RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 C14orf132Q9NPU4 83 aa4.13□□□□□ -1.75
PTPRD-205ENST00000397611 NBEAQ8NFP9 2946 aa4.13□□□□□ -1.75
PTPRD-205ENST00000397611 INSP01308 110 aa4.12□□□□□ -1.75
PTPRD-205ENST00000397611 RHOHQ15669 191 aa4.12□□□□□ -1.75
PTPRD-205ENST00000397611 RUSC1-AS1Q66K80 236 aa4.12□□□□□ -1.75
PTPRD-205ENST00000397611 NEXN-AS1Q8NBZ9 246 aa4.12□□□□□ -1.75
PTPRD-205ENST00000397611 ZNRF2Q8NHG8 242 aa4.12□□□□□ -1.75
PTPRD-205ENST00000397611 UBE2E2Q96LR5 201 aa4.12□□□□□ -1.75
PTPRD-205ENST00000397611 HTN3P15516 51 aa4.12□□□□□ -1.75
PTPRD-205ENST00000397611 POLR2KP53803 58 aaKnown RBP4.12□□□□□ -1.75
PTPRD-205ENST00000397611 SHISA2Q6UWI4 295 aa4.12□□□□□ -1.75
PTPRD-205ENST00000397611 POLQO75417 2590 aa4.12□□□□□ -1.75
PTPRD-205ENST00000397611 DSPP15924 2871 aaKnown RBP4.12□□□□□ -1.75
PTPRD-205ENST00000397611 TRBV27A0A0K0K1C4 114 aa4.12□□□□□ -1.75
PTPRD-205ENST00000397611 AJUBAQ96IF1 538 aa4.12□□□□□ -1.75
PTPRD-205ENST00000397611 CLPSL1A2RUU4 121 aa4.12□□□□□ -1.75
PTPRD-205ENST00000397611 KLLNB2CW77 178 aa4.12□□□□□ -1.75
PTPRD-205ENST00000397611 ZNF575Q86XF7 245 aa4.12□□□□□ -1.75
PTPRD-205ENST00000397611 TRBV7-3A0A075B6L6 115 aa4.12□□□□□ -1.75
PTPRD-205ENST00000397611 CCDC140Q96MF4 163 aa4.12□□□□□ -1.75
PTPRD-205ENST00000397611 TRIAP1O43715 76 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 CMC4P56277 68 aaPredicted RBP4.11□□□□□ -1.75
PTPRD-205ENST00000397611 SMAD5-AS1Q9Y6J3 95 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 CENPEQ02224 2701 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 CFHR3Q02985 330 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 SONP18583 2426 aaKnown RBP4.11□□□□□ -1.75
PTPRD-205ENST00000397611 SMIM9A6NGZ8 99 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 FLNCQ14315 2725 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 PPDPFQ9H3Y8 114 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 ATP5G1P05496 136 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 DEFB1P60022 68 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 IGHV7-4-1A0A0J9YVY3 117 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 A0A0J9YXY3 114 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 A0A0J9YY99 117 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 HRCT1Q6UXD1 115 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 TMEM61Q8N0U2 210 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 SAA4P35542 130 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 DEFB131AP59861 70 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 GPHB5Q86YW7 130 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 FAM19A4Q96LR4 140 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 KIF25-AS1Q9Y6Z4 181 aa4.11□□□□□ -1.75
PTPRD-205ENST00000397611 A0A0J9YX75 114 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 TRAV23DV6A0A075B6W5 121 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 H3BUX3 64 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 LECT2O14960 151 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 GAS8-AS1O95177 125 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 FAM236DA0A1B0GTK5 79 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 FAM236CP0DP71 79 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 CEMP1Q6PRD7 247 aaPredicted RBP4.1□□□□□ -1.75
PTPRD-205ENST00000397611 DSCR8Q96T75 97 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 C11orf21Q9P2W6 132 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 F5H768 121 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 LRRC75A-AS1Q8N1F1 130 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 DAD1P61803 113 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 C20orf197Q8N268 126 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 TRAV25A0A0B4J276 109 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 IGHV3-30P01768 117 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 IGHV3-30-3P0DP02 117 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 IGHV3-30-5P0DP03 117 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 Q6ZQT7 251 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 PYGO1Q9Y3Y4 419 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 A8MTW9 85 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 C5orf56Q8N8D9 126 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 WFDC11Q8NEX6 87 aa4.1□□□□□ -1.75
PTPRD-205ENST00000397611 LY6DQ14210 128 aa4.09□□□□□ -1.75
PTPRD-205ENST00000397611 XCL2Q9UBD3 114 aa4.09□□□□□ -1.75
PTPRD-205ENST00000397611 UBE2D3P61077 147 aa4.09□□□□□ -1.75
PTPRD-205ENST00000397611 UBE2D2P62837 147 aa4.09□□□□□ -1.75
PTPRD-205ENST00000397611 DAZ2Q13117 558 aaKnown RBP4.09□□□□□ -1.75
PTPRD-205ENST00000397611 SS18Q15532 418 aa4.09□□□□□ -1.75
PTPRD-205ENST00000397611 DAZ4Q86SG3 579 aaKnown RBP4.09□□□□□ -1.75
PTPRD-205ENST00000397611 SLC25A29Q8N8R3 303 aa4.09□□□□□ -1.75
PTPRD-205ENST00000397611 MPLKIPQ8TAP9 179 aa4.09□□□□□ -1.75
PTPRD-205ENST00000397611 SND1-IT1Q9HBX3 110 aa4.09□□□□□ -1.75
PTPRD-205ENST00000397611 DAZ3Q9NR90 486 aaKnown RBP4.09□□□□□ -1.75
PTPRD-205ENST00000397611 UNC80Q8N2C7 3258 aa4.09□□□□□ -1.75
PTPRD-205ENST00000397611 IGHV1-69P01742 117 aa4.09□□□□□ -1.75
PTPRD-205ENST00000397611 P0DMU3 169 aa4.09□□□□□ -1.75
PTPRD-205ENST00000397611 FAM231AP0DMU4 169 aa4.09□□□□□ -1.75
PTPRD-205ENST00000397611 FAM231CP0DMU5 169 aa4.09□□□□□ -1.75
PTPRD-205ENST00000397611 MIAQ16674 131 aa4.09□□□□□ -1.75
PTPRD-205ENST00000397611 NSUN5P1Q3KNT7 163 aa4.09□□□□□ -1.75
PTPRD-205ENST00000397611 C11orf44Q8N8P7 122 aa4.09□□□□□ -1.75
PTPRD-205ENST00000397611 VPREB3Q9UKI3 123 aa4.09□□□□□ -1.75
PTPRD-205ENST00000397611 LINC00315P59091 139 aa4.09□□□□□ -1.76
PTPRD-205ENST00000397611 SBSPONQ8IVN8 264 aa4.09□□□□□ -1.76
PTPRD-205ENST00000397611 PRO0461Q9UI25 63 aa4.09□□□□□ -1.76
PTPRD-205ENST00000397611 V9GYY9 64 aa4.09□□□□□ -1.76
PTPRD-205ENST00000397611 IGHV1-58A0A0C4DH39 117 aa4.08□□□□□ -1.76
PTPRD-205ENST00000397611 B4DSR2 109 aa4.08□□□□□ -1.76
PTPRD-205ENST00000397611 IGHV3-33P01772 117 aa4.08□□□□□ -1.76
PTPRD-205ENST00000397611 GNLYP22749 145 aa4.08□□□□□ -1.76
PTPRD-205ENST00000397611 ADORA2A-AS1P86434 159 aa4.08□□□□□ -1.76
PTPRD-205ENST00000397611 Q6ZS46 218 aa4.08□□□□□ -1.76
PTPRD-205ENST00000397611 CSDC2Q9Y534 153 aaKnown RBP4.08□□□□□ -1.76
PTPRD-205ENST00000397611 CDIP1Q9H305 208 aa4.08□□□□□ -1.76
PTPRD-205ENST00000397611 IGLV1-40P01703 118 aa4.08□□□□□ -1.76
PTPRD-205ENST00000397611 RPL35AP18077 110 aaKnown RBP4.08□□□□□ -1.76
PTPRD-205ENST00000397611 PRR30Q53SZ7 412 aaPredicted RBP4.08□□□□□ -1.76
PTPRD-205ENST00000397611 SORL1Q92673 2214 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms