RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 TRAPPC1Q9Y5R8 145 aa10.53□□□□□ -0.72
PDGFB-202ENST00000381551 TRBV25-1A0A075B6N4 114 aa10.52□□□□□ -0.73
PDGFB-202ENST00000381551 IGHV1-24A0A0C4DH33 117 aa10.52□□□□□ -0.73
PDGFB-202ENST00000381551 SCO1O75880 301 aa10.52□□□□□ -0.73
PDGFB-202ENST00000381551 NBDYA0A0U1RRE5 68 aa10.51□□□□□ -0.73
PDGFB-202ENST00000381551 COLCA2A8K830 154 aa10.51□□□□□ -0.73
PDGFB-202ENST00000381551 TSHBP01222 138 aa10.51□□□□□ -0.73
PDGFB-202ENST00000381551 LINC01556Q5JQF7 62 aa10.51□□□□□ -0.73
PDGFB-202ENST00000381551 Q6ZR54 194 aa10.51□□□□□ -0.73
PDGFB-202ENST00000381551 NIT1Q86X76 327 aa10.51□□□□□ -0.73
PDGFB-202ENST00000381551 ALKBH7Q9BT30 221 aaPredicted RBP10.51□□□□□ -0.73
PDGFB-202ENST00000381551 M0R2N4 97 aa10.5□□□□□ -0.73
PDGFB-202ENST00000381551 CHCHD5Q9BSY4 110 aa10.5□□□□□ -0.73
PDGFB-202ENST00000381551 SMIM2Q9BVW6 85 aa10.5□□□□□ -0.73
PDGFB-202ENST00000381551 DNAH2Q9P225 4427 aa10.5□□□□□ -0.73
PDGFB-202ENST00000381551 LOC389332A0A1B0GUA5 103 aa10.49□□□□□ -0.73
PDGFB-202ENST00000381551 TMEM262E9PQX1 116 aa10.49□□□□□ -0.73
PDGFB-202ENST00000381551 K7EP13 123 aa10.49□□□□□ -0.73
PDGFB-202ENST00000381551 AMTP48728 403 aa10.49□□□□□ -0.73
PDGFB-202ENST00000381551 Q8N3U1 123 aa10.49□□□□□ -0.73
PDGFB-202ENST00000381551 KIR2DL4Q99706 377 aa10.49□□□□□ -0.73
PDGFB-202ENST00000381551 TMEM243Q9BU79 118 aa10.49□□□□□ -0.73
PDGFB-202ENST00000381551 CHCHD7Q9BUK0 85 aa10.49□□□□□ -0.73
PDGFB-202ENST00000381551 KRTAP1-5Q9BYS1 174 aa10.49□□□□□ -0.73
PDGFB-202ENST00000381551 MAP1LC3AQ9H492 121 aa10.49□□□□□ -0.73
PDGFB-202ENST00000381551 TRAV9-2A0A087WT02 112 aa10.48□□□□□ -0.73
PDGFB-202ENST00000381551 IGHV3-30P01768 117 aa10.48□□□□□ -0.73
PDGFB-202ENST00000381551 IGHV3-33P01772 117 aa10.48□□□□□ -0.73
PDGFB-202ENST00000381551 IGHV3-30-3P0DP02 117 aa10.48□□□□□ -0.73
PDGFB-202ENST00000381551 IGHV3-30-5P0DP03 117 aa10.48□□□□□ -0.73
PDGFB-202ENST00000381551 ESDP10768 282 aa10.48□□□□□ -0.73
PDGFB-202ENST00000381551 GAGE6Q13070 117 aa10.48□□□□□ -0.73
PDGFB-202ENST00000381551 FCER1GP30273 86 aa10.47□□□□□ -0.73
PDGFB-202ENST00000381551 TTC32Q5I0X7 151 aa10.47□□□□□ -0.73
PDGFB-202ENST00000381551 Q8N8P6 123 aa10.47□□□□□ -0.73
PDGFB-202ENST00000381551 A0A087WX48 190 aa10.46□□□□□ -0.73
PDGFB-202ENST00000381551 TCAPO15273 167 aa10.46□□□□□ -0.73
PDGFB-202ENST00000381551 PKIAP61925 76 aa10.46□□□□□ -0.73
PDGFB-202ENST00000381551 H7C423 109 aa10.45□□□□□ -0.74
PDGFB-202ENST00000381551 RAB5AP20339 215 aa10.45□□□□□ -0.74
PDGFB-202ENST00000381551 IFI27P40305 119 aaPredicted RBP10.45□□□□□ -0.74
PDGFB-202ENST00000381551 MPV17L2Q567V2 206 aa10.45□□□□□ -0.74
PDGFB-202ENST00000381551 C10orf126Q8N4M7 172 aa10.45□□□□□ -0.74
PDGFB-202ENST00000381551 DNAH10Q8IVF4 4471 aa10.44□□□□□ -0.74
PDGFB-202ENST00000381551 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.44□□□□□ -0.74
PDGFB-202ENST00000381551 A0A1B0GUV1 79 aa10.44□□□□□ -0.74
PDGFB-202ENST00000381551 IGKV2-29A2NJV5 120 aaPredicted RBP10.44□□□□□ -0.74
PDGFB-202ENST00000381551 IBA57-AS1B1ANH7 110 aa10.44□□□□□ -0.74
PDGFB-202ENST00000381551 UBE2L6O14933 153 aa10.44□□□□□ -0.74
PDGFB-202ENST00000381551 RBX1P62877 108 aa10.44□□□□□ -0.74
PDGFB-202ENST00000381551 Q8N976 141 aa10.44□□□□□ -0.74
PDGFB-202ENST00000381551 NXT2Q9NPJ8 142 aaKnown RBP10.44□□□□□ -0.74
PDGFB-202ENST00000381551 TRGC2P03986 189 aa10.43□□□□□ -0.74
PDGFB-202ENST00000381551 PRSS3P2Q8NHM4 247 aa10.43□□□□□ -0.74
PDGFB-202ENST00000381551 BIRC6Q9NR09 4857 aa10.42□□□□□ -0.74
PDGFB-202ENST00000381551 K7EMI3 77 aa10.42□□□□□ -0.74
PDGFB-202ENST00000381551 FGF6P10767 208 aa10.42□□□□□ -0.74
PDGFB-202ENST00000381551 BTF3P20290 206 aaKnown RBP10.42□□□□□ -0.74
PDGFB-202ENST00000381551 C20orf203Q8NBC4 194 aa10.42□□□□□ -0.74
PDGFB-202ENST00000381551 C18orf32Q8TCD1 76 aa10.42□□□□□ -0.74
PDGFB-202ENST00000381551 KLK12Q9UKR0 248 aa10.42□□□□□ -0.74
PDGFB-202ENST00000381551 DNAH17Q9UFH2 4485 aa10.41□□□□□ -0.74
PDGFB-202ENST00000381551 IGLV4-60A0A075B6I1 120 aa10.41□□□□□ -0.74
PDGFB-202ENST00000381551 C1orf134Q5TEV5 83 aa10.41□□□□□ -0.74
PDGFB-202ENST00000381551 LINC01546A6NGU7 62 aa10.4□□□□□ -0.74
PDGFB-202ENST00000381551 LAGE3Q14657 143 aa10.4□□□□□ -0.74
PDGFB-202ENST00000381551 AMMECR1LQ6DCA0 310 aa10.4□□□□□ -0.74
PDGFB-202ENST00000381551 MRPL52Q86TS9 123 aaKnown RBP10.4□□□□□ -0.74
PDGFB-202ENST00000381551 C6orf223Q8N319 242 aa10.4□□□□□ -0.74
PDGFB-202ENST00000381551 ANGP03950 147 aaKnown RBP10.39□□□□□ -0.75
PDGFB-202ENST00000381551 ZNF25P17030 456 aaPredicted RBP10.39□□□□□ -0.75
PDGFB-202ENST00000381551 ORMDL2Q53FV1 153 aa10.39□□□□□ -0.75
PDGFB-202ENST00000381551 RNASEKQ6P5S7 137 aaKnown RBP10.39□□□□□ -0.75
PDGFB-202ENST00000381551 ENHOQ6UWT2 76 aa10.39□□□□□ -0.75
PDGFB-202ENST00000381551 TMEM18Q96B42 140 aa10.39□□□□□ -0.75
PDGFB-202ENST00000381551 FRAS1Q86XX4 4008 aa10.38□□□□□ -0.75
PDGFB-202ENST00000381551 TRAV8-3A0A0A6YYJ7 113 aa10.38□□□□□ -0.75
PDGFB-202ENST00000381551 RPL39P62891 51 aaKnown RBP10.38□□□□□ -0.75
PDGFB-202ENST00000381551 LINC00269Q8N2A0 174 aa10.38□□□□□ -0.75
PDGFB-202ENST00000381551 URB1-AS1Q96HZ7 61 aa10.38□□□□□ -0.75
PDGFB-202ENST00000381551 PRR34Q9NV39 138 aa10.38□□□□□ -0.75
PDGFB-202ENST00000381551 UBE2D4Q9Y2X8 147 aa10.38□□□□□ -0.75
PDGFB-202ENST00000381551 CSDC2Q9Y534 153 aaKnown RBP10.38□□□□□ -0.75
PDGFB-202ENST00000381551 RTL8CO15255 209 aa10.37□□□□□ -0.75
PDGFB-202ENST00000381551 LINC00614P0C842 121 aa10.37□□□□□ -0.75
PDGFB-202ENST00000381551 SMAGPQ0VAQ4 97 aa10.37□□□□□ -0.75
PDGFB-202ENST00000381551 UBE2WQ96B02 151 aa10.37□□□□□ -0.75
PDGFB-202ENST00000381551 TMEM101Q96IK0 257 aa10.37□□□□□ -0.75
PDGFB-202ENST00000381551 TIMM21Q9BVV7 248 aa10.37□□□□□ -0.75
PDGFB-202ENST00000381551 KRTAP17-1Q9BYP8 105 aa10.37□□□□□ -0.75
PDGFB-202ENST00000381551 CDC42SE2Q9NRR3 84 aa10.37□□□□□ -0.75
PDGFB-202ENST00000381551 Q0VG73 95 aa10.36□□□□□ -0.75
PDGFB-202ENST00000381551 DGAT2L7PQ6IED9 249 aa10.36□□□□□ -0.75
PDGFB-202ENST00000381551 Q6ZRN7 208 aaPredicted RBP10.36□□□□□ -0.75
PDGFB-202ENST00000381551 FA2HQ7L5A8 372 aa10.36□□□□□ -0.75
PDGFB-202ENST00000381551 NFE4Q86UQ8 179 aa10.36□□□□□ -0.75
PDGFB-202ENST00000381551 OR5A1Q8NGJ0 315 aa10.36□□□□□ -0.75
PDGFB-202ENST00000381551 Q9HAA7 133 aa10.36□□□□□ -0.75
PDGFB-202ENST00000381551 G0S2P27469 103 aa10.35□□□□□ -0.75
PDGFB-202ENST00000381551 REG3AQ06141 175 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms