RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 ATP6V0E1O15342 81 aa15.44■□□□□ 0.06
NKX3-2-201ENST00000382438 BEAN1Q3B7T3 259 aa15.44■□□□□ 0.06
NKX3-2-201ENST00000382438 MRPS36P82909 103 aaKnown RBP15.44■□□□□ 0.06
NKX3-2-201ENST00000382438 TECTAO75443 2155 aa15.43■□□□□ 0.06
NKX3-2-201ENST00000382438 U3KQE9 123 aa15.43■□□□□ 0.06
NKX3-2-201ENST00000382438 SYNJ2BPP57105 145 aa15.43■□□□□ 0.06
NKX3-2-201ENST00000382438 C9orf129Q5T035 196 aaKnown RBP15.43■□□□□ 0.06
NKX3-2-201ENST00000382438 E7EQL1 145 aa15.42■□□□□ 0.06
NKX3-2-201ENST00000382438 LY6HO94772 140 aa15.42■□□□□ 0.06
NKX3-2-201ENST00000382438 FHL2Q14192 279 aa15.42■□□□□ 0.06
NKX3-2-201ENST00000382438 FAM110DQ8TAY7 271 aaPredicted RBP15.42■□□□□ 0.06
NKX3-2-201ENST00000382438 MRAPQ8TCY5 172 aa15.42■□□□□ 0.06
NKX3-2-201ENST00000382438 LINC01561Q8N1V8 128 aa15.41■□□□□ 0.06
NKX3-2-201ENST00000382438 LY6G5BQ8NDX9 201 aa15.41■□□□□ 0.06
NKX3-2-201ENST00000382438 USP17L23D6RBM5 183 aa15.4■□□□□ 0.06
NKX3-2-201ENST00000382438 UNQ9165/PRO28630Q6UXU0 137 aa15.4■□□□□ 0.06
NKX3-2-201ENST00000382438 Q8N9W7 124 aa15.4■□□□□ 0.06
NKX3-2-201ENST00000382438 PTPRZ1P23471 2315 aaPredicted RBP15.4■□□□□ 0.06
NKX3-2-201ENST00000382438 LINC00308Q8TCZ7 52 aa15.4■□□□□ 0.06
NKX3-2-201ENST00000382438 C14orf132Q9NPU4 83 aa15.4■□□□□ 0.06
NKX3-2-201ENST00000382438 INAFM2P0DMQ5 153 aa15.39■□□□□ 0.06
NKX3-2-201ENST00000382438 UCNP55089 124 aa15.38■□□□□ 0.05
NKX3-2-201ENST00000382438 LINC00336Q6ZUF6 198 aa15.38■□□□□ 0.05
NKX3-2-201ENST00000382438 Q8N6K4 173 aa15.38■□□□□ 0.05
NKX3-2-201ENST00000382438 LINC00846Q9NV44 126 aa15.38■□□□□ 0.05
NKX3-2-201ENST00000382438 DNAL4O96015 105 aa15.38■□□□□ 0.05
NKX3-2-201ENST00000382438 FAM223AQ8IWN6 122 aa15.38■□□□□ 0.05
NKX3-2-201ENST00000382438 KLK9Q9UKQ9 250 aa15.38■□□□□ 0.05
NKX3-2-201ENST00000382438 IGHV3-73A0A0B4J1V6 119 aa15.37■□□□□ 0.05
NKX3-2-201ENST00000382438 FAM223BA6NKX1 122 aa15.37■□□□□ 0.05
NKX3-2-201ENST00000382438 SOSTDC1Q6X4U4 206 aa15.37■□□□□ 0.05
NKX3-2-201ENST00000382438 C1orf43Q9BWL3 253 aa15.37■□□□□ 0.05
NKX3-2-201ENST00000382438 MALP21145 153 aa15.36■□□□□ 0.05
NKX3-2-201ENST00000382438 PRIMA1Q86XR5 153 aa15.36■□□□□ 0.05
NKX3-2-201ENST00000382438 J3QLI3 93 aa15.36■□□□□ 0.05
NKX3-2-201ENST00000382438 PFN2P35080 140 aa15.36■□□□□ 0.05
NKX3-2-201ENST00000382438 ARRDC1-AS1Q9H2J1 176 aa15.36■□□□□ 0.05
NKX3-2-201ENST00000382438 PIEZO2Q9H5I5 2752 aa15.36■□□□□ 0.05
NKX3-2-201ENST00000382438 GVINP1Q7Z2Y8 2422 aa15.36■□□□□ 0.05
NKX3-2-201ENST00000382438 SOCS3O14543 225 aa15.35■□□□□ 0.05
NKX3-2-201ENST00000382438 DEFB109BQ30KR1 87 aa15.35■□□□□ 0.05
NKX3-2-201ENST00000382438 CUL9Q8IWT3 2517 aa15.35■□□□□ 0.05
NKX3-2-201ENST00000382438 IGFL2Q6UWQ7 119 aa15.35■□□□□ 0.05
NKX3-2-201ENST00000382438 CDKN2A-AS1Q9UH64 79 aa15.35■□□□□ 0.05
NKX3-2-201ENST00000382438 AKAP6Q13023 2319 aa15.35■□□□□ 0.05
NKX3-2-201ENST00000382438 ODF3BA8MYP8 253 aa15.35■□□□□ 0.05
NKX3-2-201ENST00000382438 TRBV12-3P01733 135 aa15.35■□□□□ 0.05
NKX3-2-201ENST00000382438 PKIGQ9Y2B9 76 aa15.35■□□□□ 0.05
NKX3-2-201ENST00000382438 TRAV12-2A0A075B6T6 113 aa15.34■□□□□ 0.05
NKX3-2-201ENST00000382438 IGKV3-20P01619 116 aa15.34■□□□□ 0.05
NKX3-2-201ENST00000382438 SORL1Q92673 2214 aa15.34■□□□□ 0.05
NKX3-2-201ENST00000382438 IGHG2P01859 326 aa15.34■□□□□ 0.05
NKX3-2-201ENST00000382438 HILS1P60008 231 aa15.33■□□□□ 0.04
NKX3-2-201ENST00000382438 CIRBPQ14011 172 aaKnown RBP15.33■□□□□ 0.04
NKX3-2-201ENST00000382438 APRG1Q8IVJ8 170 aa15.33■□□□□ 0.04
NKX3-2-201ENST00000382438 Q9H8V8 135 aa15.33■□□□□ 0.04
NKX3-2-201ENST00000382438 PROK1P58294 105 aa15.32■□□□□ 0.04
NKX3-2-201ENST00000382438 Q9UF83 564 aa15.32■□□□□ 0.04
NKX3-2-201ENST00000382438 TINCRA0A1B0GVN0 87 aa15.31■□□□□ 0.04
NKX3-2-201ENST00000382438 WFDC9Q8NEX5 89 aa15.31■□□□□ 0.04
NKX3-2-201ENST00000382438 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.31■□□□□ 0.04
NKX3-2-201ENST00000382438 IGKV2-29A2NJV5 120 aaPredicted RBP15.31■□□□□ 0.04
NKX3-2-201ENST00000382438 TIMM17BO60830 172 aa15.31■□□□□ 0.04
NKX3-2-201ENST00000382438 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.3■□□□□ 0.04
NKX3-2-201ENST00000382438 KLLNB2CW77 178 aa15.3■□□□□ 0.04
NKX3-2-201ENST00000382438 RPL35AP18077 110 aaKnown RBP15.3■□□□□ 0.04
NKX3-2-201ENST00000382438 FAM222AQ5U5X8 452 aa15.3■□□□□ 0.04
NKX3-2-201ENST00000382438 Q6JHZ5 121 aa15.3■□□□□ 0.04
NKX3-2-201ENST00000382438 IGHV3-16A0A0C4DH30 117 aa15.29■□□□□ 0.04
NKX3-2-201ENST00000382438 K7ENP7 123 aa15.29■□□□□ 0.04
NKX3-2-201ENST00000382438 PRO0628Q9UI54 55 aa15.29■□□□□ 0.04
NKX3-2-201ENST00000382438 SPTA1P02549 2419 aa15.29■□□□□ 0.04
NKX3-2-201ENST00000382438 NDUFA1O15239 70 aa15.29■□□□□ 0.04
NKX3-2-201ENST00000382438 AKAP13Q12802 2813 aa15.28■□□□□ 0.04
NKX3-2-201ENST00000382438 PIK3CD-AS1Q5SR53 167 aa15.28■□□□□ 0.04
NKX3-2-201ENST00000382438 MINOS1Q5TGZ0 78 aa15.28■□□□□ 0.04
NKX3-2-201ENST00000382438 COL6A6A6NMZ7 2263 aa15.27■□□□□ 0.04
NKX3-2-201ENST00000382438 C9orf85Q96MD7 179 aa15.26■□□□□ 0.03
NKX3-2-201ENST00000382438 TMEM243Q9BU79 118 aa15.26■□□□□ 0.03
NKX3-2-201ENST00000382438 TRAV23DV6A0A075B6W5 121 aa15.26■□□□□ 0.03
NKX3-2-201ENST00000382438 C20orf197Q8N268 126 aa15.26■□□□□ 0.03
NKX3-2-201ENST00000382438 EP300Q09472 2414 aaPredicted RBP15.26■□□□□ 0.03
NKX3-2-201ENST00000382438 GHRHP01286 108 aa15.25■□□□□ 0.03
NKX3-2-201ENST00000382438 COX6A2Q02221 97 aa15.25■□□□□ 0.03
NKX3-2-201ENST00000382438 A0A087WYN8 130 aa15.25■□□□□ 0.03
NKX3-2-201ENST00000382438 EDN2P20800 178 aa15.25■□□□□ 0.03
NKX3-2-201ENST00000382438 PRORYQ9H606 182 aa15.25■□□□□ 0.03
NKX3-2-201ENST00000382438 NCR3O14931 201 aa15.24■□□□□ 0.03
NKX3-2-201ENST00000382438 IGHV3-11P01762 117 aa15.24■□□□□ 0.03
NKX3-2-201ENST00000382438 UBE2D4Q9Y2X8 147 aa15.24■□□□□ 0.03
NKX3-2-201ENST00000382438 RPL28P46779 137 aaKnown RBP15.24■□□□□ 0.03
NKX3-2-201ENST00000382438 HTN1P15515 57 aa15.23■□□□□ 0.03
NKX3-2-201ENST00000382438 IGHV3-38A0A0C4DH36 116 aa15.22■□□□□ 0.03
NKX3-2-201ENST00000382438 WFDC11Q8NEX6 87 aa15.22■□□□□ 0.03
NKX3-2-201ENST00000382438 BDP1A6H8Y1 2624 aa15.22■□□□□ 0.03
NKX3-2-201ENST00000382438 CELSR1Q9NYQ6 3014 aa15.21■□□□□ 0.03
NKX3-2-201ENST00000382438 KNCNA6PVL3 124 aa15.21■□□□□ 0.03
NKX3-2-201ENST00000382438 HIST2H2BCQ6DN03 193 aa15.21■□□□□ 0.02
NKX3-2-201ENST00000382438 HIST2H2BDQ6DRA6 164 aa15.21■□□□□ 0.02
NKX3-2-201ENST00000382438 RHPN1-AS1Q9BWJ2 59 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms