RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.47□□□□□ -1.69
RFX3-204ENST00000382004 IGKV2-28A0A075B6P5 120 aa4.47□□□□□ -1.69
RFX3-204ENST00000382004 IGKV2D-28P01615 120 aa4.47□□□□□ -1.69
RFX3-204ENST00000382004 SLX1AQ9BQ83 275 aa4.47□□□□□ -1.69
RFX3-204ENST00000382004 DEFB131BA0A096LNP1 70 aa4.46□□□□□ -1.7
RFX3-204ENST00000382004 TP53TG3Q9ULZ0 132 aa4.46□□□□□ -1.7
RFX3-204ENST00000382004 C20orf203Q8NBC4 194 aa4.46□□□□□ -1.7
RFX3-204ENST00000382004 M0R2N4 97 aa4.46□□□□□ -1.7
RFX3-204ENST00000382004 CTRLP40313 264 aa4.46□□□□□ -1.7
RFX3-204ENST00000382004 IGLV2-18A0A075B6J9 118 aa4.46□□□□□ -1.7
RFX3-204ENST00000382004 RSPO1Q2MKA7 263 aaPredicted RBP4.46□□□□□ -1.7
RFX3-204ENST00000382004 BRWD3Q6RI45 1802 aa4.46□□□□□ -1.7
RFX3-204ENST00000382004 FAM19A3Q7Z5A8 133 aa4.46□□□□□ -1.7
RFX3-204ENST00000382004 LINC00467Q9BRT7 94 aa4.46□□□□□ -1.7
RFX3-204ENST00000382004 MAP6D1Q9H9H5 199 aa4.46□□□□□ -1.7
RFX3-204ENST00000382004 PCDH15Q96QU1 1955 aa4.46□□□□□ -1.7
RFX3-204ENST00000382004 K7EMT4 169 aa4.45□□□□□ -1.7
RFX3-204ENST00000382004 FAM222AQ5U5X8 452 aa4.45□□□□□ -1.7
RFX3-204ENST00000382004 Q6ZTI0 123 aa4.45□□□□□ -1.7
RFX3-204ENST00000382004 ZSWIM8A7E2V4 1837 aa4.45□□□□□ -1.7
RFX3-204ENST00000382004 ATP5EP56381 51 aaPredicted RBP4.45□□□□□ -1.7
RFX3-204ENST00000382004 SPATA12Q7Z6I5 190 aa4.45□□□□□ -1.7
RFX3-204ENST00000382004 SPANXB1Q9NS25 103 aaPredicted RBP4.45□□□□□ -1.7
RFX3-204ENST00000382004 UBE2D2P62837 147 aa4.45□□□□□ -1.7
RFX3-204ENST00000382004 ATP5EP2Q5VTU8 51 aa4.45□□□□□ -1.7
RFX3-204ENST00000382004 POM121L12Q8N7R1 296 aa4.45□□□□□ -1.7
RFX3-204ENST00000382004 PRYO14603 147 aa4.45□□□□□ -1.7
RFX3-204ENST00000382004 HILS1P60008 231 aa4.45□□□□□ -1.7
RFX3-204ENST00000382004 UNQ9165/PRO28630Q6UXU0 137 aa4.45□□□□□ -1.7
RFX3-204ENST00000382004 C11orf53Q8IXP5 236 aa4.45□□□□□ -1.7
RFX3-204ENST00000382004 NDUFC1O43677 76 aa4.45□□□□□ -1.7
RFX3-204ENST00000382004 KIAA1671Q9BY89 1806 aa4.45□□□□□ -1.7
RFX3-204ENST00000382004 FAM167A-AS1Q96KT0 104 aa4.45□□□□□ -1.7
RFX3-204ENST00000382004 NLRC5Q86WI3 1866 aa4.44□□□□□ -1.7
RFX3-204ENST00000382004 LY6LH3BQJ8 138 aa4.44□□□□□ -1.7
RFX3-204ENST00000382004 ANAPC1Q9H1A4 1944 aa4.44□□□□□ -1.7
RFX3-204ENST00000382004 COL4A6Q14031 1691 aa4.44□□□□□ -1.7
RFX3-204ENST00000382004 A0A0J9YX75 114 aa4.44□□□□□ -1.7
RFX3-204ENST00000382004 C6orf99Q4VX62 202 aa4.44□□□□□ -1.7
RFX3-204ENST00000382004 ZNF524Q96C55 264 aa4.44□□□□□ -1.7
RFX3-204ENST00000382004 PTPRQQ9UMZ3 2332 aa4.44□□□□□ -1.7
RFX3-204ENST00000382004 TMEM223A0PJW6 202 aa4.44□□□□□ -1.7
RFX3-204ENST00000382004 FRMD6-AS1P0C7T7 363 aa4.44□□□□□ -1.7
RFX3-204ENST00000382004 PLXNB3Q9ULL4 1909 aa4.44□□□□□ -1.7
RFX3-204ENST00000382004 RPL37AP8A6NKH3 93 aa4.44□□□□□ -1.7
RFX3-204ENST00000382004 PMAIP1Q13794 54 aa4.44□□□□□ -1.7
RFX3-204ENST00000382004 C22orf34Q6ZV56 151 aa4.44□□□□□ -1.7
RFX3-204ENST00000382004 RETNLBQ9BQ08 111 aa4.44□□□□□ -1.7
RFX3-204ENST00000382004 CDKN2A-AS1Q9UH64 79 aa4.44□□□□□ -1.7
RFX3-204ENST00000382004 PLXNA4Q9HCM2 1894 aa4.43□□□□□ -1.7
RFX3-204ENST00000382004 INSL3P51460 131 aa4.43□□□□□ -1.7
RFX3-204ENST00000382004 PLXNA3P51805 1871 aa4.43□□□□□ -1.7
RFX3-204ENST00000382004 NANOS2P60321 138 aaKnown RBP4.43□□□□□ -1.7
RFX3-204ENST00000382004 HCFC1P51610 2035 aa4.43□□□□□ -1.7
RFX3-204ENST00000382004 DNAJC9-AS1A6NH13 148 aa4.43□□□□□ -1.7
RFX3-204ENST00000382004 TRIAP1O43715 76 aa4.43□□□□□ -1.7
RFX3-204ENST00000382004 LINC00526Q96FQ7 95 aa4.43□□□□□ -1.7
RFX3-204ENST00000382004 ZNF706Q9Y5V0 76 aaPredicted RBP4.43□□□□□ -1.7
RFX3-204ENST00000382004 ADAMTS9Q9P2N4 1935 aa4.43□□□□□ -1.7
RFX3-204ENST00000382004 FRMPD3Q5JV73 1810 aa4.43□□□□□ -1.7
RFX3-204ENST00000382004 WDR90Q96KV7 1748 aa4.43□□□□□ -1.7
RFX3-204ENST00000382004 C2orf16Q68DN1 1984 aa4.42□□□□□ -1.7
RFX3-204ENST00000382004 SYCNQ0VAF6 134 aa4.42□□□□□ -1.7
RFX3-204ENST00000382004 NDUFA7O95182 113 aa4.42□□□□□ -1.7
RFX3-204ENST00000382004 LINC00308Q8TCZ7 52 aa4.42□□□□□ -1.7
RFX3-204ENST00000382004 CRIPAKQ8N1N5 446 aa4.42□□□□□ -1.7
RFX3-204ENST00000382004 WFDC10AQ9H1F0 79 aa4.42□□□□□ -1.7
RFX3-204ENST00000382004 U3KQA8 63 aa4.42□□□□□ -1.7
RFX3-204ENST00000382004 TRBV6-5A0A0K0K1A5 114 aa4.42□□□□□ -1.7
RFX3-204ENST00000382004 E7EUB6 86 aa4.42□□□□□ -1.7
RFX3-204ENST00000382004 KIF26AQ9ULI4 1882 aaPredicted RBP4.42□□□□□ -1.7
RFX3-204ENST00000382004 Q6Q795 121 aa4.42□□□□□ -1.7
RFX3-204ENST00000382004 C20orf173Q96LM9 149 aa4.42□□□□□ -1.7
RFX3-204ENST00000382004 CELA1Q9UNI1 258 aa4.42□□□□□ -1.7
RFX3-204ENST00000382004 LYRM9A8MSI8 78 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 IBA57-AS1B1ANH7 110 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 SPG11Q96JI7 2443 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 MRPS12O15235 138 aaKnown RBP4.41□□□□□ -1.7
RFX3-204ENST00000382004 IGLV3-1P01715 115 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 SOSTDC1Q6X4U4 206 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 DSCAMO60469 2012 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 PLAC8L1A1L4L8 177 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 LY6G6CO95867 125 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 MIFP14174 115 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 SPRY4Q9C004 299 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 SPINK1P00995 79 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 PLA2G2AP14555 144 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 Q6ZQY7 126 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 NEXN-AS1Q8NBZ9 246 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 TRBV7-6A0A0J9YX20 115 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 ESRGQ1W209 222 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 LINC00482Q8N8I6 264 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 CSPG4Q6UVK1 2322 aa4.41□□□□□ -1.7
RFX3-204ENST00000382004 ZNF106Q9H2Y7 1883 aaKnown RBP4.4□□□□□ -1.7
RFX3-204ENST00000382004 ZNF80P51504 273 aaPredicted RBP4.4□□□□□ -1.7
RFX3-204ENST00000382004 Q8N7P7 452 aa4.4□□□□□ -1.7
RFX3-204ENST00000382004 CIRBP-AS1Q8TBR5 109 aa4.4□□□□□ -1.7
RFX3-204ENST00000382004 IGLV4-3A0A075B6K6 122 aa4.4□□□□□ -1.7
RFX3-204ENST00000382004 A6NDX4 124 aa4.4□□□□□ -1.7
RFX3-204ENST00000382004 PLA2G1BP04054 148 aaKnown RBP4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms