RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 DAZ2Q13117 558 aaKnown RBP10.3□□□□□ -0.76
MKS1-203ENST00000393120 FAM104AQ969W3 186 aa10.3□□□□□ -0.76
MKS1-203ENST00000393120 ACANP16112 2415 aa10.29□□□□□ -0.76
MKS1-203ENST00000393120 IGHV3OR16-12A0A075B7B8 117 aa10.29□□□□□ -0.76
MKS1-203ENST00000393120 H3BUT2 72 aa10.29□□□□□ -0.76
MKS1-203ENST00000393120 C1QTNF4Q9BXJ3 329 aa10.29□□□□□ -0.76
MKS1-203ENST00000393120 TRGV1A0A0A0MS02 117 aa10.29□□□□□ -0.76
MKS1-203ENST00000393120 GTF2H5Q6ZYL4 71 aa10.29□□□□□ -0.76
MKS1-203ENST00000393120 RAB37Q96AX2 223 aa10.29□□□□□ -0.76
MKS1-203ENST00000393120 ITPR2Q14571 2701 aa10.28□□□□□ -0.76
MKS1-203ENST00000393120 TRBV10-1A0A0K0K1A3 114 aa10.28□□□□□ -0.76
MKS1-203ENST00000393120 A0A1B0GWB2 263 aa10.28□□□□□ -0.76
MKS1-203ENST00000393120 A0A1W2PPM0 123 aa10.28□□□□□ -0.76
MKS1-203ENST00000393120 TMEM223A0PJW6 202 aa10.28□□□□□ -0.76
MKS1-203ENST00000393120 GAGE10A6NGK3 116 aa10.28□□□□□ -0.76
MKS1-203ENST00000393120 KRTAP10-3P60369 221 aa10.28□□□□□ -0.76
MKS1-203ENST00000393120 NACAE9PAV3 2078 aa10.28□□□□□ -0.76
MKS1-203ENST00000393120 TRAV4A0A0B4J268 109 aa10.27□□□□□ -0.76
MKS1-203ENST00000393120 MRPS36P82909 103 aaKnown RBP10.27□□□□□ -0.76
MKS1-203ENST00000393120 COTL1Q14019 142 aa10.27□□□□□ -0.76
MKS1-203ENST00000393120 CSNK1G2-AS1Q8NCQ2 148 aa10.27□□□□□ -0.76
MKS1-203ENST00000393120 C16orf74Q96GX8 76 aa10.27□□□□□ -0.76
MKS1-203ENST00000393120 NHP2Q9NX24 153 aaKnown RBP10.27□□□□□ -0.76
MKS1-203ENST00000393120 UBE2D4Q9Y2X8 147 aa10.27□□□□□ -0.76
MKS1-203ENST00000393120 K7EP34 96 aa10.27□□□□□ -0.77
MKS1-203ENST00000393120 LEPROTO15243 131 aa10.27□□□□□ -0.77
MKS1-203ENST00000393120 ZNF22P17026 224 aaPredicted RBP10.27□□□□□ -0.77
MKS1-203ENST00000393120 SCGB1D4Q6XE38 83 aa10.27□□□□□ -0.77
MKS1-203ENST00000393120 A0A0J9YXV3 536 aa10.26□□□□□ -0.77
MKS1-203ENST00000393120 J3QQQ9 107 aa10.26□□□□□ -0.77
MKS1-203ENST00000393120 CIDEAO60543 219 aa10.26□□□□□ -0.77
MKS1-203ENST00000393120 C12orf74Q32Q52 190 aa10.26□□□□□ -0.77
MKS1-203ENST00000393120 SAMD5Q5TGI4 173 aa10.26□□□□□ -0.77
MKS1-203ENST00000393120 LINC00482Q8N8I6 264 aa10.26□□□□□ -0.77
MKS1-203ENST00000393120 OR5A1Q8NGJ0 315 aa10.26□□□□□ -0.77
MKS1-203ENST00000393120 PLEKHB2Q96CS7 222 aa10.26□□□□□ -0.77
MKS1-203ENST00000393120 TIMM21Q9BVV7 248 aa10.26□□□□□ -0.77
MKS1-203ENST00000393120 A0A0J9YY99 117 aa10.25□□□□□ -0.77
MKS1-203ENST00000393120 PLAC8L1A1L4L8 177 aa10.25□□□□□ -0.77
MKS1-203ENST00000393120 TSPEAR-AS2P59090 65 aa10.25□□□□□ -0.77
MKS1-203ENST00000393120 Q6ZTI0 123 aa10.25□□□□□ -0.77
MKS1-203ENST00000393120 ZNF479Q96JC4 524 aa10.25□□□□□ -0.77
MKS1-203ENST00000393120 OVOL2Q9BRP0 275 aa10.25□□□□□ -0.77
MKS1-203ENST00000393120 SPANXB1Q9NS25 103 aaPredicted RBP10.25□□□□□ -0.77
MKS1-203ENST00000393120 ANK3Q12955 4377 aaKnown RBP10.25□□□□□ -0.77
MKS1-203ENST00000393120 K7ERJ3 54 aa10.25□□□□□ -0.77
MKS1-203ENST00000393120 FABP2P12104 132 aa10.25□□□□□ -0.77
MKS1-203ENST00000393120 WFDC10AQ9H1F0 79 aa10.25□□□□□ -0.77
MKS1-203ENST00000393120 RPL35AP18077 110 aaKnown RBP10.24□□□□□ -0.77
MKS1-203ENST00000393120 SLC25A29Q8N8R3 303 aa10.24□□□□□ -0.77
MKS1-203ENST00000393120 NF1P21359 2839 aa10.24□□□□□ -0.77
MKS1-203ENST00000393120 HIVEP2P31629 2446 aa10.23□□□□□ -0.77
MKS1-203ENST00000393120 K7EQD1 137 aa10.23□□□□□ -0.77
MKS1-203ENST00000393120 PF4P02776 101 aa10.23□□□□□ -0.77
MKS1-203ENST00000393120 LGALS3P17931 250 aaKnown RBP10.23□□□□□ -0.77
MKS1-203ENST00000393120 RPL36AP83881 106 aaKnown RBP10.23□□□□□ -0.77
MKS1-203ENST00000393120 DAZ4Q86SG3 579 aaKnown RBP10.23□□□□□ -0.77
MKS1-203ENST00000393120 RPL36ALQ969Q0 106 aaKnown RBP10.23□□□□□ -0.77
MKS1-203ENST00000393120 NAA38Q9BRA0 125 aaKnown RBP10.23□□□□□ -0.77
MKS1-203ENST00000393120 NOP10Q9NPE3 64 aaKnown RBP10.23□□□□□ -0.77
MKS1-203ENST00000393120 DAZ3Q9NR90 486 aaKnown RBP10.23□□□□□ -0.77
MKS1-203ENST00000393120 TMEM238LA0A1B0GVL6 79 aa10.23□□□□□ -0.77
MKS1-203ENST00000393120 TINCRA0A1B0GVN0 87 aa10.23□□□□□ -0.77
MKS1-203ENST00000393120 A6NJY4 79 aa10.23□□□□□ -0.77
MKS1-203ENST00000393120 IGLL5B9A064 214 aa10.23□□□□□ -0.77
MKS1-203ENST00000393120 SRSF9Q13242 221 aaKnown RBP eCLIP10.23□□□□□ -0.77
MKS1-203ENST00000393120 CEMP1Q6PRD7 247 aaPredicted RBP10.23□□□□□ -0.77
MKS1-203ENST00000393120 SVIPQ8NHG7 77 aa10.23□□□□□ -0.77
MKS1-203ENST00000393120 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.22□□□□□ -0.77
MKS1-203ENST00000393120 IGHV3-38A0A0C4DH36 116 aa10.22□□□□□ -0.77
MKS1-203ENST00000393120 GAGE12BA1L429 117 aa10.22□□□□□ -0.77
MKS1-203ENST00000393120 IGKV2-29A2NJV5 120 aaPredicted RBP10.22□□□□□ -0.77
MKS1-203ENST00000393120 RRN3P1Q2M238 152 aa10.22□□□□□ -0.77
MKS1-203ENST00000393120 SPCS1Q9Y6A9 102 aa10.22□□□□□ -0.77
MKS1-203ENST00000393120 WNK1Q9H4A3 2382 aa10.22□□□□□ -0.77
MKS1-203ENST00000393120 MTORP42345 2549 aa10.22□□□□□ -0.77
MKS1-203ENST00000393120 INSL3P51460 131 aa10.21□□□□□ -0.77
MKS1-203ENST00000393120 FASNP49327 2511 aaKnown RBP10.21□□□□□ -0.77
MKS1-203ENST00000393120 INAFM1C9JVW0 142 aa10.21□□□□□ -0.78
MKS1-203ENST00000393120 UBE2D1P51668 147 aa10.21□□□□□ -0.78
MKS1-203ENST00000393120 UBE2D3P61077 147 aa10.21□□□□□ -0.78
MKS1-203ENST00000393120 UBE2D2P62837 147 aa10.21□□□□□ -0.78
MKS1-203ENST00000393120 CSDC2Q9Y534 153 aaKnown RBP10.21□□□□□ -0.78
MKS1-203ENST00000393120 CUBNO60494 3623 aa10.19□□□□□ -0.78
MKS1-203ENST00000393120 Q6ZUT4 128 aa10.19□□□□□ -0.78
MKS1-203ENST00000393120 TRBV6-4A0A1B0GX49 114 aa10.19□□□□□ -0.78
MKS1-203ENST00000393120 IGHV3-30P01768 117 aa10.19□□□□□ -0.78
MKS1-203ENST00000393120 IGHV3-30-5P0DP03 117 aa10.19□□□□□ -0.78
MKS1-203ENST00000393120 TIRAPP58753 221 aa10.19□□□□□ -0.78
MKS1-203ENST00000393120 GTSF1LQ9H1H1 148 aa10.19□□□□□ -0.78
MKS1-203ENST00000393120 IGHV1-58A0A0C4DH39 117 aa10.18□□□□□ -0.78
MKS1-203ENST00000393120 IGHV3-30-3P0DP02 117 aa10.18□□□□□ -0.78
MKS1-203ENST00000393120 SMAGPQ0VAQ4 97 aa10.18□□□□□ -0.78
MKS1-203ENST00000393120 TRGV2A0A075B6R0 118 aa10.17□□□□□ -0.78
MKS1-203ENST00000393120 IGLV5-45A0A087WSX0 123 aa10.17□□□□□ -0.78
MKS1-203ENST00000393120 GAGE7O76087 117 aa10.17□□□□□ -0.78
MKS1-203ENST00000393120 GAGE12FP0CL80 117 aa10.17□□□□□ -0.78
MKS1-203ENST00000393120 GAGE12GP0CL81 117 aa10.17□□□□□ -0.78
MKS1-203ENST00000393120 GAGE12IP0CL82 117 aa10.17□□□□□ -0.78
MKS1-203ENST00000393120 RNASE13Q5GAN3 156 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms