RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 SORL1Q92673 2214 aa18.7■□□□□ 0.58
COL13A1-203ENST00000398969 SLURP1P55000 103 aa18.7■□□□□ 0.58
COL13A1-203ENST00000398969 WFDC11Q8NEX6 87 aa18.7■□□□□ 0.58
COL13A1-203ENST00000398969 A8MTW9 85 aa18.69■□□□□ 0.58
COL13A1-203ENST00000398969 EIF4EBP3O60516 100 aaPredicted RBP18.69■□□□□ 0.58
COL13A1-203ENST00000398969 HELZ2Q9BYK8 2649 aaKnown RBP18.69■□□□□ 0.58
COL13A1-203ENST00000398969 RBMY1BA6NDE4 496 aaKnown RBP18.69■□□□□ 0.58
COL13A1-203ENST00000398969 RBMY1EA6NEQ0 496 aaKnown RBP18.69■□□□□ 0.58
COL13A1-203ENST00000398969 RBMY1DP0C7P1 496 aaKnown RBP18.69■□□□□ 0.58
COL13A1-203ENST00000398969 CD28P10747 220 aa18.69■□□□□ 0.58
COL13A1-203ENST00000398969 DEFB136Q30KP8 78 aa18.69■□□□□ 0.58
COL13A1-203ENST00000398969 C18orf65Q6ZTR6 163 aa18.69■□□□□ 0.58
COL13A1-203ENST00000398969 MXRA5Q9NR99 2828 aa18.68■□□□□ 0.58
COL13A1-203ENST00000398969 TRAV2A0A0B4J234 112 aa18.68■□□□□ 0.58
COL13A1-203ENST00000398969 H3BMM0 161 aa18.68■□□□□ 0.58
COL13A1-203ENST00000398969 PTH2Q96A98 100 aa18.68■□□□□ 0.58
COL13A1-203ENST00000398969 PRM2P04554 102 aa18.67■□□□□ 0.58
COL13A1-203ENST00000398969 MUSTN1Q8IVN3 82 aa18.66■□□□□ 0.58
COL13A1-203ENST00000398969 TMEM263Q8WUH6 116 aaKnown RBP18.66■□□□□ 0.58
COL13A1-203ENST00000398969 DUX3Q96PT4 197 aa18.66■□□□□ 0.58
COL13A1-203ENST00000398969 TNFRSF18Q9Y5U5 241 aa18.66■□□□□ 0.58
COL13A1-203ENST00000398969 SCGB1C2P0DMR2 95 aa18.66■□□□□ 0.58
COL13A1-203ENST00000398969 SBSPONQ8IVN8 264 aa18.66■□□□□ 0.58
COL13A1-203ENST00000398969 ITPR3Q14573 2671 aa18.65■□□□□ 0.58
COL13A1-203ENST00000398969 A8MWV9 139 aa18.65■□□□□ 0.58
COL13A1-203ENST00000398969 M0R2P5 195 aa18.65■□□□□ 0.58
COL13A1-203ENST00000398969 MRPS36P82909 103 aaKnown RBP18.65■□□□□ 0.58
COL13A1-203ENST00000398969 CEMP1Q6PRD7 247 aaPredicted RBP18.65■□□□□ 0.58
COL13A1-203ENST00000398969 SPXQ9BT56 116 aa18.65■□□□□ 0.58
COL13A1-203ENST00000398969 A0A0J9YXY3 114 aa18.65■□□□□ 0.58
COL13A1-203ENST00000398969 IGHV3-33P01772 117 aa18.65■□□□□ 0.58
COL13A1-203ENST00000398969 IGHV3-30-3P0DP02 117 aa18.65■□□□□ 0.58
COL13A1-203ENST00000398969 TEN1Q86WV5 123 aa18.65■□□□□ 0.58
COL13A1-203ENST00000398969 RAX2Q96IS3 184 aa18.65■□□□□ 0.58
COL13A1-203ENST00000398969 A0A0B4J2C4 111 aa18.64■□□□□ 0.57
COL13A1-203ENST00000398969 CRYBA4P53673 196 aa18.64■□□□□ 0.57
COL13A1-203ENST00000398969 TIMM21Q9BVV7 248 aa18.63■□□□□ 0.57
COL13A1-203ENST00000398969 Q9UF83 564 aa18.63■□□□□ 0.57
COL13A1-203ENST00000398969 Q6ZSN1 163 aa18.62■□□□□ 0.57
COL13A1-203ENST00000398969 PPDPFLQ8WWR9 84 aa18.62■□□□□ 0.57
COL13A1-203ENST00000398969 CARD19Q96LW7 228 aa18.62■□□□□ 0.57
COL13A1-203ENST00000398969 CCDC168Q8NDH2 2452 aa18.62■□□□□ 0.57
COL13A1-203ENST00000398969 ZNF415Q09FC8 603 aa18.62■□□□□ 0.57
COL13A1-203ENST00000398969 TMEM61Q8N0U2 210 aa18.62■□□□□ 0.57
COL13A1-203ENST00000398969 PIK3CD-AS1Q5SR53 167 aa18.61■□□□□ 0.57
COL13A1-203ENST00000398969 RNASE13Q5GAN3 156 aaKnown RBP18.61■□□□□ 0.57
COL13A1-203ENST00000398969 CDIP1Q9H305 208 aa18.61■□□□□ 0.57
COL13A1-203ENST00000398969 ERG28Q9UKR5 140 aa18.61■□□□□ 0.57
COL13A1-203ENST00000398969 ADARB2-AS1A8MUL3 147 aa18.6■□□□□ 0.57
COL13A1-203ENST00000398969 CHCHD7Q9BUK0 85 aa18.6■□□□□ 0.57
COL13A1-203ENST00000398969 NACAE9PAV3 2078 aa18.6■□□□□ 0.57
COL13A1-203ENST00000398969 TRAV8-3A0A0A6YYJ7 113 aa18.6■□□□□ 0.57
COL13A1-203ENST00000398969 TLN2Q9Y4G6 2542 aa18.59■□□□□ 0.57
COL13A1-203ENST00000398969 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.59■□□□□ 0.57
COL13A1-203ENST00000398969 LITAFQ99732 161 aa18.59■□□□□ 0.57
COL13A1-203ENST00000398969 FHL3Q13643 280 aa18.58■□□□□ 0.57
COL13A1-203ENST00000398969 PDZD2O15018 2839 aa18.58■□□□□ 0.57
COL13A1-203ENST00000398969 H7C2G1 150 aa18.58■□□□□ 0.56
COL13A1-203ENST00000398969 PEMTQ9UBM1 199 aa18.58■□□□□ 0.56
COL13A1-203ENST00000398969 UBE2D4Q9Y2X8 147 aa18.58■□□□□ 0.56
COL13A1-203ENST00000398969 IGHV1-58A0A0C4DH39 117 aa18.57■□□□□ 0.56
COL13A1-203ENST00000398969 MAP6D1Q9H9H5 199 aa18.57■□□□□ 0.56
COL13A1-203ENST00000398969 SPANXA1Q9NS26 97 aa18.57■□□□□ 0.56
COL13A1-203ENST00000398969 Q8N2B8 174 aa18.57■□□□□ 0.56
COL13A1-203ENST00000398969 ANKRD29Q8N6D5 301 aa18.56■□□□□ 0.56
COL13A1-203ENST00000398969 C11orf72Q8NBR9 251 aa18.56■□□□□ 0.56
COL13A1-203ENST00000398969 TINCRA0A1B0GVN0 87 aa18.55■□□□□ 0.56
COL13A1-203ENST00000398969 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.54■□□□□ 0.56
COL13A1-203ENST00000398969 IGKV2-29A2NJV5 120 aaPredicted RBP18.54■□□□□ 0.56
COL13A1-203ENST00000398969 LINC01587Q99440 93 aa18.54■□□□□ 0.56
COL13A1-203ENST00000398969 C4orf3Q8WVX3 66 aa18.54■□□□□ 0.56
COL13A1-203ENST00000398969 FLNAP21333 2647 aaKnown RBP18.54■□□□□ 0.56
COL13A1-203ENST00000398969 VSIG2Q96IQ7 327 aa18.53■□□□□ 0.56
COL13A1-203ENST00000398969 LINC00467Q9BRT7 94 aa18.53■□□□□ 0.56
COL13A1-203ENST00000398969 SLC25A20O43772 301 aa18.53■□□□□ 0.56
COL13A1-203ENST00000398969 IGHV3-53P01767 116 aa18.53■□□□□ 0.56
COL13A1-203ENST00000398969 TEX29Q8N6K0 151 aa18.53■□□□□ 0.56
COL13A1-203ENST00000398969 NDUFA12Q9UI09 145 aa18.53■□□□□ 0.56
COL13A1-203ENST00000398969 ITPR2Q14571 2701 aa18.52■□□□□ 0.56
COL13A1-203ENST00000398969 C9JAW5 83 aa18.52■□□□□ 0.56
COL13A1-203ENST00000398969 Q1RN00 199 aa18.52■□□□□ 0.56
COL13A1-203ENST00000398969 Q6ZUT4 128 aa18.52■□□□□ 0.56
COL13A1-203ENST00000398969 ADAMTSL4-AS1Q5T5F5 129 aa18.52■□□□□ 0.55
COL13A1-203ENST00000398969 DYNLRB2Q8TF09 96 aa18.52■□□□□ 0.55
COL13A1-203ENST00000398969 IGHV3-38A0A0C4DH36 116 aa18.51■□□□□ 0.55
COL13A1-203ENST00000398969 BEAN1Q3B7T3 259 aa18.51■□□□□ 0.55
COL13A1-203ENST00000398969 DNAJC30Q96LL9 226 aa18.51■□□□□ 0.55
COL13A1-203ENST00000398969 SPINK8P0C7L1 97 aa18.51■□□□□ 0.55
COL13A1-203ENST00000398969 KHDC1LQ5JSQ8 128 aa18.51■□□□□ 0.55
COL13A1-203ENST00000398969 M0QXV9 152 aa18.5■□□□□ 0.55
COL13A1-203ENST00000398969 INSP01308 110 aa18.5■□□□□ 0.55
COL13A1-203ENST00000398969 SPANXDQ9BXN6 97 aa18.5■□□□□ 0.55
COL13A1-203ENST00000398969 SPANXCQ9NY87 97 aa18.5■□□□□ 0.55
COL13A1-203ENST00000398969 SONP18583 2426 aaKnown RBP18.5■□□□□ 0.55
COL13A1-203ENST00000398969 A8MZ25 164 aa18.49■□□□□ 0.55
COL13A1-203ENST00000398969 PRSS2P07478 247 aa18.49■□□□□ 0.55
COL13A1-203ENST00000398969 DEFB114Q30KQ6 69 aa18.49■□□□□ 0.55
COL13A1-203ENST00000398969 UNC79Q9P2D8 2635 aa18.49■□□□□ 0.55
COL13A1-203ENST00000398969 RS1O15537 224 aa18.48■□□□□ 0.55
COL13A1-203ENST00000398969 TRBV30A0A0K0K1B3 111 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms