RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 RPL35P42766 123 aaKnown RBP13.25□□□□□ -0.29
TRAF4-203ENST00000394925 AMTP48728 403 aa13.25□□□□□ -0.29
TRAF4-203ENST00000394925 KCNRGQ8N5I3 272 aa13.25□□□□□ -0.29
TRAF4-203ENST00000394925 LYPD6BQ8NI32 183 aa13.25□□□□□ -0.29
TRAF4-203ENST00000394925 PGLYRP4Q96LB8 373 aa13.25□□□□□ -0.29
TRAF4-203ENST00000394925 STPG4Q8N801 248 aa13.24□□□□□ -0.29
TRAF4-203ENST00000394925 OR2D3Q8NGH3 330 aa13.24□□□□□ -0.29
TRAF4-203ENST00000394925 NIT2Q9NQR4 276 aa13.24□□□□□ -0.29
TRAF4-203ENST00000394925 CACNG7P62955 275 aa13.23□□□□□ -0.29
TRAF4-203ENST00000394925 COTL1Q14019 142 aa13.23□□□□□ -0.29
TRAF4-203ENST00000394925 RPS20P60866 119 aaKnown RBP13.22□□□□□ -0.29
TRAF4-203ENST00000394925 A0A0J9YXV3 536 aa13.21□□□□□ -0.29
TRAF4-203ENST00000394925 UMAD1C9J7I0 102 aa13.21□□□□□ -0.29
TRAF4-203ENST00000394925 TRGC1P0CF51 173 aa13.2□□□□□ -0.3
TRAF4-203ENST00000394925 CENPWQ5EE01 88 aa13.2□□□□□ -0.3
TRAF4-203ENST00000394925 SMLR1H3BR10 107 aa13.19□□□□□ -0.3
TRAF4-203ENST00000394925 H2AFB1P0C5Y9 115 aa13.19□□□□□ -0.3
TRAF4-203ENST00000394925 KRTAP10-8P60410 259 aa13.19□□□□□ -0.3
TRAF4-203ENST00000394925 A0A096LNI7 61 aa13.18□□□□□ -0.3
TRAF4-203ENST00000394925 C19orf71A6NCJ1 209 aa13.18□□□□□ -0.3
TRAF4-203ENST00000394925 F2Z2F3 143 aa13.18□□□□□ -0.3
TRAF4-203ENST00000394925 LYZL1Q6UWQ5 148 aa13.18□□□□□ -0.3
TRAF4-203ENST00000394925 CHCHD10Q8WYQ3 142 aaPredicted RBP13.18□□□□□ -0.3
TRAF4-203ENST00000394925 NTF3P20783 257 aa13.17□□□□□ -0.3
TRAF4-203ENST00000394925 REG3GQ6UW15 175 aa13.17□□□□□ -0.3
TRAF4-203ENST00000394925 SPINK6Q6UWN8 80 aa13.17□□□□□ -0.3
TRAF4-203ENST00000394925 C11orf52Q96A22 123 aa13.17□□□□□ -0.3
TRAF4-203ENST00000394925 GVQW2A0A096LPI5 108 aaPredicted RBP13.16□□□□□ -0.3
TRAF4-203ENST00000394925 XKRY2A2RUG3 117 aa13.16□□□□□ -0.3
TRAF4-203ENST00000394925 AMMECR1LQ6DCA0 310 aa13.16□□□□□ -0.3
TRAF4-203ENST00000394925 GNG13Q9P2W3 67 aa13.16□□□□□ -0.3
TRAF4-203ENST00000394925 RAB19A4D1S5 217 aa13.15□□□□□ -0.3
TRAF4-203ENST00000394925 IFNA1P01562 189 aa13.15□□□□□ -0.3
TRAF4-203ENST00000394925 RNASEKQ6P5S7 137 aaKnown RBP13.15□□□□□ -0.3
TRAF4-203ENST00000394925 CCL20P78556 96 aa13.14□□□□□ -0.31
TRAF4-203ENST00000394925 MANBALQ9NQG1 85 aa13.14□□□□□ -0.31
TRAF4-203ENST00000394925 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.13□□□□□ -0.31
TRAF4-203ENST00000394925 TRAV26-2A0A0B4J265 109 aa13.13□□□□□ -0.31
TRAF4-203ENST00000394925 IGKV2-29A2NJV5 120 aaPredicted RBP13.13□□□□□ -0.31
TRAF4-203ENST00000394925 ZNF345Q14585 488 aa13.13□□□□□ -0.31
TRAF4-203ENST00000394925 GATD1Q8NB37 220 aa13.13□□□□□ -0.31
TRAF4-203ENST00000394925 GNG4P50150 75 aa13.12□□□□□ -0.31
TRAF4-203ENST00000394925 FOXI1Q12951 378 aa13.12□□□□□ -0.31
TRAF4-203ENST00000394925 Q6ZNX1 250 aa13.12□□□□□ -0.31
TRAF4-203ENST00000394925 LINC00474Q9P2X8 69 aa13.12□□□□□ -0.31
TRAF4-203ENST00000394925 SRSF9Q13242 221 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■■□□□ 13.7
TRAF4-203ENST00000394925 TWIST1Q15672 202 aa13.11□□□□□ -0.31
TRAF4-203ENST00000394925 C9orf62Q8N4C0 152 aa13.11□□□□□ -0.31
TRAF4-203ENST00000394925 LINC00526Q96FQ7 95 aa13.11□□□□□ -0.31
TRAF4-203ENST00000394925 FGF6P10767 208 aa13.1□□□□□ -0.31
TRAF4-203ENST00000394925 Q6ZRP5 223 aa13.1□□□□□ -0.31
TRAF4-203ENST00000394925 SMIM12Q96EX1 92 aa13.1□□□□□ -0.31
TRAF4-203ENST00000394925 KANTRA0A1W2PQU2 76 aa13.09□□□□□ -0.31
TRAF4-203ENST00000394925 BCL2L11O43521 198 aa13.09□□□□□ -0.31
TRAF4-203ENST00000394925 GAS8-AS1O95177 125 aa13.09□□□□□ -0.31
TRAF4-203ENST00000394925 CTRLP40313 264 aa13.09□□□□□ -0.31
TRAF4-203ENST00000394925 XCL1P47992 114 aa13.09□□□□□ -0.31
TRAF4-203ENST00000394925 RPL39LQ96EH5 51 aaKnown RBP13.09□□□□□ -0.31
TRAF4-203ENST00000394925 H7C423 109 aa13.08□□□□□ -0.32
TRAF4-203ENST00000394925 NCR2O95944 276 aa13.08□□□□□ -0.32
TRAF4-203ENST00000394925 APCSP02743 223 aa13.08□□□□□ -0.32
TRAF4-203ENST00000394925 CARD19Q96LW7 228 aa13.08□□□□□ -0.32
TRAF4-203ENST00000394925 PKIGQ9Y2B9 76 aa13.08□□□□□ -0.32
TRAF4-203ENST00000394925 TRBV20OR9-2A0A075B6H5 130 aa13.07□□□□□ -0.32
TRAF4-203ENST00000394925 NUDT10Q8NFP7 164 aa13.07□□□□□ -0.32
TRAF4-203ENST00000394925 OR5A1Q8NGJ0 315 aa13.07□□□□□ -0.32
TRAF4-203ENST00000394925 NUDT11Q96G61 164 aa13.07□□□□□ -0.32
TRAF4-203ENST00000394925 IGHV1-58A0A0C4DH39 117 aa13.06□□□□□ -0.32
TRAF4-203ENST00000394925 CCL25O15444 150 aa13.06□□□□□ -0.32
TRAF4-203ENST00000394925 CNFNQ9BYD5 112 aa13.06□□□□□ -0.32
TRAF4-203ENST00000394925 BIN3Q9NQY0 253 aa13.06□□□□□ -0.32
TRAF4-203ENST00000394925 MED9Q9NWA0 146 aa13.06□□□□□ -0.32
TRAF4-203ENST00000394925 TRAV1-1A0A0B4J248 108 aa13.05□□□□□ -0.32
TRAF4-203ENST00000394925 HMSDA8MTL9 139 aa13.05□□□□□ -0.32
TRAF4-203ENST00000394925 EIF5AP63241 154 aaKnown RBP13.05□□□□□ -0.32
TRAF4-203ENST00000394925 LINC00959A0A1B0GUT2 108 aa13.04□□□□□ -0.32
TRAF4-203ENST00000394925 SDHAF1A6NFY7 115 aa13.04□□□□□ -0.32
TRAF4-203ENST00000394925 ZNF25P17030 456 aaPredicted RBP13.04□□□□□ -0.32
TRAF4-203ENST00000394925 FOXA3P55318 350 aaPredicted RBP13.04□□□□□ -0.32
TRAF4-203ENST00000394925 MEF2BQ02080 365 aaPredicted RBP13.04□□□□□ -0.32
TRAF4-203ENST00000394925 BTF3L4Q96K17 158 aa13.04□□□□□ -0.32
TRAF4-203ENST00000394925 BATF3Q9NR55 127 aa13.04□□□□□ -0.32
TRAF4-203ENST00000394925 PDE6DO43924 150 aa13.03□□□□□ -0.32
TRAF4-203ENST00000394925 SYCNQ0VAF6 134 aa13.03□□□□□ -0.32
TRAF4-203ENST00000394925 TMEM101Q96IK0 257 aa13.03□□□□□ -0.32
TRAF4-203ENST00000394925 LPAP08519 4548 aa13.02□□□□□ -0.32
TRAF4-203ENST00000394925 PMCHP20382 165 aa13.02□□□□□ -0.33
TRAF4-203ENST00000394925 SMIM15Q7Z3B0 74 aa13.02□□□□□ -0.33
TRAF4-203ENST00000394925 FAM231BA6NCW3 169 aa13.01□□□□□ -0.33
TRAF4-203ENST00000394925 TEX46H3BTG2 121 aa13.01□□□□□ -0.33
TRAF4-203ENST00000394925 ZNF561-AS1K7EIQ3 104 aa13.01□□□□□ -0.33
TRAF4-203ENST00000394925 RNASE7Q9H1E1 156 aaKnown RBP13.01□□□□□ -0.33
TRAF4-203ENST00000394925 RPP21Q9H633 154 aaKnown RBP13.01□□□□□ -0.33
TRAF4-203ENST00000394925 I3L3M4 83 aa13□□□□□ -0.33
TRAF4-203ENST00000394925 PTTG1IPP53801 180 aa13□□□□□ -0.33
TRAF4-203ENST00000394925 GAGE2BQ13066 116 aa13□□□□□ -0.33
TRAF4-203ENST00000394925 RGS21Q2M5E4 152 aa13□□□□□ -0.33
TRAF4-203ENST00000394925 TEX261Q6UWH6 196 aa13□□□□□ -0.33
TRAF4-203ENST00000394925 SS18Q15532 418 aa12.99□□□□□ -0.33
TRAF4-203ENST00000394925 CD164L2Q6UWJ8 174 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms