPA-202ENST00000400000 LINC00322Q6ZN03 302 aaPredicted RBP10.35□□□□□ -0.75
VAPA-202ENST00000400000 LINC01545Q5VT33 79 aa10.35□□□□□ -0.75
VAPA-202ENST00000400000 BBC3Q96PG8 261 aaPredicted RBP10.35□□□□□ -0.75
VAPA-202ENST00000400000 OXLD1Q5BKU9 147 aa10.35□□□□□ -0.75
VAPA-202ENST00000400000 C1orf229Q6ZS94 237 aaPredicted RBP10.34□□□□□ -0.75
VAPA-202ENST00000400000 C1orf158Q8N1D5 194 aa10.34□□□□□ -0.75
VAPA-202ENST00000400000 TECTAO75443 2155 aa10.34□□□□□ -0.75
VAPA-202ENST00000400000 TMEM256-PLSCR3K7ERE1 68 aa10.34□□□□□ -0.75
VAPA-202ENST00000400000 TEX49A0A1B0GTD5 131 aa10.34□□□□□ -0.75
VAPA-202ENST00000400000 LMO4P61968 165 aa10.34□□□□□ -0.75
VAPA-202ENST00000400000 E9PLD3 99 aa10.33□□□□□ -0.76
VAPA-202ENST00000400000 IL15RAQ13261 267 aa10.33□□□□□ -0.76
VAPA-202ENST00000400000 IL17DQ8TAD2 202 aa10.33□□□□□ -0.76
VAPA-202ENST00000400000 BDP1A6H8Y1 2624 aa10.33□□□□□ -0.76
VAPA-202ENST00000400000 ODF1Q14990 250 aa10.33□□□□□ -0.76
VAPA-202ENST00000400000 RETNLBQ9BQ08 111 aa10.33□□□□□ -0.76
VAPA-202ENST00000400000 BPY2O14599 106 aa10.33□□□□□ -0.76
VAPA-202ENST00000400000 DEFB114Q30KQ6 69 aa10.33□□□□□ -0.76
VAPA-202ENST00000400000 Q6ZSV7 163 aa10.33□□□□□ -0.76
VAPA-202ENST00000400000 PCDH15Q96QU1 1955 aa10.33□□□□□ -0.76
VAPA-202ENST00000400000 NANOS2P60321 138 aaKnown RBP10.32□□□□□ -0.76
VAPA-202ENST00000400000 IGF2-ASQ6U949 168 aa10.32□□□□□ -0.76
VAPA-202ENST00000400000 TCL1BO95988 128 aa10.32□□□□□ -0.76
VAPA-202ENST00000400000 CLUHP3Q96NS8 147 aa10.32□□□□□ -0.76
VAPA-202ENST00000400000 KIAA1549LQ6ZVL6 1849 aa10.32□□□□□ -0.76
VAPA-202ENST00000400000 INSL3P51460 131 aa10.32□□□□□ -0.76
VAPA-202ENST00000400000 CXCL5P42830 114 aa10.31□□□□□ -0.76
VAPA-202ENST00000400000 Q6ZS46 218 aa10.31□□□□□ -0.76
VAPA-202ENST00000400000 C20orf203Q8NBC4 194 aa10.31□□□□□ -0.76
VAPA-202ENST00000400000 PRR4Q16378 134 aa10.31□□□□□ -0.76
VAPA-202ENST00000400000 HIVEP2P31629 2446 aa10.31□□□□□ -0.76
VAPA-202ENST00000400000 PTPN13Q12923 2485 aa10.31□□□□□ -0.76
VAPA-202ENST00000400000 NEXN-AS1Q8NBZ9 246 aa10.31□□□□□ -0.76
VAPA-202ENST00000400000 PCNX3Q9H6A9 2034 aa10.31□□□□□ -0.76
VAPA-202ENST00000400000 UBE2D3P61077 147 aa10.3□□□□□ -0.76
VAPA-202ENST00000400000 C3orf22Q8N5N4 141 aa10.3□□□□□ -0.76
VAPA-202ENST00000400000 CEP192Q8TEP8 1941 aa10.3□□□□□ -0.76
VAPA-202ENST00000400000 CTRLP40313 264 aa10.3□□□□□ -0.76
VAPA-202ENST00000400000 C14orf177Q52M58 125 aa10.3□□□□□ -0.76
VAPA-202ENST00000400000 CDKN2A-AS1Q9UH64 79 aa10.3□□□□□ -0.76
VAPA-202ENST00000400000 A0A0J9YXY3 114 aa10.3□□□□□ -0.76
VAPA-202ENST00000400000 TNFRSF13BO14836 293 aaPredicted RBP10.29□□□□□ -0.76
VAPA-202ENST00000400000 ENHOQ6UWT2 76 aa10.29□□□□□ -0.76
VAPA-202ENST00000400000 USP17L23D6RBM5 183 aa10.29□□□□□ -0.76
VAPA-202ENST00000400000 ATOX1O00244 68 aa10.29□□□□□ -0.76
VAPA-202ENST00000400000 NUP210LQ5VU65 1888 aa10.28□□□□□ -0.76
VAPA-202ENST00000400000 MIAQ16674 131 aa10.28□□□□□ -0.76
VAPA-202ENST00000400000 JMJD7-PLA2G4BH0Y9G9 81 aa10.28□□□□□ -0.76
VAPA-202ENST00000400000 SHISA2Q6UWI4 295 aa10.28□□□□□ -0.76
VAPA-202ENST00000400000 POM121L12Q8N7R1 296 aa10.28□□□□□ -0.76
VAPA-202ENST00000400000 C7orf33Q8WU49 177 aa10.28□□□□□ -0.76
VAPA-202ENST00000400000 TEN1Q86WV5 123 aa10.27□□□□□ -0.76
VAPA-202ENST00000400000 TAX1BP3O14907 124 aa10.27□□□□□ -0.76
VAPA-202ENST00000400000 UFSP1Q6NVU6 142 aa10.27□□□□□ -0.77
VAPA-202ENST00000400000 WFDC13Q8IUB5 93 aa10.27□□□□□ -0.77
VAPA-202ENST00000400000 CFAP126Q5VTH2 177 aa10.26□□□□□ -0.77
VAPA-202ENST00000400000 A0A0U1RQV1 116 aa10.26□□□□□ -0.77
VAPA-202ENST00000400000 EDN2P20800 178 aa10.26□□□□□ -0.77
VAPA-202ENST00000400000 PLA2G2AP14555 144 aa10.25□□□□□ -0.77
VAPA-202ENST00000400000 SORL1Q92673 2214 aa10.25□□□□□ -0.77
VAPA-202ENST00000400000 MED14OSP0DP75 135 aa10.25□□□□□ -0.77
VAPA-202ENST00000400000 LY6LH3BQJ8 138 aa10.25□□□□□ -0.77
VAPA-202ENST00000400000 CUL9Q8IWT3 2517 aa10.25□□□□□ -0.77
VAPA-202ENST00000400000 KPRPQ5T749 579 aaPredicted RBP10.24□□□□□ -0.77
VAPA-202ENST00000400000 RNASE8Q8TDE3 154 aaKnown RBP10.24□□□□□ -0.77
VAPA-202ENST00000400000 KIR2DL5BA0A0G2JN68 375 aa10.24□□□□□ -0.77
VAPA-202ENST00000400000 KIR2DL5BA0A0G2JPC4 375 aa10.24□□□□□ -0.77
VAPA-202ENST00000400000 ODF3BA8MYP8 253 aa10.24□□□□□ -0.77
VAPA-202ENST00000400000 KIR2DL5AQ8N109 375 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms