RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 CAMPP49913 170 aa10.62□□□□□ -0.71
CUX2-202ENST00000397643 RAB4BP61018 213 aa10.62□□□□□ -0.71
CUX2-202ENST00000397643 HBBP68871 147 aa10.62□□□□□ -0.71
CUX2-202ENST00000397643 LAGE3Q14657 143 aa10.62□□□□□ -0.71
CUX2-202ENST00000397643 ZNF56Q15929 161 aa10.62□□□□□ -0.71
CUX2-202ENST00000397643 TMEM191AQ9H0A3 160 aa10.62□□□□□ -0.71
CUX2-202ENST00000397643 PLA2G2DQ9UNK4 145 aa10.62□□□□□ -0.71
CUX2-202ENST00000397643 URGCP-MRPS24S4R325 110 aa10.62□□□□□ -0.71
CUX2-202ENST00000397643 TRAV8-6A0A0B4J262 113 aa10.61□□□□□ -0.71
CUX2-202ENST00000397643 TRBV6-4A0A1B0GX49 114 aa10.61□□□□□ -0.71
CUX2-202ENST00000397643 A0A1B0GXF2 115 aa10.61□□□□□ -0.71
CUX2-202ENST00000397643 OXTP01178 125 aa10.61□□□□□ -0.71
CUX2-202ENST00000397643 S100A1P23297 94 aa10.61□□□□□ -0.71
CUX2-202ENST00000397643 RHOHQ15669 191 aa10.6□□□□□ -0.71
CUX2-202ENST00000397643 LINC01620Q4KN68 170 aa10.6□□□□□ -0.71
CUX2-202ENST00000397643 OR10J3Q5JRS4 329 aa10.6□□□□□ -0.71
CUX2-202ENST00000397643 LELP1Q5T871 98 aa10.6□□□□□ -0.71
CUX2-202ENST00000397643 Q8N3U1 123 aa10.6□□□□□ -0.71
CUX2-202ENST00000397643 SLC25A29Q8N8R3 303 aa10.6□□□□□ -0.71
CUX2-202ENST00000397643 PRADC1Q9BSG0 188 aa10.6□□□□□ -0.71
CUX2-202ENST00000397643 SMCO4Q9NRQ5 59 aa10.6□□□□□ -0.71
CUX2-202ENST00000397643 LECT2O14960 151 aa10.59□□□□□ -0.71
CUX2-202ENST00000397643 ATP6V1G1O75348 118 aa10.59□□□□□ -0.71
CUX2-202ENST00000397643 RASL11AQ6T310 242 aa10.59□□□□□ -0.71
CUX2-202ENST00000397643 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.58□□□□□ -0.72
CUX2-202ENST00000397643 H7C1H1 209 aa10.58□□□□□ -0.72
CUX2-202ENST00000397643 GATD1Q8NB37 220 aa10.58□□□□□ -0.72
CUX2-202ENST00000397643 TM2D2Q9BX73 214 aa10.58□□□□□ -0.72
CUX2-202ENST00000397643 FAM104BQ5XKR9 115 aa10.57□□□□□ -0.72
CUX2-202ENST00000397643 SUMO4Q6EEV6 95 aa10.57□□□□□ -0.72
CUX2-202ENST00000397643 AMN1Q8IY45 258 aa10.57□□□□□ -0.72
CUX2-202ENST00000397643 TRBV10-1A0A0K0K1A3 114 aa10.56□□□□□ -0.72
CUX2-202ENST00000397643 RAB4AP20338 218 aa10.56□□□□□ -0.72
CUX2-202ENST00000397643 ELOBQ15370 118 aa10.56□□□□□ -0.72
CUX2-202ENST00000397643 COX19Q49B96 90 aa10.56□□□□□ -0.72
CUX2-202ENST00000397643 CHAC1Q9BUX1 264 aa10.56□□□□□ -0.72
CUX2-202ENST00000397643 TRBV24-1A0A075B6N3 115 aa10.55□□□□□ -0.72
CUX2-202ENST00000397643 M0QY20 66 aa10.55□□□□□ -0.72
CUX2-202ENST00000397643 CBLN2Q8IUK8 224 aa10.55□□□□□ -0.72
CUX2-202ENST00000397643 CIRBP-AS1Q8TBR5 109 aa10.55□□□□□ -0.72
CUX2-202ENST00000397643 MRAP2Q96G30 205 aa10.55□□□□□ -0.72
CUX2-202ENST00000397643 RNF185Q96GF1 192 aa10.55□□□□□ -0.72
CUX2-202ENST00000397643 GTSF1LQ9H1H1 148 aa10.55□□□□□ -0.72
CUX2-202ENST00000397643 TGIF2-C20orf24A0A0A6YYL0 155 aa10.54□□□□□ -0.72
CUX2-202ENST00000397643 RPL36AP83881 106 aaKnown RBP10.54□□□□□ -0.72
CUX2-202ENST00000397643 RPL36ALQ969Q0 106 aaKnown RBP10.54□□□□□ -0.72
CUX2-202ENST00000397643 TRAV8-3A0A0A6YYJ7 113 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 TRAV26-2A0A0B4J265 109 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 GAGE12JA6NER3 117 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 GAGE1Q13065 139 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 GAGE4Q13068 117 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 GAGE5Q13069 117 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 MRPL51Q4U2R6 128 aaKnown RBP10.53□□□□□ -0.72
CUX2-202ENST00000397643 GAGE13Q4V321 117 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 TMEM136Q6ZRR5 245 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 BAALCQ8WXS3 180 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 DNAJC30Q96LL9 226 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 GNB1LQ9BYB4 327 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 NIT2Q9NQR4 276 aa10.53□□□□□ -0.72
CUX2-202ENST00000397643 HLA-DQA1P01909 254 aa10.52□□□□□ -0.73
CUX2-202ENST00000397643 LINC00694P0DN24 101 aa10.52□□□□□ -0.73
CUX2-202ENST00000397643 CKS2P33552 79 aa10.52□□□□□ -0.73
CUX2-202ENST00000397643 DAZ4Q86SG3 579 aaKnown RBP10.52□□□□□ -0.73
CUX2-202ENST00000397643 NEXN-AS1Q8NBZ9 246 aa10.52□□□□□ -0.73
CUX2-202ENST00000397643 ATP6V0E2Q8NHE4 81 aa10.52□□□□□ -0.73
CUX2-202ENST00000397643 YPEL4Q96NS1 127 aa10.52□□□□□ -0.73
CUX2-202ENST00000397643 DAZ3Q9NR90 486 aaKnown RBP10.52□□□□□ -0.73
CUX2-202ENST00000397643 TRBV7-3A0A075B6L6 115 aa10.51□□□□□ -0.73
CUX2-202ENST00000397643 PPP1R17O96001 155 aa10.51□□□□□ -0.73
CUX2-202ENST00000397643 PPBPP02775 128 aa10.51□□□□□ -0.73
CUX2-202ENST00000397643 MT-ND6P03923 174 aa10.51□□□□□ -0.73
CUX2-202ENST00000397643 HNRNPA3P51991 378 aaKnown RBP10.51□□□□□ -0.73
CUX2-202ENST00000397643 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.51□□□□□ -0.73
CUX2-202ENST00000397643 Q9UF83 564 aa10.51□□□□□ -0.73
CUX2-202ENST00000397643 SCO1O75880 301 aa10.5□□□□□ -0.73
CUX2-202ENST00000397643 APCSP02743 223 aa10.5□□□□□ -0.73
CUX2-202ENST00000397643 SMKR1H3BMG3 65 aa10.49□□□□□ -0.73
CUX2-202ENST00000397643 NCR2O95944 276 aa10.49□□□□□ -0.73
CUX2-202ENST00000397643 ORMDL3Q8N138 153 aa10.49□□□□□ -0.73
CUX2-202ENST00000397643 D6R8Y8 96 aa10.48□□□□□ -0.73
CUX2-202ENST00000397643 UBE2D3P61077 147 aa10.48□□□□□ -0.73
CUX2-202ENST00000397643 UBE2D2P62837 147 aa10.48□□□□□ -0.73
CUX2-202ENST00000397643 Q8N976 141 aa10.48□□□□□ -0.73
CUX2-202ENST00000397643 RPL39LQ96EH5 51 aaKnown RBP10.48□□□□□ -0.73
CUX2-202ENST00000397643 ST20Q9HBF5 79 aa10.48□□□□□ -0.73
CUX2-202ENST00000397643 TNXBP22105 4242 aa10.47□□□□□ -0.73
CUX2-202ENST00000397643 TRBV6-5A0A0K0K1A5 114 aa10.47□□□□□ -0.73
CUX2-202ENST00000397643 GAS8-AS1O95177 125 aa10.47□□□□□ -0.73
CUX2-202ENST00000397643 MT1HL1P0DM35 61 aa10.47□□□□□ -0.73
CUX2-202ENST00000397643 FABP9Q0Z7S8 132 aa10.47□□□□□ -0.73
CUX2-202ENST00000397643 PRELID3AQ96N28 172 aa10.47□□□□□ -0.73
CUX2-202ENST00000397643 MRPL18Q9H0U6 180 aaKnown RBP10.47□□□□□ -0.73
CUX2-202ENST00000397643 TRAPPC1Q9Y5R8 145 aa10.47□□□□□ -0.73
CUX2-202ENST00000397643 COX11Q9Y6N1 276 aa10.47□□□□□ -0.73
CUX2-202ENST00000397643 LRP2P98164 4655 aa10.46□□□□□ -0.73
CUX2-202ENST00000397643 PHOX2AO14813 284 aa10.46□□□□□ -0.73
CUX2-202ENST00000397643 RPS10P46783 165 aaKnown RBP10.46□□□□□ -0.73
CUX2-202ENST00000397643 NRACQ8N912 160 aa10.46□□□□□ -0.73
CUX2-202ENST00000397643 RNF213Q63HN8 5207 aa10.45□□□□□ -0.74
CUX2-202ENST00000397643 COLCA2A8K830 154 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 285.6 ms