RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 OPRPNQ99935 248 aaPredicted RBP13.47□□□□□ -0.25
SIL1-202ENST00000394817 NHP2Q9NX24 153 aaKnown RBP13.47□□□□□ -0.25
SIL1-202ENST00000394817 PYGO1Q9Y3Y4 419 aa13.47□□□□□ -0.25
SIL1-202ENST00000394817 A0A1W2PPM0 123 aa13.46□□□□□ -0.25
SIL1-202ENST00000394817 ADARB2-AS1A8MUL3 147 aa13.46□□□□□ -0.25
SIL1-202ENST00000394817 SAP30O75446 220 aa13.46□□□□□ -0.25
SIL1-202ENST00000394817 AZU1P20160 251 aa13.46□□□□□ -0.25
SIL1-202ENST00000394817 CMC4P56277 68 aaPredicted RBP13.46□□□□□ -0.25
SIL1-202ENST00000394817 GTF2H5Q6ZYL4 71 aa13.46□□□□□ -0.25
SIL1-202ENST00000394817 NAA38Q9BRA0 125 aaKnown RBP13.46□□□□□ -0.25
SIL1-202ENST00000394817 GAGE10A6NGK3 116 aa13.45□□□□□ -0.26
SIL1-202ENST00000394817 TMEM170BQ5T4T1 132 aa13.45□□□□□ -0.26
SIL1-202ENST00000394817 DNAJC30Q96LL9 226 aa13.45□□□□□ -0.26
SIL1-202ENST00000394817 FAM110AQ9BQ89 295 aa13.45□□□□□ -0.26
SIL1-202ENST00000394817 K7ERJ3 54 aa13.45□□□□□ -0.26
SIL1-202ENST00000394817 IGLV1-51P01701 117 aa13.45□□□□□ -0.26
SIL1-202ENST00000394817 RNASE8Q8TDE3 154 aaKnown RBP13.45□□□□□ -0.26
SIL1-202ENST00000394817 Q9UF83 564 aa13.45□□□□□ -0.26
SIL1-202ENST00000394817 K7EP34 96 aa13.44□□□□□ -0.26
SIL1-202ENST00000394817 FOSL1P15407 271 aa13.43□□□□□ -0.26
SIL1-202ENST00000394817 CRYBA4P53673 196 aa13.43□□□□□ -0.26
SIL1-202ENST00000394817 IGHV3OR16-12A0A075B7B8 117 aa13.43□□□□□ -0.26
SIL1-202ENST00000394817 KRTAP10-3P60369 221 aa13.43□□□□□ -0.26
SIL1-202ENST00000394817 SAMD5Q5TGI4 173 aa13.43□□□□□ -0.26
SIL1-202ENST00000394817 SCGB1D4Q6XE38 83 aa13.43□□□□□ -0.26
SIL1-202ENST00000394817 VCX2Q9H322 139 aa13.43□□□□□ -0.26
SIL1-202ENST00000394817 NIPBLQ6KC79 2804 aaeCLIP13.43□□□□□ -0.262e-8■□□□□ 11
SIL1-202ENST00000394817 C2CD3Q4AC94 2353 aa13.42□□□□□ -0.26
SIL1-202ENST00000394817 TSPEAR-AS2P59090 65 aa13.42□□□□□ -0.26
SIL1-202ENST00000394817 FAM104AQ969W3 186 aa13.42□□□□□ -0.26
SIL1-202ENST00000394817 PLEKHB2Q96CS7 222 aa13.42□□□□□ -0.26
SIL1-202ENST00000394817 AMELXQ99217 191 aa13.42□□□□□ -0.26
SIL1-202ENST00000394817 A0A1B0GWB2 263 aa13.41□□□□□ -0.26
SIL1-202ENST00000394817 TMEM263Q8WUH6 116 aaKnown RBP13.41□□□□□ -0.26
SIL1-202ENST00000394817 CHCHD7Q9BUK0 85 aa13.41□□□□□ -0.26
SIL1-202ENST00000394817 FABP2P12104 132 aa13.41□□□□□ -0.26
SIL1-202ENST00000394817 C12orf74Q32Q52 190 aa13.41□□□□□ -0.26
SIL1-202ENST00000394817 C19orf73Q9NVV2 129 aa13.41□□□□□ -0.26
SIL1-202ENST00000394817 TMEM223A0PJW6 202 aa13.4□□□□□ -0.26
SIL1-202ENST00000394817 ZNF22P17026 224 aaPredicted RBP13.4□□□□□ -0.26
SIL1-202ENST00000394817 TRGV1A0A0A0MS02 117 aa13.39□□□□□ -0.27
SIL1-202ENST00000394817 GAGE12BA1L429 117 aa13.39□□□□□ -0.27
SIL1-202ENST00000394817 GIG44P09565 113 aaPredicted RBP13.39□□□□□ -0.27
SIL1-202ENST00000394817 SPANXA1Q9NS26 97 aa13.39□□□□□ -0.27
SIL1-202ENST00000394817 SPCS1Q9Y6A9 102 aa13.39□□□□□ -0.27
SIL1-202ENST00000394817 A0A0J9YY99 117 aa13.39□□□□□ -0.27
SIL1-202ENST00000394817 J3QQQ9 107 aa13.39□□□□□ -0.27
SIL1-202ENST00000394817 CRLF1O75462 422 aa13.39□□□□□ -0.27
SIL1-202ENST00000394817 OR5A1Q8NGJ0 315 aa13.39□□□□□ -0.27
SIL1-202ENST00000394817 F8P00451 2351 aa13.38□□□□□ -0.27
SIL1-202ENST00000394817 A0A0J9YXV3 536 aa13.38□□□□□ -0.27
SIL1-202ENST00000394817 COTL1Q14019 142 aa13.38□□□□□ -0.27
SIL1-202ENST00000394817 UBE2D4Q9Y2X8 147 aa13.38□□□□□ -0.27
SIL1-202ENST00000394817 LEPROTO15243 131 aa13.37□□□□□ -0.27
SIL1-202ENST00000394817 MRPS36P82909 103 aaKnown RBP13.37□□□□□ -0.27
SIL1-202ENST00000394817 WFDC10AQ9H1F0 79 aa13.37□□□□□ -0.27
SIL1-202ENST00000394817 LGALS3P17931 250 aaKnown RBP13.37□□□□□ -0.27
SIL1-202ENST00000394817 SPANXB1Q9NS25 103 aaPredicted RBP13.37□□□□□ -0.27
SIL1-202ENST00000394817 TMEM238LA0A1B0GVL6 79 aa13.36□□□□□ -0.27
SIL1-202ENST00000394817 A6NJY4 79 aa13.36□□□□□ -0.27
SIL1-202ENST00000394817 IGLL5B9A064 214 aa13.36□□□□□ -0.27
SIL1-202ENST00000394817 CEMP1Q6PRD7 247 aaPredicted RBP13.36□□□□□ -0.27
SIL1-202ENST00000394817 Q6ZTI0 123 aa13.36□□□□□ -0.27
SIL1-202ENST00000394817 TRAV4A0A0B4J268 109 aa13.35□□□□□ -0.27
SIL1-202ENST00000394817 IGHV3-38A0A0C4DH36 116 aa13.35□□□□□ -0.27
SIL1-202ENST00000394817 SRSF9Q13242 221 aaKnown RBP eCLIP13.35□□□□□ -0.27
SIL1-202ENST00000394817 NDUFA11Q86Y39 141 aa13.35□□□□□ -0.27
SIL1-202ENST00000394817 JMJD1CQ15652 2540 aa13.35□□□□□ -0.27
SIL1-202ENST00000394817 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.35□□□□□ -0.27
SIL1-202ENST00000394817 IGKV2-29A2NJV5 120 aaPredicted RBP13.35□□□□□ -0.27
SIL1-202ENST00000394817 DAZ2Q13117 558 aaKnown RBP13.35□□□□□ -0.27
SIL1-202ENST00000394817 ZNF479Q96JC4 524 aa13.35□□□□□ -0.27
SIL1-202ENST00000394817 TRBV10-1A0A0K0K1A3 114 aa13.34□□□□□ -0.27
SIL1-202ENST00000394817 SLC25A29Q8N8R3 303 aa13.34□□□□□ -0.27
SIL1-202ENST00000394817 C16orf74Q96GX8 76 aa13.34□□□□□ -0.27
SIL1-202ENST00000394817 C1QTNF4Q9BXJ3 329 aa13.34□□□□□ -0.27
SIL1-202ENST00000394817 K7EQD1 137 aa13.33□□□□□ -0.28
SIL1-202ENST00000394817 PLAC8L1A1L4L8 177 aa13.33□□□□□ -0.28
SIL1-202ENST00000394817 UBE2D1P51668 147 aa13.33□□□□□ -0.28
SIL1-202ENST00000394817 CSNK1G2-AS1Q8NCQ2 148 aa13.33□□□□□ -0.28
SIL1-202ENST00000394817 TENM1Q9UKZ4 2725 aa13.32□□□□□ -0.28
SIL1-202ENST00000394817 RPL35AP18077 110 aaKnown RBP13.32□□□□□ -0.28
SIL1-202ENST00000394817 RRN3P1Q2M238 152 aa13.32□□□□□ -0.28
SIL1-202ENST00000394817 Q6ZUT4 128 aa13.32□□□□□ -0.28
SIL1-202ENST00000394817 BAHCC1Q9P281 2608 aa13.32□□□□□ -0.28
SIL1-202ENST00000394817 TINCRA0A1B0GVN0 87 aa13.31□□□□□ -0.28
SIL1-202ENST00000394817 RNASE13Q5GAN3 156 aaKnown RBP13.31□□□□□ -0.28
SIL1-202ENST00000394817 TIMM21Q9BVV7 248 aa13.31□□□□□ -0.28
SIL1-202ENST00000394817 NOP10Q9NPE3 64 aaKnown RBP13.31□□□□□ -0.28
SIL1-202ENST00000394817 IGHV3-30P01768 117 aa13.31□□□□□ -0.28
SIL1-202ENST00000394817 IGHV3-30-5P0DP03 117 aa13.31□□□□□ -0.28
SIL1-202ENST00000394817 RPL36AP83881 106 aaKnown RBP13.31□□□□□ -0.28
SIL1-202ENST00000394817 RPL36ALQ969Q0 106 aaKnown RBP13.31□□□□□ -0.28
SIL1-202ENST00000394817 OCIAD2Q56VL3 154 aa13.3□□□□□ -0.28
SIL1-202ENST00000394817 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.3□□□□□ -0.28
SIL1-202ENST00000394817 IGHV3-64A0A075B6Q5 118 aa13.29□□□□□ -0.28
SIL1-202ENST00000394817 LINC00482Q8N8I6 264 aa13.29□□□□□ -0.28
SIL1-202ENST00000394817 PF4P02776 101 aa13.29□□□□□ -0.28
SIL1-202ENST00000394817 RBX1P62877 108 aa13.29□□□□□ -0.28
SIL1-202ENST00000394817 DAZ4Q86SG3 579 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 180.2 ms