RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 K7EQD1 137 aa8.32□□□□□ -1.08
HPS4-202ENST00000398145 ATP5G1P05496 136 aa8.32□□□□□ -1.08
HPS4-202ENST00000398145 COX7B2Q8TF08 81 aa8.32□□□□□ -1.08
HPS4-202ENST00000398145 PRRC2CQ9Y520 2896 aaKnown RBP8.32□□□□□ -1.08
HPS4-202ENST00000398145 COX7A2LO14548 114 aa8.32□□□□□ -1.08
HPS4-202ENST00000398145 IGHV4-30-2A0A087WSY4 118 aa8.31□□□□□ -1.08
HPS4-202ENST00000398145 LECT2O14960 151 aa8.31□□□□□ -1.08
HPS4-202ENST00000398145 LMO4P61968 165 aa8.31□□□□□ -1.08
HPS4-202ENST00000398145 M0QY20 66 aa8.31□□□□□ -1.08
HPS4-202ENST00000398145 CLPSL2Q6UWE3 100 aa8.31□□□□□ -1.08
HPS4-202ENST00000398145 ODF3Q96PU9 254 aa8.31□□□□□ -1.08
HPS4-202ENST00000398145 ANGP03950 147 aaKnown RBP8.31□□□□□ -1.08
HPS4-202ENST00000398145 CDKN2A-AS1Q9UH64 79 aa8.31□□□□□ -1.08
HPS4-202ENST00000398145 TRBV6-5A0A0K0K1A5 114 aa8.31□□□□□ -1.08
HPS4-202ENST00000398145 MIR7-3HGQ8N6C7 128 aa8.31□□□□□ -1.08
HPS4-202ENST00000398145 DPH3Q96FX2 82 aa8.31□□□□□ -1.08
HPS4-202ENST00000398145 RNASE3P12724 160 aaKnown RBP8.3□□□□□ -1.08
HPS4-202ENST00000398145 C10orf105Q8TEF2 133 aa8.3□□□□□ -1.08
HPS4-202ENST00000398145 POLR2KP53803 58 aaKnown RBP8.3□□□□□ -1.08
HPS4-202ENST00000398145 Q6ZS46 218 aa8.3□□□□□ -1.08
HPS4-202ENST00000398145 TET2Q6N021 2002 aaPredicted RBP8.3□□□□□ -1.08
HPS4-202ENST00000398145 ZNF561-AS1K7EIQ3 104 aa8.3□□□□□ -1.08
HPS4-202ENST00000398145 PRR9Q5T870 116 aa8.3□□□□□ -1.08
HPS4-202ENST00000398145 HIST2H2BCQ6DN03 193 aa8.3□□□□□ -1.08
HPS4-202ENST00000398145 TMEM89A2RUT3 159 aa8.29□□□□□ -1.08
HPS4-202ENST00000398145 Q8N6K4 173 aa8.29□□□□□ -1.08
HPS4-202ENST00000398145 CEP295Q9C0D2 2601 aa8.29□□□□□ -1.08
HPS4-202ENST00000398145 A6NDX4 124 aa8.29□□□□□ -1.08
HPS4-202ENST00000398145 HIST2H2BDQ6DRA6 164 aa8.29□□□□□ -1.08
HPS4-202ENST00000398145 COX8CQ7Z4L0 72 aa8.29□□□□□ -1.08
HPS4-202ENST00000398145 CLUHP3Q96NS8 147 aa8.29□□□□□ -1.08
HPS4-202ENST00000398145 Q9HAA7 133 aa8.29□□□□□ -1.08
HPS4-202ENST00000398145 F5H768 121 aa8.29□□□□□ -1.08
HPS4-202ENST00000398145 A0A096LPF7 62 aa8.29□□□□□ -1.08
HPS4-202ENST00000398145 JMJD7-PLA2G4BH0Y9G9 81 aa8.29□□□□□ -1.08
HPS4-202ENST00000398145 UBE2D1P51668 147 aa8.29□□□□□ -1.08
HPS4-202ENST00000398145 DAD1P61803 113 aa8.29□□□□□ -1.08
HPS4-202ENST00000398145 USP9XQ93008 2570 aaPredicted RBP8.28□□□□□ -1.08
HPS4-202ENST00000398145 TNFRSF13BO14836 293 aaPredicted RBP8.28□□□□□ -1.08
HPS4-202ENST00000398145 NBL1P41271 181 aa8.28□□□□□ -1.08
HPS4-202ENST00000398145 TMEM61Q8N0U2 210 aa8.28□□□□□ -1.08
HPS4-202ENST00000398145 TRBV10-1A0A0K0K1A3 114 aa8.28□□□□□ -1.08
HPS4-202ENST00000398145 K7EQG2 157 aa8.28□□□□□ -1.08
HPS4-202ENST00000398145 UQCRQO14949 82 aa8.28□□□□□ -1.08
HPS4-202ENST00000398145 NCOR2Q9Y618 2525 aa8.28□□□□□ -1.08
HPS4-202ENST00000398145 RBM3P98179 157 aaKnown RBP8.28□□□□□ -1.08
HPS4-202ENST00000398145 TLN2Q9Y4G6 2542 aa8.27□□□□□ -1.09
HPS4-202ENST00000398145 TRAV25A0A0B4J276 109 aa8.27□□□□□ -1.09
HPS4-202ENST00000398145 USP9YO00507 2555 aaPredicted RBP8.27□□□□□ -1.09
HPS4-202ENST00000398145 SETD2Q9BYW2 2564 aaPredicted RBP8.27□□□□□ -1.09
HPS4-202ENST00000398145 PYGO1Q9Y3Y4 419 aa8.27□□□□□ -1.09
HPS4-202ENST00000398145 CCL24O00175 119 aa8.26□□□□□ -1.09
HPS4-202ENST00000398145 LINC00308Q8TCZ7 52 aa8.26□□□□□ -1.09
HPS4-202ENST00000398145 LINC00467Q9BRT7 94 aa8.26□□□□□ -1.09
HPS4-202ENST00000398145 ABCA2Q9BZC7 2435 aa8.26□□□□□ -1.09
HPS4-202ENST00000398145 IGIPA6NJ69 53 aa8.26□□□□□ -1.09
HPS4-202ENST00000398145 Q6ZQT7 251 aa8.26□□□□□ -1.09
HPS4-202ENST00000398145 C16orf74Q96GX8 76 aa8.26□□□□□ -1.09
HPS4-202ENST00000398145 C14orf132Q9NPU4 83 aa8.26□□□□□ -1.09
HPS4-202ENST00000398145 HIVEP3Q5T1R4 2406 aa8.26□□□□□ -1.09
HPS4-202ENST00000398145 CLPSL1A2RUU4 121 aa8.25□□□□□ -1.09
HPS4-202ENST00000398145 F8WEM9 126 aa8.25□□□□□ -1.09
HPS4-202ENST00000398145 hADV29S1A0JD25 119 aa8.25□□□□□ -1.09
HPS4-202ENST00000398145 KLLNB2CW77 178 aa8.25□□□□□ -1.09
HPS4-202ENST00000398145 Q96MF0 132 aa8.25□□□□□ -1.09
HPS4-202ENST00000398145 LST1O00453 97 aa8.24□□□□□ -1.09
HPS4-202ENST00000398145 PSMB8P28062 276 aa8.24□□□□□ -1.09
HPS4-202ENST00000398145 UBE2D3P61077 147 aa8.24□□□□□ -1.09
HPS4-202ENST00000398145 UBE2D2P62837 147 aa8.24□□□□□ -1.09
HPS4-202ENST00000398145 HIVEP2P31629 2446 aa8.24□□□□□ -1.09
HPS4-202ENST00000398145 TSHBP01222 138 aa8.24□□□□□ -1.09
HPS4-202ENST00000398145 PSMG3-AS1Q96PY0 264 aa8.24□□□□□ -1.09
HPS4-202ENST00000398145 PIEZO1Q92508 2521 aa8.24□□□□□ -1.09
HPS4-202ENST00000398145 NDUFA1O15239 70 aa8.24□□□□□ -1.09
HPS4-202ENST00000398145 TMEM263Q8WUH6 116 aaKnown RBP8.24□□□□□ -1.09
HPS4-202ENST00000398145 IMUPQ9GZP8 106 aa8.24□□□□□ -1.09
HPS4-202ENST00000398145 GYPEP15421 78 aa8.23□□□□□ -1.09
HPS4-202ENST00000398145 TIRAPP58753 221 aa8.23□□□□□ -1.09
HPS4-202ENST00000398145 IGLV2-18A0A075B6J9 118 aa8.23□□□□□ -1.09
HPS4-202ENST00000398145 F8W735 103 aaPredicted RBP8.23□□□□□ -1.09
HPS4-202ENST00000398145 TIMM17BO60830 172 aa8.23□□□□□ -1.09
HPS4-202ENST00000398145 CRYGDP07320 174 aa8.23□□□□□ -1.09
HPS4-202ENST00000398145 A8MZ25 164 aa8.22□□□□□ -1.09
HPS4-202ENST00000398145 CCDC179H3BU77 68 aa8.22□□□□□ -1.09
HPS4-202ENST00000398145 TMEM256-PLSCR3K7ERE1 68 aa8.22□□□□□ -1.09
HPS4-202ENST00000398145 NKAPP1Q8N9T2 125 aa8.22□□□□□ -1.09
HPS4-202ENST00000398145 IGLV10-54A0A075B6I4 117 aa8.22□□□□□ -1.09
HPS4-202ENST00000398145 C3orf22Q8N5N4 141 aa8.22□□□□□ -1.09
HPS4-202ENST00000398145 TMEM258P61165 79 aa8.21□□□□□ -1.09
HPS4-202ENST00000398145 BPTFQ12830 3046 aa8.21□□□□□ -1.09
HPS4-202ENST00000398145 SDIM1Q6ZPB5 146 aa8.21□□□□□ -1.09
HPS4-202ENST00000398145 ANKRD11Q6UB99 2663 aaPredicted RBP8.21□□□□□ -1.1
HPS4-202ENST00000398145 PROK1P58294 105 aa8.21□□□□□ -1.1
HPS4-202ENST00000398145 Q6Q795 121 aa8.21□□□□□ -1.1
HPS4-202ENST00000398145 MAP6D1Q9H9H5 199 aa8.21□□□□□ -1.1
HPS4-202ENST00000398145 ADAMTS20P59510 1910 aa8.21□□□□□ -1.1
HPS4-202ENST00000398145 H7C423 109 aa8.21□□□□□ -1.1
HPS4-202ENST00000398145 PIK3CD-AS1Q5SR53 167 aa8.21□□□□□ -1.1
HPS4-202ENST00000398145 C11orf71Q6IPW1 123 aa8.21□□□□□ -1.1
HPS4-202ENST00000398145 MRGPRG-AS1Q2M3A8 158 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms