RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 TRGV11A0A075B6L2 103 aa13.1□□□□□ -0.31
SREBF1-204ENST00000395756 PRSS29PA6NIE9 313 aa13.1□□□□□ -0.31
SREBF1-204ENST00000395756 FXYD2P54710 66 aa13.1□□□□□ -0.31
SREBF1-204ENST00000395756 ODF3L2Q3SX64 289 aa13.1□□□□□ -0.31
SREBF1-204ENST00000395756 OPRPNQ99935 248 aaPredicted RBP13.1□□□□□ -0.31
SREBF1-204ENST00000395756 TRBV20-1A0A075B6N2 111 aa13.1□□□□□ -0.31
SREBF1-204ENST00000395756 M0QXV9 152 aa13.1□□□□□ -0.31
SREBF1-204ENST00000395756 M0QY20 66 aa13.1□□□□□ -0.31
SREBF1-204ENST00000395756 MORN3Q6PF18 240 aaPredicted RBP13.1□□□□□ -0.31
SREBF1-204ENST00000395756 VCYO14598 125 aa13.1□□□□□ -0.31
SREBF1-204ENST00000395756 APOMO95445 188 aa13.1□□□□□ -0.31
SREBF1-204ENST00000395756 PPP1R17O96001 155 aa13.1□□□□□ -0.31
SREBF1-204ENST00000395756 Q6ZUT4 128 aa13.1□□□□□ -0.31
SREBF1-204ENST00000395756 STHQ8IWL8 128 aa13.1□□□□□ -0.31
SREBF1-204ENST00000395756 BAALCQ8WXS3 180 aa13.1□□□□□ -0.31
SREBF1-204ENST00000395756 TM2D2Q9BX73 214 aa13.1□□□□□ -0.31
SREBF1-204ENST00000395756 ZMAT4Q9H898 229 aa13.1□□□□□ -0.31
SREBF1-204ENST00000395756 NHP2Q9NX24 153 aaKnown RBP13.1□□□□□ -0.31
SREBF1-204ENST00000395756 POLR2KP53803 58 aaKnown RBP13.09□□□□□ -0.31
SREBF1-204ENST00000395756 FLNBO75369 2602 aaKnown RBP13.09□□□□□ -0.31
SREBF1-204ENST00000395756 GAGE13Q4V321 117 aa13.09□□□□□ -0.31
SREBF1-204ENST00000395756 CCDC179H3BU77 68 aa13.08□□□□□ -0.32
SREBF1-204ENST00000395756 H7C1H1 209 aa13.08□□□□□ -0.32
SREBF1-204ENST00000395756 PPDPFQ9H3Y8 114 aa13.08□□□□□ -0.32
SREBF1-204ENST00000395756 MAPKAPK5-AS1Q8N8E1 139 aa13.07□□□□□ -0.32
SREBF1-204ENST00000395756 F8VRH5 84 aa13.07□□□□□ -0.32
SREBF1-204ENST00000395756 RNASE1P07998 156 aaKnown RBP13.07□□□□□ -0.32
SREBF1-204ENST00000395756 NEXN-AS1Q8NBZ9 246 aa13.07□□□□□ -0.32
SREBF1-204ENST00000395756 FHL3Q13643 280 aa13.06□□□□□ -0.32
SREBF1-204ENST00000395756 POM121L12Q8N7R1 296 aa13.06□□□□□ -0.32
SREBF1-204ENST00000395756 NBEAL2Q6ZNJ1 2754 aa13.05□□□□□ -0.32
SREBF1-204ENST00000395756 TSHBP01222 138 aa13.05□□□□□ -0.32
SREBF1-204ENST00000395756 Q6ZSN1 163 aa13.05□□□□□ -0.32
SREBF1-204ENST00000395756 VWFP04275 2813 aa13.05□□□□□ -0.32
SREBF1-204ENST00000395756 C3orf56Q8N813 242 aa13.05□□□□□ -0.32
SREBF1-204ENST00000395756 RPL35AP18077 110 aaKnown RBP13.05□□□□□ -0.32
SREBF1-204ENST00000395756 LY6G6DO95868 133 aa13.04□□□□□ -0.32
SREBF1-204ENST00000395756 ZFAND6Q6FIF0 208 aa13.04□□□□□ -0.32
SREBF1-204ENST00000395756 INSP01308 110 aa13.04□□□□□ -0.32
SREBF1-204ENST00000395756 PLNP26678 52 aa13.04□□□□□ -0.32
SREBF1-204ENST00000395756 FOXI1Q12951 378 aa13.04□□□□□ -0.32
SREBF1-204ENST00000395756 IGHV3-38A0A0C4DH36 116 aa13.03□□□□□ -0.32
SREBF1-204ENST00000395756 NHLRC4P0CG21 123 aaPredicted RBP13.03□□□□□ -0.32
SREBF1-204ENST00000395756 TRPT1Q86TN4 253 aaKnown RBP13.03□□□□□ -0.32
SREBF1-204ENST00000395756 TRBV25-1A0A075B6N4 114 aa13.03□□□□□ -0.32
SREBF1-204ENST00000395756 TRBV27A0A0K0K1C4 114 aa13.02□□□□□ -0.32
SREBF1-204ENST00000395756 GAGE12JA6NER3 117 aa13.02□□□□□ -0.32
SREBF1-204ENST00000395756 GAGE7O76087 117 aa13.02□□□□□ -0.32
SREBF1-204ENST00000395756 IGHV3-53P01767 116 aa13.02□□□□□ -0.32
SREBF1-204ENST00000395756 GAGE12FP0CL80 117 aa13.02□□□□□ -0.32
SREBF1-204ENST00000395756 GAGE12GP0CL81 117 aa13.02□□□□□ -0.32
SREBF1-204ENST00000395756 GAGE12IP0CL82 117 aa13.02□□□□□ -0.32
SREBF1-204ENST00000395756 GAGE4Q13068 117 aa13.02□□□□□ -0.32
SREBF1-204ENST00000395756 M0R2P5 195 aa13.02□□□□□ -0.33
SREBF1-204ENST00000395756 HILS1P60008 231 aa13.02□□□□□ -0.33
SREBF1-204ENST00000395756 PHLDA1Q8WV24 401 aaPredicted RBP13.02□□□□□ -0.33
SREBF1-204ENST00000395756 ZNF415Q09FC8 603 aa13.02□□□□□ -0.33
SREBF1-204ENST00000395756 CEMP1Q6PRD7 247 aaPredicted RBP13.02□□□□□ -0.33
SREBF1-204ENST00000395756 HIVEP1P15822 2718 aa13.01□□□□□ -0.33
SREBF1-204ENST00000395756 RNASE13Q5GAN3 156 aaKnown RBP13.01□□□□□ -0.33
SREBF1-204ENST00000395756 IGIPA6NJ69 53 aa13.01□□□□□ -0.33
SREBF1-204ENST00000395756 CHAC1Q9BUX1 264 aa13.01□□□□□ -0.33
SREBF1-204ENST00000395756 ATRQ13535 2644 aa13.01□□□□□ -0.33
SREBF1-204ENST00000395756 TRAV12-1A0A0B4J245 112 aa13□□□□□ -0.33
SREBF1-204ENST00000395756 IGLL5B9A064 214 aa13□□□□□ -0.33
SREBF1-204ENST00000395756 INAFM1C9JVW0 142 aa13□□□□□ -0.33
SREBF1-204ENST00000395756 TRGV1A0A0A0MS02 117 aa13□□□□□ -0.33
SREBF1-204ENST00000395756 TRAV2A0A0B4J234 112 aa13□□□□□ -0.33
SREBF1-204ENST00000395756 TMEM170BQ5T4T1 132 aa13□□□□□ -0.33
SREBF1-204ENST00000395756 PTH2Q96A98 100 aa13□□□□□ -0.33
SREBF1-204ENST00000395756 C11orf86A6NJI1 115 aa12.99□□□□□ -0.33
SREBF1-204ENST00000395756 C1orf158Q8N1D5 194 aa12.99□□□□□ -0.33
SREBF1-204ENST00000395756 SFTA2Q6UW10 78 aa12.99□□□□□ -0.33
SREBF1-204ENST00000395756 NFE4Q86UQ8 179 aa12.99□□□□□ -0.33
SREBF1-204ENST00000395756 TENM1Q9UKZ4 2725 aa12.99□□□□□ -0.33
SREBF1-204ENST00000395756 I3L3M4 83 aa12.99□□□□□ -0.33
SREBF1-204ENST00000395756 CFAP126Q5VTH2 177 aa12.99□□□□□ -0.33
SREBF1-204ENST00000395756 IGHV3-64A0A075B6Q5 118 aa12.98□□□□□ -0.33
SREBF1-204ENST00000395756 C11orf72Q8NBR9 251 aa12.98□□□□□ -0.33
SREBF1-204ENST00000395756 TRBV6-5A0A0K0K1A5 114 aa12.98□□□□□ -0.33
SREBF1-204ENST00000395756 E9PLD3 99 aa12.98□□□□□ -0.33
SREBF1-204ENST00000395756 PRADC1Q9BSG0 188 aa12.98□□□□□ -0.33
SREBF1-204ENST00000395756 PMVKQ15126 192 aa12.97□□□□□ -0.33
SREBF1-204ENST00000395756 C16orf95Q9H693 158 aa12.97□□□□□ -0.33
SREBF1-204ENST00000395756 KRTAP10-3P60369 221 aa12.97□□□□□ -0.33
SREBF1-204ENST00000395756 NSD1Q96L73 2696 aaPredicted RBP12.97□□□□□ -0.33
SREBF1-204ENST00000395756 A8MTW9 85 aa12.97□□□□□ -0.33
SREBF1-204ENST00000395756 SPXQ9BT56 116 aa12.97□□□□□ -0.33
SREBF1-204ENST00000395756 A8MWV9 139 aa12.96□□□□□ -0.33
SREBF1-204ENST00000395756 PRO0461Q9UI25 63 aa12.96□□□□□ -0.33
SREBF1-204ENST00000395756 TRAV25A0A0B4J276 109 aa12.95□□□□□ -0.34
SREBF1-204ENST00000395756 ADARB2-AS1A8MUL3 147 aa12.95□□□□□ -0.34
SREBF1-204ENST00000395756 PF4P02776 101 aa12.95□□□□□ -0.34
SREBF1-204ENST00000395756 IGLV4-69A0A075B6H9 119 aa12.95□□□□□ -0.34
SREBF1-204ENST00000395756 ZNRF2Q8NHG8 242 aa12.95□□□□□ -0.34
SREBF1-204ENST00000395756 HIST1H4GQ99525 98 aa12.95□□□□□ -0.34
SREBF1-204ENST00000395756 Q6ZTI0 123 aa12.94□□□□□ -0.34
SREBF1-204ENST00000395756 C20orf203Q8NBC4 194 aa12.94□□□□□ -0.34
SREBF1-204ENST00000395756 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.94□□□□□ -0.34
SREBF1-204ENST00000395756 IGKV2-29A2NJV5 120 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms