RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 MYH13Q9UKX3 1938 aa-1.91□□□□□ -2.72
SNORA40.4-201ENST00000390971 ARHGEF10O15013 1369 aa-1.92□□□□□ -2.72
SNORA40.4-201ENST00000390971 K7EQZ3 153 aa-1.92□□□□□ -2.72
SNORA40.4-201ENST00000390971 TP53AIP1Q9HCN2 124 aa-1.92□□□□□ -2.72
SNORA40.4-201ENST00000390971 OVOS2A0A0J9YW53 1432 aa-1.92□□□□□ -2.72
SNORA40.4-201ENST00000390971 OVOS2Q6IE36 1432 aa-1.92□□□□□ -2.72
SNORA40.4-201ENST00000390971 FAM236AA0A1B0GUQ0 79 aa-1.93□□□□□ -2.72
SNORA40.4-201ENST00000390971 FAM236BA0A1B0GV22 79 aa-1.93□□□□□ -2.72
SNORA40.4-201ENST00000390971 PIPP12273 146 aaPredicted RBP-1.93□□□□□ -2.72
SNORA40.4-201ENST00000390971 DCDP81605 110 aaKnown RBP-1.93□□□□□ -2.72
SNORA40.4-201ENST00000390971 TMEM2Q9UHN6 1383 aa-1.94□□□□□ -2.72
SNORA40.4-201ENST00000390971 H0YJX3 145 aa-1.94□□□□□ -2.72
SNORA40.4-201ENST00000390971 SPTSSBQ8NFR3 76 aa-1.94□□□□□ -2.72
SNORA40.4-201ENST00000390971 ADGRB1O14514 1584 aa-1.94□□□□□ -2.72
SNORA40.4-201ENST00000390971 LRP6O75581 1613 aa-1.95□□□□□ -2.72
SNORA40.4-201ENST00000390971 LAMC1P11047 1609 aa-1.95□□□□□ -2.72
SNORA40.4-201ENST00000390971 DOPEY1Q5JWR5 2465 aa-1.95□□□□□ -2.72
SNORA40.4-201ENST00000390971 IL5P05113 134 aa-1.95□□□□□ -2.72
SNORA40.4-201ENST00000390971 PSMG3Q9BT73 122 aaPredicted RBP-1.95□□□□□ -2.72
SNORA40.4-201ENST00000390971 CHD8Q9HCK8 2581 aa-1.96□□□□□ -2.72
SNORA40.4-201ENST00000390971 ERCC6L2Q5T890 1561 aa-1.96□□□□□ -2.72
SNORA40.4-201ENST00000390971 FXYD6-FXYD2A0A087WZ82 144 aa-1.96□□□□□ -2.72
SNORA40.4-201ENST00000390971 CBLN1P23435 193 aa-1.96□□□□□ -2.72
SNORA40.4-201ENST00000390971 CCL18P55774 89 aa-1.96□□□□□ -2.72
SNORA40.4-201ENST00000390971 LINC00312Q9Y6C7 94 aa-1.96□□□□□ -2.72
SNORA40.4-201ENST00000390971 USH2AO75445 5202 aa-1.97□□□□□ -2.72
SNORA40.4-201ENST00000390971 IGLC6P0CF74 106 aa-1.97□□□□□ -2.72
SNORA40.4-201ENST00000390971 Q6ZUT4 128 aa-1.97□□□□□ -2.72
SNORA40.4-201ENST00000390971 PLXNB2O15031 1838 aa-1.97□□□□□ -2.72
SNORA40.4-201ENST00000390971 DISP2A7MBM2 1401 aa-1.98□□□□□ -2.73
SNORA40.4-201ENST00000390971 PXDNQ92626 1479 aa-1.98□□□□□ -2.73
SNORA40.4-201ENST00000390971 HAMPP81172 84 aa-1.98□□□□□ -2.73
SNORA40.4-201ENST00000390971 HIST1H1AQ02539 215 aaPredicted RBP-1.98□□□□□ -2.73
SNORA40.4-201ENST00000390971 MRPL40Q9NQ50 206 aaKnown RBP-1.98□□□□□ -2.73
SNORA40.4-201ENST00000390971 HIVEP1P15822 2718 aa-1.99□□□□□ -2.73
SNORA40.4-201ENST00000390971 PITX3O75364 302 aa-1.99□□□□□ -2.73
SNORA40.4-201ENST00000390971 I3L2K1 104 aa-2□□□□□ -2.73
SNORA40.4-201ENST00000390971 CCL8P80075 99 aa-2.01□□□□□ -2.73
SNORA40.4-201ENST00000390971 SMIM4Q8WVI0 70 aa-2.01□□□□□ -2.73
SNORA40.4-201ENST00000390971 SPTSSAQ969W0 71 aa-2.01□□□□□ -2.73
SNORA40.4-201ENST00000390971 CASKIN1Q8WXD9 1431 aa-2.01□□□□□ -2.73
SNORA40.4-201ENST00000390971 CDK5RAP2Q96SN8 1893 aa-2.02□□□□□ -2.73
SNORA40.4-201ENST00000390971 R4GMQ9 66 aa-2.02□□□□□ -2.73
SNORA40.4-201ENST00000390971 LOC730098B7Z3J9 87 aa-2.03□□□□□ -2.73
SNORA40.4-201ENST00000390971 NCR2O95944 276 aa-2.03□□□□□ -2.73
SNORA40.4-201ENST00000390971 NEFHP12036 1026 aa-2.03□□□□□ -2.73
SNORA40.4-201ENST00000390971 TRBV6-1A0A0K0K1D8 114 aa-2.04□□□□□ -2.74
SNORA40.4-201ENST00000390971 SNCGO76070 127 aa-2.04□□□□□ -2.74
SNORA40.4-201ENST00000390971 TSPAN19P0C672 248 aa-2.04□□□□□ -2.74
SNORA40.4-201ENST00000390971 RRAS2P62070 204 aaPredicted RBP-2.04□□□□□ -2.74
SNORA40.4-201ENST00000390971 SPAG11AQ6PDA7 123 aa-2.04□□□□□ -2.74
SNORA40.4-201ENST00000390971 AGPAT4-IT1Q9H0P7 198 aa-2.04□□□□□ -2.74
SNORA40.4-201ENST00000390971 LRRC37A2A6NM11 1700 aa-2.05□□□□□ -2.74
SNORA40.4-201ENST00000390971 PPP1R17O96001 155 aa-2.05□□□□□ -2.74
SNORA40.4-201ENST00000390971 PIGYQ3MUY2 71 aa-2.05□□□□□ -2.74
SNORA40.4-201ENST00000390971 S100A7L2Q5SY68 101 aa-2.05□□□□□ -2.74
SNORA40.4-201ENST00000390971 AIF1LQ9BQI0 150 aa-2.05□□□□□ -2.74
SNORA40.4-201ENST00000390971 RYR3Q15413 4870 aa-2.05□□□□□ -2.74
SNORA40.4-201ENST00000390971 J3QR89 54 aa-2.06□□□□□ -2.74
SNORA40.4-201ENST00000390971 NDUFB6O95139 128 aa-2.06□□□□□ -2.74
SNORA40.4-201ENST00000390971 PRDM2Q13029 1718 aa-2.06□□□□□ -2.74
SNORA40.4-201ENST00000390971 PRG4Q92954 1404 aaPredicted RBP-2.07□□□□□ -2.74
SNORA40.4-201ENST00000390971 SCIMPQ6UWF3 145 aa-2.07□□□□□ -2.74
SNORA40.4-201ENST00000390971 SETD2Q9BYW2 2564 aaPredicted RBP-2.07□□□□□ -2.74
SNORA40.4-201ENST00000390971 MYO7BQ6PIF6 2116 aa-2.08□□□□□ -2.74
SNORA40.4-201ENST00000390971 NWD2Q9ULI1 1742 aa-2.08□□□□□ -2.74
SNORA40.4-201ENST00000390971 M0R135 149 aa-2.08□□□□□ -2.74
SNORA40.4-201ENST00000390971 LINC00694P0DN24 101 aa-2.08□□□□□ -2.74
SNORA40.4-201ENST00000390971 SMIM3Q9BZL3 60 aa-2.08□□□□□ -2.74
SNORA40.4-201ENST00000390971 HYDINQ4G0P3 5121 aa-2.08□□□□□ -2.74
SNORA40.4-201ENST00000390971 MRC1P22897 1456 aa-2.08□□□□□ -2.74
SNORA40.4-201ENST00000390971 CTXND1A0A1B0GTU2 59 aa-2.09□□□□□ -2.74
SNORA40.4-201ENST00000390971 SCGB1A1P11684 91 aa-2.09□□□□□ -2.74
SNORA40.4-201ENST00000390971 TAC4Q86UU9 113 aa-2.09□□□□□ -2.74
SNORA40.4-201ENST00000390971 SEC11CQ9BY50 192 aa-2.09□□□□□ -2.74
SNORA40.4-201ENST00000390971 CNOT1A5YKK6 2376 aaKnown RBP-2.09□□□□□ -2.74
SNORA40.4-201ENST00000390971 ALX1Q15699 326 aa-2.1□□□□□ -2.75
SNORA40.4-201ENST00000390971 GSKIPQ9P0R6 139 aa-2.1□□□□□ -2.75
SNORA40.4-201ENST00000390971 IFT140Q96RY7 1462 aa-2.11□□□□□ -2.75
SNORA40.4-201ENST00000390971 PAPPAQ13219 1627 aa-2.11□□□□□ -2.75
SNORA40.4-201ENST00000390971 TGP01266 2768 aa-2.11□□□□□ -2.75
SNORA40.4-201ENST00000390971 WDR7Q9Y4E6 1490 aa-2.12□□□□□ -2.75
SNORA40.4-201ENST00000390971 SIX6O95475 246 aa-2.12□□□□□ -2.75
SNORA40.4-201ENST00000390971 MYH6P13533 1939 aa-2.13□□□□□ -2.75
SNORA40.4-201ENST00000390971 URB1O60287 2271 aaKnown RBP-2.13□□□□□ -2.75
SNORA40.4-201ENST00000390971 COX6B1P14854 86 aa-2.13□□□□□ -2.75
SNORA40.4-201ENST00000390971 RYR1P21817 5038 aa-2.13□□□□□ -2.75
SNORA40.4-201ENST00000390971 M0R2Z0 102 aa-2.14□□□□□ -2.75
SNORA40.4-201ENST00000390971 ZNF518AQ6AHZ1 1483 aa-2.14□□□□□ -2.75
SNORA40.4-201ENST00000390971 SPRR1BP22528 89 aa-2.15□□□□□ -2.75
SNORA40.4-201ENST00000390971 COX17Q14061 63 aa-2.15□□□□□ -2.75
SNORA40.4-201ENST00000390971 TSC2P49815 1807 aa-2.15□□□□□ -2.75
SNORA40.4-201ENST00000390971 FLGP20930 4061 aaPredicted RBP-2.16□□□□□ -2.76
SNORA40.4-201ENST00000390971 MYH8P13535 1937 aa-2.16□□□□□ -2.76
SNORA40.4-201ENST00000390971 SPAARA0A1B0GVQ0 90 aa-2.16□□□□□ -2.76
SNORA40.4-201ENST00000390971 K7ERU9 68 aa-2.17□□□□□ -2.76
SNORA40.4-201ENST00000390971 GUCA1AP43080 201 aaPredicted RBP-2.17□□□□□ -2.76
SNORA40.4-201ENST00000390971 CKS1BP61024 79 aa-2.17□□□□□ -2.76
SNORA40.4-201ENST00000390971 AQP10Q96PS8 301 aa-2.17□□□□□ -2.76
SNORA40.4-201ENST00000390971 SDF2Q99470 211 aa-2.17□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms