RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 UBE2WQ96B02 151 aa7.36□□□□□ -1.23
UBE2D3-208ENST00000394803 BBC3Q96PG8 261 aaPredicted RBP7.36□□□□□ -1.23
UBE2D3-208ENST00000394803 ABCA2Q9BZC7 2435 aa7.36□□□□□ -1.23
UBE2D3-208ENST00000394803 LITAFQ99732 161 aa7.36□□□□□ -1.23
UBE2D3-208ENST00000394803 UBE2D4Q9Y2X8 147 aa7.36□□□□□ -1.23
UBE2D3-208ENST00000394803 COL12A1Q99715 3063 aa7.36□□□□□ -1.23
UBE2D3-208ENST00000394803 TIRAPP58753 221 aa7.35□□□□□ -1.23
UBE2D3-208ENST00000394803 FHL3Q13643 280 aa7.35□□□□□ -1.23
UBE2D3-208ENST00000394803 NTN5Q8WTR8 489 aaPredicted RBP7.35□□□□□ -1.23
UBE2D3-208ENST00000394803 ANAPC13Q9BS18 74 aa7.35□□□□□ -1.23
UBE2D3-208ENST00000394803 MED13LQ71F56 2210 aa7.35□□□□□ -1.23
UBE2D3-208ENST00000394803 TRIAP1O43715 76 aa7.35□□□□□ -1.23
UBE2D3-208ENST00000394803 GAGE2BQ13066 116 aa7.35□□□□□ -1.23
UBE2D3-208ENST00000394803 GAGE2EQ4V326 116 aa7.35□□□□□ -1.23
UBE2D3-208ENST00000394803 C2orf82Q6UX34 121 aa7.35□□□□□ -1.23
UBE2D3-208ENST00000394803 GAGE2DQ9UEU5 116 aa7.35□□□□□ -1.23
UBE2D3-208ENST00000394803 SPTBN1Q01082 2364 aaKnown RBP7.35□□□□□ -1.23
UBE2D3-208ENST00000394803 AVPP01185 164 aa7.34□□□□□ -1.23
UBE2D3-208ENST00000394803 IGHV3-53P01767 116 aa7.34□□□□□ -1.23
UBE2D3-208ENST00000394803 DEFB131AP59861 70 aa7.34□□□□□ -1.23
UBE2D3-208ENST00000394803 CITED1Q99966 193 aa7.34□□□□□ -1.23
UBE2D3-208ENST00000394803 CHCHD7Q9BUK0 85 aa7.34□□□□□ -1.23
UBE2D3-208ENST00000394803 HIVEP3Q5T1R4 2406 aa7.34□□□□□ -1.24
UBE2D3-208ENST00000394803 FAM240AA0A1B0GVK7 77 aa7.33□□□□□ -1.24
UBE2D3-208ENST00000394803 NDUFA1O15239 70 aa7.33□□□□□ -1.24
UBE2D3-208ENST00000394803 EIF4EBP3O60516 100 aaPredicted RBP7.33□□□□□ -1.24
UBE2D3-208ENST00000394803 INSP01308 110 aa7.33□□□□□ -1.24
UBE2D3-208ENST00000394803 HERVK_113P63121 156 aa7.33□□□□□ -1.24
UBE2D3-208ENST00000394803 DGAT2L7PQ6IED9 249 aa7.33□□□□□ -1.24
UBE2D3-208ENST00000394803 CLUHP3Q96NS8 147 aa7.33□□□□□ -1.24
UBE2D3-208ENST00000394803 IGLV5-45A0A087WSX0 123 aa7.33□□□□□ -1.24
UBE2D3-208ENST00000394803 BEAN1Q3B7T3 259 aa7.33□□□□□ -1.24
UBE2D3-208ENST00000394803 TMEM61Q8N0U2 210 aa7.33□□□□□ -1.24
UBE2D3-208ENST00000394803 TRAV26-1A0A087WT03 109 aa7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 KNCNA6PVL3 124 aa7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 HTN1P15515 57 aa7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 Q6YL49 198 aa7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 PPDPFQ9H3Y8 114 aa7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 BEX4Q9NWD9 120 aaPredicted RBP7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 TRAV8-3A0A0A6YYJ7 113 aa7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 IGHV3-73A0A0B4J1V6 119 aa7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 LST1O00453 97 aa7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 RS1O15537 224 aa7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 RBMY1A1P0DJD3 496 aaKnown RBP7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 RBMY1CP0DJD4 496 aa7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 RBMY1FQ15415 496 aaKnown RBP7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 TTC32Q5I0X7 151 aa7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 LINC01587Q99440 93 aa7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 ZNF702PQ9H963 129 aa7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 CHD6Q8TD26 2715 aa7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 KMT2BQ9UMN6 2715 aaPredicted RBP7.32□□□□□ -1.24
UBE2D3-208ENST00000394803 C10orf99Q6UWK7 81 aa7.31□□□□□ -1.24
UBE2D3-208ENST00000394803 DYNLRB2Q8TF09 96 aa7.31□□□□□ -1.24
UBE2D3-208ENST00000394803 FAM104AQ969W3 186 aa7.31□□□□□ -1.24
UBE2D3-208ENST00000394803 ACYP1P07311 99 aa7.31□□□□□ -1.24
UBE2D3-208ENST00000394803 FAM19A3Q7Z5A8 133 aa7.31□□□□□ -1.24
UBE2D3-208ENST00000394803 ADARB2-AS1A8MUL3 147 aa7.3□□□□□ -1.24
UBE2D3-208ENST00000394803 GAGE5Q13069 117 aa7.3□□□□□ -1.24
UBE2D3-208ENST00000394803 GAGE6Q13070 117 aa7.3□□□□□ -1.24
UBE2D3-208ENST00000394803 DEFB121Q5J5C9 76 aa7.3□□□□□ -1.24
UBE2D3-208ENST00000394803 C4orf3Q8WVX3 66 aa7.3□□□□□ -1.24
UBE2D3-208ENST00000394803 CSDC2Q9Y534 153 aaKnown RBP7.3□□□□□ -1.24
UBE2D3-208ENST00000394803 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.29□□□□□ -1.24
UBE2D3-208ENST00000394803 TRBV10-1A0A0K0K1A3 114 aa7.29□□□□□ -1.24
UBE2D3-208ENST00000394803 IGKV2-29A2NJV5 120 aaPredicted RBP7.29□□□□□ -1.24
UBE2D3-208ENST00000394803 H7C423 109 aa7.29□□□□□ -1.24
UBE2D3-208ENST00000394803 HERV-K104P63124 156 aa7.29□□□□□ -1.24
UBE2D3-208ENST00000394803 ADAMTSL4-AS1Q5T5F5 129 aa7.29□□□□□ -1.24
UBE2D3-208ENST00000394803 MAP6D1Q9H9H5 199 aa7.29□□□□□ -1.24
UBE2D3-208ENST00000394803 TRAV25A0A0B4J276 109 aa7.29□□□□□ -1.24
UBE2D3-208ENST00000394803 FSHBP01225 129 aa7.29□□□□□ -1.24
UBE2D3-208ENST00000394803 CEMP1Q6PRD7 247 aaPredicted RBP7.29□□□□□ -1.24
UBE2D3-208ENST00000394803 Q8N2B8 174 aa7.29□□□□□ -1.24
UBE2D3-208ENST00000394803 C11orf72Q8NBR9 251 aa7.29□□□□□ -1.24
UBE2D3-208ENST00000394803 ZNF462Q96JM2 2506 aa7.29□□□□□ -1.24
UBE2D3-208ENST00000394803 IGLV5-39A0A0G2JS06 123 aa7.28□□□□□ -1.24
UBE2D3-208ENST00000394803 TEX49A0A1B0GTD5 131 aa7.28□□□□□ -1.24
UBE2D3-208ENST00000394803 PROK1P58294 105 aa7.28□□□□□ -1.24
UBE2D3-208ENST00000394803 RPL36AP83881 106 aaKnown RBP7.28□□□□□ -1.24
UBE2D3-208ENST00000394803 RPL36ALQ969Q0 106 aaKnown RBP7.28□□□□□ -1.24
UBE2D3-208ENST00000394803 PRRC2AP48634 2157 aaKnown RBP7.28□□□□□ -1.24
UBE2D3-208ENST00000394803 SLURP1P55000 103 aa7.28□□□□□ -1.24
UBE2D3-208ENST00000394803 DAZ2Q13117 558 aaKnown RBP7.28□□□□□ -1.24
UBE2D3-208ENST00000394803 DAZ4Q86SG3 579 aaKnown RBP7.28□□□□□ -1.24
UBE2D3-208ENST00000394803 TMEM101Q96IK0 257 aa7.28□□□□□ -1.24
UBE2D3-208ENST00000394803 DAZ3Q9NR90 486 aaKnown RBP7.28□□□□□ -1.24
UBE2D3-208ENST00000394803 CDKN2A-AS1Q9UH64 79 aa7.28□□□□□ -1.24
UBE2D3-208ENST00000394803 FLNCQ14315 2725 aa7.27□□□□□ -1.24
UBE2D3-208ENST00000394803 RBMY1BA6NDE4 496 aaKnown RBP7.27□□□□□ -1.25
UBE2D3-208ENST00000394803 RBMY1EA6NEQ0 496 aaKnown RBP7.27□□□□□ -1.25
UBE2D3-208ENST00000394803 RBMY1DP0C7P1 496 aaKnown RBP7.27□□□□□ -1.25
UBE2D3-208ENST00000394803 NDUFV3P56181 108 aaKnown RBP7.27□□□□□ -1.25
UBE2D3-208ENST00000394803 RNASE13Q5GAN3 156 aaKnown RBP7.27□□□□□ -1.25
UBE2D3-208ENST00000394803 C15orf53Q8NAA6 179 aa7.27□□□□□ -1.25
UBE2D3-208ENST00000394803 UTP20O75691 2785 aaKnown RBP7.27□□□□□ -1.25
UBE2D3-208ENST00000394803 CMC4P56277 68 aaPredicted RBP7.27□□□□□ -1.25
UBE2D3-208ENST00000394803 A0A096LNT2 108 aa7.26□□□□□ -1.25
UBE2D3-208ENST00000394803 COX7A2LO14548 114 aa7.26□□□□□ -1.25
UBE2D3-208ENST00000394803 PF4P02776 101 aa7.26□□□□□ -1.25
UBE2D3-208ENST00000394803 LINC00308Q8TCZ7 52 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 366.9 ms