RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 DEFB104AQ8WTQ1 72 aa13.81□□□□□ -0.2
GMDS-201ENST00000380805 TRGV1A0A0A0MS02 117 aa13.81□□□□□ -0.2
GMDS-201ENST00000380805 E9PLD3 99 aa13.81□□□□□ -0.2
GMDS-201ENST00000380805 SEC11AP67812 179 aa13.81□□□□□ -0.2
GMDS-201ENST00000380805 OR4C5Q8NGB2 326 aa13.81□□□□□ -0.2
GMDS-201ENST00000380805 OVOL2Q9BRP0 275 aa13.81□□□□□ -0.2
GMDS-201ENST00000380805 ZMAT5Q9UDW3 170 aaKnown RBP13.81□□□□□ -0.2
GMDS-201ENST00000380805 Q9UF83 564 aa13.81□□□□□ -0.2
GMDS-201ENST00000380805 CRYBA4P53673 196 aa13.8□□□□□ -0.2
GMDS-201ENST00000380805 Q6ZTI0 123 aa13.8□□□□□ -0.2
GMDS-201ENST00000380805 LINC00469Q8N7U9 141 aa13.8□□□□□ -0.2
GMDS-201ENST00000380805 TRBV10-1A0A0K0K1A3 114 aa13.79□□□□□ -0.2
GMDS-201ENST00000380805 TTTY13Q9BZ97 58 aa13.79□□□□□ -0.2
GMDS-201ENST00000380805 TRBV25-1A0A075B6N4 114 aa13.78□□□□□ -0.2
GMDS-201ENST00000380805 C11orf86A6NJI1 115 aa13.78□□□□□ -0.2
GMDS-201ENST00000380805 CIDEAO60543 219 aa13.78□□□□□ -0.2
GMDS-201ENST00000380805 GAGE1Q13065 139 aa13.78□□□□□ -0.2
GMDS-201ENST00000380805 NFE4Q86UQ8 179 aa13.78□□□□□ -0.2
GMDS-201ENST00000380805 IGLV4-3A0A075B6K6 122 aa13.78□□□□□ -0.2
GMDS-201ENST00000380805 CHCHD7Q9BUK0 85 aa13.78□□□□□ -0.2
GMDS-201ENST00000380805 COX11Q9Y6N1 276 aa13.78□□□□□ -0.2
GMDS-201ENST00000380805 STAB1Q9NY15 2570 aa13.77□□□□□ -0.2
GMDS-201ENST00000380805 ZNF25P17030 456 aaPredicted RBP13.77□□□□□ -0.21
GMDS-201ENST00000380805 RRN3P1Q2M238 152 aa13.77□□□□□ -0.21
GMDS-201ENST00000380805 OR11H2Q8NH07 326 aa13.77□□□□□ -0.21
GMDS-201ENST00000380805 ORAOV1Q8WV07 137 aa13.77□□□□□ -0.21
GMDS-201ENST00000380805 ZNF479Q96JC4 524 aa13.77□□□□□ -0.21
GMDS-201ENST00000380805 MAPKAPK5-AS1Q8N8E1 139 aa13.76□□□□□ -0.21
GMDS-201ENST00000380805 SPATA3Q8NHX4 192 aa13.76□□□□□ -0.21
GMDS-201ENST00000380805 FAM104AQ969W3 186 aa13.76□□□□□ -0.21
GMDS-201ENST00000380805 NOP10Q9NPE3 64 aaKnown RBP13.76□□□□□ -0.21
GMDS-201ENST00000380805 TAX1BP3O14907 124 aa13.76□□□□□ -0.21
GMDS-201ENST00000380805 AMELXQ99217 191 aa13.76□□□□□ -0.21
GMDS-201ENST00000380805 CHAC1Q9BUX1 264 aa13.76□□□□□ -0.21
GMDS-201ENST00000380805 SPANXA1Q9NS26 97 aa13.76□□□□□ -0.21
GMDS-201ENST00000380805 K7EQD1 137 aa13.75□□□□□ -0.21
GMDS-201ENST00000380805 ZNRF2Q8NHG8 242 aa13.75□□□□□ -0.21
GMDS-201ENST00000380805 TRBV7-3A0A075B6L6 115 aa13.74□□□□□ -0.21
GMDS-201ENST00000380805 TRAV8-6A0A0B4J262 113 aa13.74□□□□□ -0.21
GMDS-201ENST00000380805 PRADC1Q9BSG0 188 aa13.74□□□□□ -0.21
GMDS-201ENST00000380805 COTL1Q14019 142 aa13.73□□□□□ -0.21
GMDS-201ENST00000380805 OPRPNQ99935 248 aaPredicted RBP13.73□□□□□ -0.21
GMDS-201ENST00000380805 UBE2D4Q9Y2X8 147 aa13.73□□□□□ -0.21
GMDS-201ENST00000380805 MYMXA0A1B0GTQ4 84 aa13.73□□□□□ -0.21
GMDS-201ENST00000380805 HERVK_113P61574 105 aa13.73□□□□□ -0.21
GMDS-201ENST00000380805 TAL2Q16559 108 aa13.73□□□□□ -0.21
GMDS-201ENST00000380805 WIPF1O43516 503 aa13.72□□□□□ -0.21
GMDS-201ENST00000380805 WFDC9Q8NEX5 89 aa13.72□□□□□ -0.21
GMDS-201ENST00000380805 VCX2Q9H322 139 aa13.72□□□□□ -0.21
GMDS-201ENST00000380805 ANK2Q01484 3957 aa13.71□□□□□ -0.21
GMDS-201ENST00000380805 A6NDN8 102 aa13.71□□□□□ -0.21
GMDS-201ENST00000380805 RPL36AP83881 106 aaKnown RBP13.71□□□□□ -0.21
GMDS-201ENST00000380805 RPL36ALQ969Q0 106 aaKnown RBP13.71□□□□□ -0.21
GMDS-201ENST00000380805 TIMM21Q9BVV7 248 aa13.71□□□□□ -0.21
GMDS-201ENST00000380805 EMP1P54849 157 aa13.7□□□□□ -0.22
GMDS-201ENST00000380805 DAZ4Q86SG3 579 aaKnown RBP13.7□□□□□ -0.22
GMDS-201ENST00000380805 LINC00612Q8N6U2 182 aa13.7□□□□□ -0.22
GMDS-201ENST00000380805 SLC25A29Q8N8R3 303 aa13.7□□□□□ -0.22
GMDS-201ENST00000380805 TM2D2Q9BX73 214 aa13.7□□□□□ -0.22
GMDS-201ENST00000380805 DAZ3Q9NR90 486 aaKnown RBP13.7□□□□□ -0.22
GMDS-201ENST00000380805 UBE2D3P61077 147 aa13.7□□□□□ -0.22
GMDS-201ENST00000380805 UBE2D2P62837 147 aa13.7□□□□□ -0.22
GMDS-201ENST00000380805 Q6ZVH6 145 aa13.7□□□□□ -0.22
GMDS-201ENST00000380805 C3orf56Q8N813 242 aa13.7□□□□□ -0.22
GMDS-201ENST00000380805 TRBV6-4A0A1B0GX49 114 aa13.69□□□□□ -0.22
GMDS-201ENST00000380805 MRPS36P82909 103 aaKnown RBP13.69□□□□□ -0.22
GMDS-201ENST00000380805 KIR2DL5BQ8NHK3 375 aa13.69□□□□□ -0.22
GMDS-201ENST00000380805 PHLDA1Q8WV24 401 aaPredicted RBP13.69□□□□□ -0.22
GMDS-201ENST00000380805 TRRAPQ9Y4A5 3859 aa13.69□□□□□ -0.22
GMDS-201ENST00000380805 IGHV3-38A0A0C4DH36 116 aa13.68□□□□□ -0.22
GMDS-201ENST00000380805 SMIM9A6NGZ8 99 aa13.68□□□□□ -0.22
GMDS-201ENST00000380805 TMEM223A0PJW6 202 aa13.67□□□□□ -0.22
GMDS-201ENST00000380805 GAGE12BA1L429 117 aa13.67□□□□□ -0.22
GMDS-201ENST00000380805 GAGE7O76087 117 aa13.67□□□□□ -0.22
GMDS-201ENST00000380805 GAGE12FP0CL80 117 aa13.67□□□□□ -0.22
GMDS-201ENST00000380805 GAGE12GP0CL81 117 aa13.67□□□□□ -0.22
GMDS-201ENST00000380805 GAGE12IP0CL82 117 aa13.67□□□□□ -0.22
GMDS-201ENST00000380805 ZNF22P17026 224 aaPredicted RBP13.67□□□□□ -0.22
GMDS-201ENST00000380805 KRTAP21-3Q3LHN1 58 aa13.67□□□□□ -0.22
GMDS-201ENST00000380805 TRGV2A0A075B6R0 118 aa13.67□□□□□ -0.22
GMDS-201ENST00000380805 H3BRM9 83 aa13.67□□□□□ -0.22
GMDS-201ENST00000380805 TMEM170BQ5T4T1 132 aa13.67□□□□□ -0.22
GMDS-201ENST00000380805 CEND1Q8N111 149 aa13.67□□□□□ -0.22
GMDS-201ENST00000380805 X6R8D5 127 aa13.67□□□□□ -0.22
GMDS-201ENST00000380805 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.66□□□□□ -0.22
GMDS-201ENST00000380805 IGKV2-29A2NJV5 120 aaPredicted RBP13.66□□□□□ -0.22
GMDS-201ENST00000380805 A0A0J9YXV3 536 aa13.65□□□□□ -0.22
GMDS-201ENST00000380805 ZNF815PA8K554 130 aa13.65□□□□□ -0.22
GMDS-201ENST00000380805 CEMP1Q6PRD7 247 aaPredicted RBP13.65□□□□□ -0.22
GMDS-201ENST00000380805 GTSF1LQ9H1H1 148 aa13.65□□□□□ -0.22
GMDS-201ENST00000380805 CSDC2Q9Y534 153 aaKnown RBP13.65□□□□□ -0.22
GMDS-201ENST00000380805 FXYD2P54710 66 aa13.64□□□□□ -0.23
GMDS-201ENST00000380805 SBSPONQ8IVN8 264 aa13.64□□□□□ -0.23
GMDS-201ENST00000380805 NOTCH3Q9UM47 2321 aa13.64□□□□□ -0.23
GMDS-201ENST00000380805 VWFP04275 2813 aa13.64□□□□□ -0.23
GMDS-201ENST00000380805 GCSHP23434 173 aa13.64□□□□□ -0.23
GMDS-201ENST00000380805 FHL2Q14192 279 aa13.64□□□□□ -0.23
GMDS-201ENST00000380805 NTM-AS1Q6ZSK4 140 aa13.64□□□□□ -0.23
GMDS-201ENST00000380805 TINCRA0A1B0GVN0 87 aa13.63□□□□□ -0.23
GMDS-201ENST00000380805 LINC00694P0DN24 101 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms