RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 VPREB3Q9UKI3 123 aa6.56□□□□□ -1.36
PKP4-202ENST00000389759 IGHV4-61A0A0C4DH41 118 aa6.56□□□□□ -1.36
PKP4-202ENST00000389759 TRBV12-3P01733 135 aa6.56□□□□□ -1.36
PKP4-202ENST00000389759 TRBV30A0A0K0K1B3 111 aa6.55□□□□□ -1.36
PKP4-202ENST00000389759 IGHG2P01859 326 aa6.55□□□□□ -1.36
PKP4-202ENST00000389759 IGF1P05019 195 aa6.55□□□□□ -1.36
PKP4-202ENST00000389759 NAV2Q8IVL1 2488 aa6.55□□□□□ -1.36
PKP4-202ENST00000389759 ARHGAP32A7KAX9 2087 aa6.55□□□□□ -1.36
PKP4-202ENST00000389759 NRACQ8N912 160 aa6.55□□□□□ -1.36
PKP4-202ENST00000389759 SLURP1P55000 103 aa6.54□□□□□ -1.36
PKP4-202ENST00000389759 HIST2H2BDQ6DRA6 164 aa6.54□□□□□ -1.36
PKP4-202ENST00000389759 C14orf132Q9NPU4 83 aa6.54□□□□□ -1.36
PKP4-202ENST00000389759 TMEM223A0PJW6 202 aa6.54□□□□□ -1.36
PKP4-202ENST00000389759 SIRPDQ9H106 197 aa6.54□□□□□ -1.36
PKP4-202ENST00000389759 HHLA3Q9XRX5 114 aa6.54□□□□□ -1.36
PKP4-202ENST00000389759 IGLV4-3A0A075B6K6 122 aa6.54□□□□□ -1.36
PKP4-202ENST00000389759 MRPS12O15235 138 aaKnown RBP6.54□□□□□ -1.36
PKP4-202ENST00000389759 IGHV3-30P01768 117 aa6.54□□□□□ -1.36
PKP4-202ENST00000389759 IGHV3-30-5P0DP03 117 aa6.54□□□□□ -1.36
PKP4-202ENST00000389759 ZFAND2AQ8N6M9 145 aa6.54□□□□□ -1.36
PKP4-202ENST00000389759 CDKN2A-AS1Q9UH64 79 aa6.54□□□□□ -1.36
PKP4-202ENST00000389759 SMAD5-AS1Q9Y6J3 95 aa6.54□□□□□ -1.36
PKP4-202ENST00000389759 WDFY4Q6ZS81 3184 aa6.54□□□□□ -1.36
PKP4-202ENST00000389759 GAS8-AS1O95177 125 aa6.53□□□□□ -1.36
PKP4-202ENST00000389759 C22orf34Q6ZV56 151 aa6.53□□□□□ -1.36
PKP4-202ENST00000389759 CITED2Q99967 270 aaPredicted RBP6.53□□□□□ -1.36
PKP4-202ENST00000389759 ODF3BA8MYP8 253 aa6.53□□□□□ -1.36
PKP4-202ENST00000389759 ZFAND3Q9H8U3 227 aa6.53□□□□□ -1.36
PKP4-202ENST00000389759 TNRC6BQ9UPQ9 1833 aaKnown RBP6.53□□□□□ -1.36
PKP4-202ENST00000389759 LINC01548A6NM66 108 aa6.53□□□□□ -1.36
PKP4-202ENST00000389759 IGF2-ASQ6U949 168 aa6.53□□□□□ -1.36
PKP4-202ENST00000389759 CHD9Q3L8U1 2897 aa6.52□□□□□ -1.36
PKP4-202ENST00000389759 Q6ZQT7 251 aa6.52□□□□□ -1.37
PKP4-202ENST00000389759 CNFNQ9BYD5 112 aa6.52□□□□□ -1.37
PKP4-202ENST00000389759 IGHV4OR15-8A0A075B7B6 117 aa6.52□□□□□ -1.37
PKP4-202ENST00000389759 A0A087WW49 117 aa6.52□□□□□ -1.37
PKP4-202ENST00000389759 TRBV27A0A0K0K1C4 114 aa6.52□□□□□ -1.37
PKP4-202ENST00000389759 CDK2AP2O75956 126 aa6.52□□□□□ -1.37
PKP4-202ENST00000389759 ABCA2Q9BZC7 2435 aa6.52□□□□□ -1.37
PKP4-202ENST00000389759 C3orf22Q8N5N4 141 aa6.52□□□□□ -1.37
PKP4-202ENST00000389759 C11orf21Q9P2W6 132 aa6.52□□□□□ -1.37
PKP4-202ENST00000389759 TRBV10-1A0A0K0K1A3 114 aa6.51□□□□□ -1.37
PKP4-202ENST00000389759 TMEM256-PLSCR3K7ERE1 68 aa6.51□□□□□ -1.37
PKP4-202ENST00000389759 PRB1P04280 392 aa6.51□□□□□ -1.37
PKP4-202ENST00000389759 IGLV10-54A0A075B6I4 117 aa6.51□□□□□ -1.37
PKP4-202ENST00000389759 SDIM1Q6ZPB5 146 aa6.51□□□□□ -1.37
PKP4-202ENST00000389759 FRYLO94915 3013 aa6.51□□□□□ -1.37
PKP4-202ENST00000389759 GYPEP15421 78 aa6.51□□□□□ -1.37
PKP4-202ENST00000389759 C16orf74Q96GX8 76 aa6.51□□□□□ -1.37
PKP4-202ENST00000389759 C20orf173Q96LM9 149 aa6.51□□□□□ -1.37
PKP4-202ENST00000389759 NUP210LQ5VU65 1888 aa6.51□□□□□ -1.37
PKP4-202ENST00000389759 LY6LH3BQJ8 138 aa6.51□□□□□ -1.37
PKP4-202ENST00000389759 M0QY20 66 aa6.51□□□□□ -1.37
PKP4-202ENST00000389759 C20orf197Q8N268 126 aa6.51□□□□□ -1.37
PKP4-202ENST00000389759 LINC00308Q8TCZ7 52 aa6.51□□□□□ -1.37
PKP4-202ENST00000389759 IMUPQ9GZP8 106 aa6.51□□□□□ -1.37
PKP4-202ENST00000389759 PRO3102Q9H379 93 aa6.51□□□□□ -1.37
PKP4-202ENST00000389759 ATG2AQ2TAZ0 1938 aa6.51□□□□□ -1.37
PKP4-202ENST00000389759 HIVEP2P31629 2446 aa6.5□□□□□ -1.37
PKP4-202ENST00000389759 TRAV23DV6A0A075B6W5 121 aa6.5□□□□□ -1.37
PKP4-202ENST00000389759 CCDC179H3BU77 68 aa6.5□□□□□ -1.37
PKP4-202ENST00000389759 CCL24O00175 119 aa6.5□□□□□ -1.37
PKP4-202ENST00000389759 FUSP35637 526 aaKnown RBP eCLIP6.5□□□□□ -1.37
PKP4-202ENST00000389759 Q6ZS46 218 aa6.5□□□□□ -1.37
PKP4-202ENST00000389759 ODF3Q96PU9 254 aa6.5□□□□□ -1.37
PKP4-202ENST00000389759 ZMAT4Q9H898 229 aa6.5□□□□□ -1.37
PKP4-202ENST00000389759 IGHV4-4A0A075B6R2 117 aa6.5□□□□□ -1.37
PKP4-202ENST00000389759 IGHV4-30-2A0A087WSY4 118 aa6.5□□□□□ -1.37
PKP4-202ENST00000389759 HIVEP3Q5T1R4 2406 aa6.5□□□□□ -1.37
PKP4-202ENST00000389759 TRBV6-5A0A0K0K1A5 114 aa6.5□□□□□ -1.37
PKP4-202ENST00000389759 EBI3Q14213 229 aa6.5□□□□□ -1.37
PKP4-202ENST00000389759 NREPQ16612 68 aa6.49□□□□□ -1.37
PKP4-202ENST00000389759 FBXL19-AS1Q494R0 122 aa6.49□□□□□ -1.37
PKP4-202ENST00000389759 LTBP2Q14767 1821 aa6.49□□□□□ -1.37
PKP4-202ENST00000389759 H3BQ85 93 aa6.49□□□□□ -1.37
PKP4-202ENST00000389759 NDUFC2O95298 119 aa6.49□□□□□ -1.37
PKP4-202ENST00000389759 LINC00467Q9BRT7 94 aa6.49□□□□□ -1.37
PKP4-202ENST00000389759 A0A096LNJ9 63 aa6.49□□□□□ -1.37
PKP4-202ENST00000389759 TMEM89A2RUT3 159 aa6.49□□□□□ -1.37
PKP4-202ENST00000389759 C10orf142B7Z368 130 aa6.49□□□□□ -1.37
PKP4-202ENST00000389759 LST1O00453 97 aa6.49□□□□□ -1.37
PKP4-202ENST00000389759 POLR2KP53803 58 aaKnown RBP6.49□□□□□ -1.37
PKP4-202ENST00000389759 FSTL3O95633 263 aa6.49□□□□□ -1.37
PKP4-202ENST00000389759 APOC4P55056 127 aa6.49□□□□□ -1.37
PKP4-202ENST00000389759 DEFB105AQ8NG35 78 aa6.49□□□□□ -1.37
PKP4-202ENST00000389759 Q96MF0 132 aa6.49□□□□□ -1.37
PKP4-202ENST00000389759 COL6A3P12111 3177 aa6.49□□□□□ -1.37
PKP4-202ENST00000389759 IGF2RP11717 2491 aa6.49□□□□□ -1.37
PKP4-202ENST00000389759 NDUFA7O95182 113 aa6.48□□□□□ -1.37
PKP4-202ENST00000389759 UBE2D1P51668 147 aa6.48□□□□□ -1.37
PKP4-202ENST00000389759 C10orf105Q8TEF2 133 aa6.48□□□□□ -1.37
PKP4-202ENST00000389759 RNASE3P12724 160 aaKnown RBP6.48□□□□□ -1.37
PKP4-202ENST00000389759 PDE6GP18545 87 aa6.48□□□□□ -1.37
PKP4-202ENST00000389759 CXCL5P42830 114 aa6.48□□□□□ -1.37
PKP4-202ENST00000389759 SETD2Q9BYW2 2564 aaPredicted RBP6.48□□□□□ -1.37
PKP4-202ENST00000389759 K7EQG2 157 aa6.48□□□□□ -1.37
PKP4-202ENST00000389759 NDUFA1O15239 70 aa6.48□□□□□ -1.37
PKP4-202ENST00000389759 PSCAO43653 123 aa6.48□□□□□ -1.37
PKP4-202ENST00000389759 ADORA2A-AS1P86434 159 aa6.48□□□□□ -1.37
PKP4-202ENST00000389759 PYGO1Q9Y3Y4 419 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms