RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 TRAV4A0A0B4J268 109 aa10.86□□□□□ -0.67
CCNF-202ENST00000397066 GATA3P23771 443 aa10.86□□□□□ -0.67
CCNF-202ENST00000397066 ZNF625Q96I27 306 aaPredicted RBP10.86□□□□□ -0.67
CCNF-202ENST00000397066 K7EQG2 157 aa10.86□□□□□ -0.67
CCNF-202ENST00000397066 IFITM1P13164 125 aa10.86□□□□□ -0.67
CCNF-202ENST00000397066 IGHV1-58A0A0C4DH39 117 aa10.85□□□□□ -0.67
CCNF-202ENST00000397066 PRM2P04554 102 aa10.85□□□□□ -0.67
CCNF-202ENST00000397066 ODF3Q96PU9 254 aa10.85□□□□□ -0.67
CCNF-202ENST00000397066 LINC01587Q99440 93 aa10.85□□□□□ -0.67
CCNF-202ENST00000397066 C10orf105Q8TEF2 133 aa10.85□□□□□ -0.67
CCNF-202ENST00000397066 Q6ZSV7 163 aa10.85□□□□□ -0.67
CCNF-202ENST00000397066 IGHV3OR16-12A0A075B7B8 117 aa10.84□□□□□ -0.67
CCNF-202ENST00000397066 TRBV30A0A0K0K1B3 111 aa10.84□□□□□ -0.67
CCNF-202ENST00000397066 EIF4EBP3O60516 100 aaPredicted RBP10.84□□□□□ -0.67
CCNF-202ENST00000397066 ADAMTSL4-AS1Q5T5F5 129 aa10.84□□□□□ -0.67
CCNF-202ENST00000397066 NACAE9PAV3 2078 aa10.83□□□□□ -0.68
CCNF-202ENST00000397066 B4DSR2 109 aa10.83□□□□□ -0.68
CCNF-202ENST00000397066 CRLF1O75462 422 aa10.83□□□□□ -0.68
CCNF-202ENST00000397066 DEFB112Q30KQ8 113 aa10.83□□□□□ -0.68
CCNF-202ENST00000397066 HOXD3P31249 432 aaPredicted RBP10.83□□□□□ -0.68
CCNF-202ENST00000397066 NDUFV3P56181 108 aaKnown RBP10.83□□□□□ -0.68
CCNF-202ENST00000397066 BRI3O95415 125 aa10.82□□□□□ -0.68
CCNF-202ENST00000397066 MEIG1Q5JSS6 88 aa10.82□□□□□ -0.68
CCNF-202ENST00000397066 PRRC2AP48634 2157 aaKnown RBP10.82□□□□□ -0.68
CCNF-202ENST00000397066 PSMB8P28062 276 aa10.82□□□□□ -0.68
CCNF-202ENST00000397066 MIAQ16674 131 aa10.82□□□□□ -0.68
CCNF-202ENST00000397066 SPTBN4Q9H254 2564 aa10.82□□□□□ -0.68
CCNF-202ENST00000397066 GAGE12JA6NER3 117 aa10.81□□□□□ -0.68
CCNF-202ENST00000397066 GAGE7O76087 117 aa10.81□□□□□ -0.68
CCNF-202ENST00000397066 GAGE12FP0CL80 117 aa10.81□□□□□ -0.68
CCNF-202ENST00000397066 GAGE12GP0CL81 117 aa10.81□□□□□ -0.68
CCNF-202ENST00000397066 GAGE12IP0CL82 117 aa10.81□□□□□ -0.68
CCNF-202ENST00000397066 ZNF415Q09FC8 603 aa10.81□□□□□ -0.68
CCNF-202ENST00000397066 GAGE4Q13068 117 aa10.81□□□□□ -0.68
CCNF-202ENST00000397066 VSIG2Q96IQ7 327 aa10.81□□□□□ -0.68
CCNF-202ENST00000397066 MRPS36P82909 103 aaKnown RBP10.81□□□□□ -0.68
CCNF-202ENST00000397066 PYGO1Q9Y3Y4 419 aa10.81□□□□□ -0.68
CCNF-202ENST00000397066 AVPP01185 164 aa10.8□□□□□ -0.68
CCNF-202ENST00000397066 DYNLRB2Q8TF09 96 aa10.8□□□□□ -0.68
CCNF-202ENST00000397066 DEFB136Q30KP8 78 aa10.8□□□□□ -0.68
CCNF-202ENST00000397066 SPANXA1Q9NS26 97 aa10.8□□□□□ -0.68
CCNF-202ENST00000397066 H7C423 109 aa10.8□□□□□ -0.68
CCNF-202ENST00000397066 MAPK1IP1LQ8NDC0 245 aa10.8□□□□□ -0.68
CCNF-202ENST00000397066 TINCRA0A1B0GVN0 87 aa10.79□□□□□ -0.68
CCNF-202ENST00000397066 CITED1Q99966 193 aa10.79□□□□□ -0.68
CCNF-202ENST00000397066 LINC00467Q9BRT7 94 aa10.78□□□□□ -0.68
CCNF-202ENST00000397066 CDKN2A-AS1Q9UH64 79 aa10.78□□□□□ -0.68
CCNF-202ENST00000397066 ABCA2Q9BZC7 2435 aa10.78□□□□□ -0.68
CCNF-202ENST00000397066 C2CD3Q4AC94 2353 aa10.78□□□□□ -0.68
CCNF-202ENST00000397066 Q9UF83 564 aa10.78□□□□□ -0.68
CCNF-202ENST00000397066 TRAV13-1A0A0B4J241 112 aa10.78□□□□□ -0.68
CCNF-202ENST00000397066 H3BT86 120 aa10.78□□□□□ -0.68
CCNF-202ENST00000397066 M0QXV9 152 aa10.78□□□□□ -0.68
CCNF-202ENST00000397066 CFHR3Q02985 330 aa10.78□□□□□ -0.68
CCNF-202ENST00000397066 SPANXDQ9BXN6 97 aa10.78□□□□□ -0.68
CCNF-202ENST00000397066 Q9H8V8 135 aa10.78□□□□□ -0.68
CCNF-202ENST00000397066 SPANXCQ9NY87 97 aa10.78□□□□□ -0.68
CCNF-202ENST00000397066 USP9YO00507 2555 aaPredicted RBP10.77□□□□□ -0.68
CCNF-202ENST00000397066 SLURP1P55000 103 aa10.77□□□□□ -0.69
CCNF-202ENST00000397066 TMEM61Q8N0U2 210 aa10.77□□□□□ -0.69
CCNF-202ENST00000397066 COL12A1Q99715 3063 aa10.77□□□□□ -0.69
CCNF-202ENST00000397066 CCDC179H3BU77 68 aa10.76□□□□□ -0.69
CCNF-202ENST00000397066 UBE2D4Q9Y2X8 147 aa10.76□□□□□ -0.69
CCNF-202ENST00000397066 RBMY1A1P0DJD3 496 aaKnown RBP10.76□□□□□ -0.69
CCNF-202ENST00000397066 RBMY1CP0DJD4 496 aa10.76□□□□□ -0.69
CCNF-202ENST00000397066 RBMY1FQ15415 496 aaKnown RBP10.76□□□□□ -0.69
CCNF-202ENST00000397066 Q6ZSN1 163 aa10.75□□□□□ -0.69
CCNF-202ENST00000397066 LITAFQ99732 161 aa10.75□□□□□ -0.69
CCNF-202ENST00000397066 PRIMA1Q86XR5 153 aa10.75□□□□□ -0.69
CCNF-202ENST00000397066 NRGNQ92686 78 aa10.75□□□□□ -0.69
CCNF-202ENST00000397066 CELSR1Q9NYQ6 3014 aa10.75□□□□□ -0.69
CCNF-202ENST00000397066 IGHV3-53P01767 116 aa10.75□□□□□ -0.69
CCNF-202ENST00000397066 XCL2Q9UBD3 114 aa10.74□□□□□ -0.69
CCNF-202ENST00000397066 LST1O00453 97 aa10.74□□□□□ -0.69
CCNF-202ENST00000397066 CHCHD7Q9BUK0 85 aa10.74□□□□□ -0.69
CCNF-202ENST00000397066 TRGV1A0A0A0MS02 117 aa10.73□□□□□ -0.69
CCNF-202ENST00000397066 COPS9Q8WXC6 57 aa10.73□□□□□ -0.69
CCNF-202ENST00000397066 UBE2E2Q96LR5 201 aa10.73□□□□□ -0.69
CCNF-202ENST00000397066 IGKV3OR2-268A0A0C4DH90 116 aa10.73□□□□□ -0.69
CCNF-202ENST00000397066 TMEM101Q96IK0 257 aa10.72□□□□□ -0.69
CCNF-202ENST00000397066 INSP01308 110 aa10.72□□□□□ -0.69
CCNF-202ENST00000397066 PEMTQ9UBM1 199 aa10.72□□□□□ -0.69
CCNF-202ENST00000397066 HERVK_113P63121 156 aa10.71□□□□□ -0.69
CCNF-202ENST00000397066 LINC01356Q8N9X3 169 aa10.71□□□□□ -0.69
CCNF-202ENST00000397066 MYO9AB2RTY4 2548 aa10.71□□□□□ -0.7
CCNF-202ENST00000397066 UBE2L6O14933 153 aa10.71□□□□□ -0.7
CCNF-202ENST00000397066 NHLRC4P0CG21 123 aaPredicted RBP10.71□□□□□ -0.7
CCNF-202ENST00000397066 TMEM89A2RUT3 159 aa10.7□□□□□ -0.7
CCNF-202ENST00000397066 LINC00308Q8TCZ7 52 aa10.7□□□□□ -0.7
CCNF-202ENST00000397066 CHCHD5Q9BSY4 110 aa10.7□□□□□ -0.7
CCNF-202ENST00000397066 TOMM7Q9P0U1 55 aa10.7□□□□□ -0.7
CCNF-202ENST00000397066 NDUFA1O15239 70 aa10.7□□□□□ -0.7
CCNF-202ENST00000397066 DNAJC30Q96LL9 226 aa10.7□□□□□ -0.7
CCNF-202ENST00000397066 VPREB3Q9UKI3 123 aa10.7□□□□□ -0.7
CCNF-202ENST00000397066 C18orf65Q6ZTR6 163 aa10.7□□□□□ -0.7
CCNF-202ENST00000397066 ACACBO00763 2458 aa10.7□□□□□ -0.7
CCNF-202ENST00000397066 USP9XQ93008 2570 aaPredicted RBP10.69□□□□□ -0.7
CCNF-202ENST00000397066 PIEZO1Q92508 2521 aa10.69□□□□□ -0.7
CCNF-202ENST00000397066 RPL36AP83881 106 aaKnown RBP10.69□□□□□ -0.7
CCNF-202ENST00000397066 C3orf56Q8N813 242 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms