RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 CCDC179H3BU77 68 aa6.82□□□□□ -1.32
NHLRC3-202ENST00000379600 MIAQ16674 131 aa6.82□□□□□ -1.32
NHLRC3-202ENST00000379600 RNF152Q8N8N0 203 aa6.82□□□□□ -1.32
NHLRC3-202ENST00000379600 AKAP9Q99996 3911 aa6.82□□□□□ -1.32
NHLRC3-202ENST00000379600 PRSS2P07478 247 aa6.82□□□□□ -1.32
NHLRC3-202ENST00000379600 GAGE2BQ13066 116 aa6.82□□□□□ -1.32
NHLRC3-202ENST00000379600 GAGE2EQ4V326 116 aa6.82□□□□□ -1.32
NHLRC3-202ENST00000379600 GAGE2DQ9UEU5 116 aa6.82□□□□□ -1.32
NHLRC3-202ENST00000379600 NDUFA12Q9UI09 145 aa6.82□□□□□ -1.32
NHLRC3-202ENST00000379600 H3BMM0 161 aa6.81□□□□□ -1.32
NHLRC3-202ENST00000379600 SNCGO76070 127 aa6.81□□□□□ -1.32
NHLRC3-202ENST00000379600 UBE2WQ96B02 151 aa6.81□□□□□ -1.32
NHLRC3-202ENST00000379600 TRAV8-4A0A0B4J246 113 aa6.81□□□□□ -1.32
NHLRC3-202ENST00000379600 SNRPD3P62318 126 aaKnown RBP6.81□□□□□ -1.32
NHLRC3-202ENST00000379600 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.81□□□□□ -1.32
NHLRC3-202ENST00000379600 UBE2D4Q9Y2X8 147 aa6.81□□□□□ -1.32
NHLRC3-202ENST00000379600 ZANQ9Y493 2812 aa6.81□□□□□ -1.32
NHLRC3-202ENST00000379600 UTP20O75691 2785 aaKnown RBP6.81□□□□□ -1.32
NHLRC3-202ENST00000379600 TMEM61Q8N0U2 210 aa6.81□□□□□ -1.32
NHLRC3-202ENST00000379600 DAND5Q8N907 189 aa6.81□□□□□ -1.32
NHLRC3-202ENST00000379600 C15orf53Q8NAA6 179 aa6.81□□□□□ -1.32
NHLRC3-202ENST00000379600 C10orf105Q8TEF2 133 aa6.81□□□□□ -1.32
NHLRC3-202ENST00000379600 TINCRA0A1B0GVN0 87 aa6.8□□□□□ -1.32
NHLRC3-202ENST00000379600 KNCNA6PVL3 124 aa6.8□□□□□ -1.32
NHLRC3-202ENST00000379600 C2orf82Q6UX34 121 aa6.8□□□□□ -1.32
NHLRC3-202ENST00000379600 DUX5Q96PT3 197 aa6.8□□□□□ -1.32
NHLRC3-202ENST00000379600 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.8□□□□□ -1.321e-6■■■□□ 14.9
NHLRC3-202ENST00000379600 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.8□□□□□ -1.32
NHLRC3-202ENST00000379600 IGHV4-30-2A0A087WSY4 118 aa6.8□□□□□ -1.32
NHLRC3-202ENST00000379600 IGKV2-29A2NJV5 120 aaPredicted RBP6.8□□□□□ -1.32
NHLRC3-202ENST00000379600 RBMY1BA6NDE4 496 aaKnown RBP6.8□□□□□ -1.32
NHLRC3-202ENST00000379600 RBMY1EA6NEQ0 496 aaKnown RBP6.8□□□□□ -1.32
NHLRC3-202ENST00000379600 RBMY1DP0C7P1 496 aaKnown RBP6.8□□□□□ -1.32
NHLRC3-202ENST00000379600 Q6Q795 121 aa6.8□□□□□ -1.32
NHLRC3-202ENST00000379600 CUBNO60494 3623 aa6.8□□□□□ -1.32
NHLRC3-202ENST00000379600 LST1O00453 97 aa6.8□□□□□ -1.32
NHLRC3-202ENST00000379600 SYNJ2BPP57105 145 aa6.8□□□□□ -1.32
NHLRC3-202ENST00000379600 CITED2Q99967 270 aaPredicted RBP6.8□□□□□ -1.32
NHLRC3-202ENST00000379600 LINC00467Q9BRT7 94 aa6.8□□□□□ -1.32
NHLRC3-202ENST00000379600 MXRA5Q9NR99 2828 aa6.8□□□□□ -1.32
NHLRC3-202ENST00000379600 HTN1P15515 57 aa6.79□□□□□ -1.32
NHLRC3-202ENST00000379600 TTC32Q5I0X7 151 aa6.79□□□□□ -1.32
NHLRC3-202ENST00000379600 DEFB121Q5J5C9 76 aa6.79□□□□□ -1.32
NHLRC3-202ENST00000379600 PIMREGQ9BSJ6 248 aa6.79□□□□□ -1.32
NHLRC3-202ENST00000379600 CSPG4Q6UVK1 2322 aa6.79□□□□□ -1.32
NHLRC3-202ENST00000379600 CHD8Q9HCK8 2581 aa6.79□□□□□ -1.32
NHLRC3-202ENST00000379600 TRGV11A0A075B6L2 103 aa6.79□□□□□ -1.32
NHLRC3-202ENST00000379600 IGHV4-59P01825 116 aa6.79□□□□□ -1.32
NHLRC3-202ENST00000379600 IFITM1P13164 125 aa6.79□□□□□ -1.32
NHLRC3-202ENST00000379600 LY6DQ14210 128 aa6.79□□□□□ -1.32
NHLRC3-202ENST00000379600 DUX3Q96PT4 197 aa6.79□□□□□ -1.32
NHLRC3-202ENST00000379600 NCOR2Q9Y618 2525 aa6.78□□□□□ -1.32
NHLRC3-202ENST00000379600 H3BT86 120 aa6.78□□□□□ -1.32
NHLRC3-202ENST00000379600 MSMBP08118 114 aa6.78□□□□□ -1.32
NHLRC3-202ENST00000379600 CDKN2A-AS1Q9UH64 79 aa6.78□□□□□ -1.32
NHLRC3-202ENST00000379600 IGHV3-38A0A0C4DH36 116 aa6.77□□□□□ -1.33
NHLRC3-202ENST00000379600 COX6A2Q02221 97 aa6.77□□□□□ -1.33
NHLRC3-202ENST00000379600 TNFRSF18Q9Y5U5 241 aa6.77□□□□□ -1.33
NHLRC3-202ENST00000379600 GAGE12JA6NER3 117 aa6.77□□□□□ -1.33
NHLRC3-202ENST00000379600 GAGE7O76087 117 aa6.77□□□□□ -1.33
NHLRC3-202ENST00000379600 GAGE12FP0CL80 117 aa6.77□□□□□ -1.33
NHLRC3-202ENST00000379600 GAGE12GP0CL81 117 aa6.77□□□□□ -1.33
NHLRC3-202ENST00000379600 GAGE12IP0CL82 117 aa6.77□□□□□ -1.33
NHLRC3-202ENST00000379600 UCNP55089 124 aa6.77□□□□□ -1.33
NHLRC3-202ENST00000379600 GAGE4Q13068 117 aa6.77□□□□□ -1.33
NHLRC3-202ENST00000379600 TMEM101Q96IK0 257 aa6.77□□□□□ -1.33
NHLRC3-202ENST00000379600 SPANXA1Q9NS26 97 aa6.77□□□□□ -1.33
NHLRC3-202ENST00000379600 SPG11Q96JI7 2443 aa6.77□□□□□ -1.33
NHLRC3-202ENST00000379600 IGLV5-45A0A087WSX0 123 aa6.76□□□□□ -1.33
NHLRC3-202ENST00000379600 FLNCQ14315 2725 aa6.76□□□□□ -1.33
NHLRC3-202ENST00000379600 CFAP46Q8IYW2 2715 aa6.76□□□□□ -1.33
NHLRC3-202ENST00000379600 A8MTW9 85 aa6.76□□□□□ -1.33
NHLRC3-202ENST00000379600 TIMM17BO60830 172 aa6.76□□□□□ -1.33
NHLRC3-202ENST00000379600 DEFB112Q30KQ8 113 aa6.76□□□□□ -1.33
NHLRC3-202ENST00000379600 HOXD3P31249 432 aaPredicted RBP6.76□□□□□ -1.33
NHLRC3-202ENST00000379600 SPTBN4Q9H254 2564 aa6.76□□□□□ -1.33
NHLRC3-202ENST00000379600 NDUFA1O15239 70 aa6.75□□□□□ -1.33
NHLRC3-202ENST00000379600 SOSTDC1Q6X4U4 206 aa6.75□□□□□ -1.33
NHLRC3-202ENST00000379600 Q8N2B8 174 aa6.75□□□□□ -1.33
NHLRC3-202ENST00000379600 C11orf72Q8NBR9 251 aa6.75□□□□□ -1.33
NHLRC3-202ENST00000379600 CCL19Q99731 98 aa6.75□□□□□ -1.33
NHLRC3-202ENST00000379600 NBPF19A0A087WUL8 3843 aa6.75□□□□□ -1.33
NHLRC3-202ENST00000379600 FAM240AA0A1B0GVK7 77 aa6.75□□□□□ -1.33
NHLRC3-202ENST00000379600 GNLYP22749 145 aa6.75□□□□□ -1.33
NHLRC3-202ENST00000379600 C18orf65Q6ZTR6 163 aa6.75□□□□□ -1.33
NHLRC3-202ENST00000379600 IGHV3OR16-12A0A075B7B8 117 aa6.74□□□□□ -1.33
NHLRC3-202ENST00000379600 COX6CP09669 75 aa6.74□□□□□ -1.33
NHLRC3-202ENST00000379600 DEFB131AP59861 70 aa6.74□□□□□ -1.33
NHLRC3-202ENST00000379600 LINC00308Q8TCZ7 52 aa6.74□□□□□ -1.33
NHLRC3-202ENST00000379600 C22orf24Q9Y442 160 aa6.74□□□□□ -1.33
NHLRC3-202ENST00000379600 NDUFA7O95182 113 aa6.74□□□□□ -1.33
NHLRC3-202ENST00000379600 IGLV5-39A0A0G2JS06 123 aa6.73□□□□□ -1.33
NHLRC3-202ENST00000379600 TMEM89A2RUT3 159 aa6.73□□□□□ -1.33
NHLRC3-202ENST00000379600 MRPL23Q16540 153 aaKnown RBP6.73□□□□□ -1.33
NHLRC3-202ENST00000379600 SMCR5Q8TEV8 140 aa6.73□□□□□ -1.33
NHLRC3-202ENST00000379600 YAE1D1Q9NRH1 226 aa6.73□□□□□ -1.33
NHLRC3-202ENST00000379600 IGHV3-53P01767 116 aa6.73□□□□□ -1.33
NHLRC3-202ENST00000379600 TIRAPP58753 221 aa6.73□□□□□ -1.33
NHLRC3-202ENST00000379600 BEAN1Q3B7T3 259 aa6.73□□□□□ -1.33
NHLRC3-202ENST00000379600 CHCHD5Q9BSY4 110 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms