RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 TMEM263Q8WUH6 116 aaKnown RBP7.59□□□□□ -1.19
POLR2J3-201ENST00000379340 CHAC1Q9BUX1 264 aa7.59□□□□□ -1.19
POLR2J3-201ENST00000379340 CST9LQ9H4G1 147 aa7.59□□□□□ -1.19
POLR2J3-201ENST00000379340 PYGO1Q9Y3Y4 419 aa7.59□□□□□ -1.19
POLR2J3-201ENST00000379340 SORL1Q92673 2214 aa7.59□□□□□ -1.19
POLR2J3-201ENST00000379340 C11orf86A6NJI1 115 aa7.59□□□□□ -1.2
POLR2J3-201ENST00000379340 H3BRM9 83 aa7.59□□□□□ -1.2
POLR2J3-201ENST00000379340 P0DMU3 169 aa7.59□□□□□ -1.2
POLR2J3-201ENST00000379340 FAM231AP0DMU4 169 aa7.59□□□□□ -1.2
POLR2J3-201ENST00000379340 FAM231CP0DMU5 169 aa7.59□□□□□ -1.2
POLR2J3-201ENST00000379340 IGLV4-69A0A075B6H9 119 aa7.58□□□□□ -1.2
POLR2J3-201ENST00000379340 TRAV8-6A0A0B4J262 113 aa7.58□□□□□ -1.2
POLR2J3-201ENST00000379340 MYMXA0A1B0GTQ4 84 aa7.58□□□□□ -1.2
POLR2J3-201ENST00000379340 NFE4Q86UQ8 179 aa7.58□□□□□ -1.2
POLR2J3-201ENST00000379340 RNASE8Q8TDE3 154 aaKnown RBP7.58□□□□□ -1.2
POLR2J3-201ENST00000379340 MRPL16Q9NX20 251 aaKnown RBP7.58□□□□□ -1.2
POLR2J3-201ENST00000379340 PRKDCP78527 4128 aaKnown RBP7.57□□□□□ -1.2
POLR2J3-201ENST00000379340 IGHV3-73A0A0B4J1V6 119 aa7.57□□□□□ -1.2
POLR2J3-201ENST00000379340 CIDEAO60543 219 aa7.57□□□□□ -1.2
POLR2J3-201ENST00000379340 PF4P02776 101 aa7.57□□□□□ -1.2
POLR2J3-201ENST00000379340 UBE2V1Q13404 147 aa7.57□□□□□ -1.2
POLR2J3-201ENST00000379340 C16orf74Q96GX8 76 aa7.57□□□□□ -1.2
POLR2J3-201ENST00000379340 C19orf73Q9NVV2 129 aa7.57□□□□□ -1.2
POLR2J3-201ENST00000379340 NACAE9PAV3 2078 aa7.57□□□□□ -1.2
POLR2J3-201ENST00000379340 AZU1P20160 251 aa7.56□□□□□ -1.2
POLR2J3-201ENST00000379340 DAZ2Q13117 558 aaKnown RBP7.56□□□□□ -1.2
POLR2J3-201ENST00000379340 VAMP3Q15836 100 aa7.56□□□□□ -1.2
POLR2J3-201ENST00000379340 OR4C5Q8NGB2 326 aa7.56□□□□□ -1.2
POLR2J3-201ENST00000379340 PRADC1Q9BSG0 188 aa7.56□□□□□ -1.2
POLR2J3-201ENST00000379340 TM2D2Q9BX73 214 aa7.56□□□□□ -1.2
POLR2J3-201ENST00000379340 TTTY13Q9BZ97 58 aa7.56□□□□□ -1.2
POLR2J3-201ENST00000379340 SPANXA1Q9NS26 97 aa7.56□□□□□ -1.2
POLR2J3-201ENST00000379340 IGHV3OR16-12A0A075B7B8 117 aa7.55□□□□□ -1.2
POLR2J3-201ENST00000379340 TRAV4A0A0B4J268 109 aa7.55□□□□□ -1.2
POLR2J3-201ENST00000379340 TRBV10-1A0A0K0K1A3 114 aa7.55□□□□□ -1.2
POLR2J3-201ENST00000379340 PRM2P04554 102 aa7.55□□□□□ -1.2
POLR2J3-201ENST00000379340 INSL3P51460 131 aa7.55□□□□□ -1.2
POLR2J3-201ENST00000379340 PTTG1IPP53801 180 aa7.55□□□□□ -1.2
POLR2J3-201ENST00000379340 CEND1Q8N111 149 aa7.55□□□□□ -1.2
POLR2J3-201ENST00000379340 MAPKAPK5-AS1Q8N8E1 139 aa7.55□□□□□ -1.2
POLR2J3-201ENST00000379340 LINC00482Q8N8I6 264 aa7.55□□□□□ -1.2
POLR2J3-201ENST00000379340 IGLV4-3A0A075B6K6 122 aa7.54□□□□□ -1.2
POLR2J3-201ENST00000379340 TRGV1A0A0A0MS02 117 aa7.54□□□□□ -1.2
POLR2J3-201ENST00000379340 C9orf118A6NHY6 69 aa7.54□□□□□ -1.2
POLR2J3-201ENST00000379340 SMIM13P0DJ93 91 aa7.54□□□□□ -1.2
POLR2J3-201ENST00000379340 GCSHP23434 173 aa7.54□□□□□ -1.2
POLR2J3-201ENST00000379340 COTL1Q14019 142 aa7.54□□□□□ -1.2
POLR2J3-201ENST00000379340 Q6ZVH6 145 aa7.54□□□□□ -1.2
POLR2J3-201ENST00000379340 VCX2Q9H322 139 aa7.54□□□□□ -1.2
POLR2J3-201ENST00000379340 KRTAP10-3P60369 221 aa7.54□□□□□ -1.2
POLR2J3-201ENST00000379340 Q6ZSN1 163 aa7.54□□□□□ -1.2
POLR2J3-201ENST00000379340 AMELXQ99217 191 aa7.54□□□□□ -1.2
POLR2J3-201ENST00000379340 ZNF815PA8K554 130 aa7.53□□□□□ -1.2
POLR2J3-201ENST00000379340 K7EQD1 137 aa7.53□□□□□ -1.2
POLR2J3-201ENST00000379340 GIG44P09565 113 aaPredicted RBP7.53□□□□□ -1.2
POLR2J3-201ENST00000379340 SMAGPQ0VAQ4 97 aa7.53□□□□□ -1.2
POLR2J3-201ENST00000379340 TMEM170BQ5T4T1 132 aa7.53□□□□□ -1.2
POLR2J3-201ENST00000379340 ZNRF2Q8NHG8 242 aa7.53□□□□□ -1.2
POLR2J3-201ENST00000379340 DEFB104AQ8WTQ1 72 aa7.53□□□□□ -1.2
POLR2J3-201ENST00000379340 CHCHD7Q9BUK0 85 aa7.53□□□□□ -1.2
POLR2J3-201ENST00000379340 TIMM21Q9BVV7 248 aa7.53□□□□□ -1.2
POLR2J3-201ENST00000379340 TRBV7-3A0A075B6L6 115 aa7.52□□□□□ -1.21
POLR2J3-201ENST00000379340 FXYD2P54710 66 aa7.52□□□□□ -1.21
POLR2J3-201ENST00000379340 RPL36AP83881 106 aaKnown RBP7.52□□□□□ -1.21
POLR2J3-201ENST00000379340 RRN3P1Q2M238 152 aa7.52□□□□□ -1.21
POLR2J3-201ENST00000379340 C9orf66Q5T8R8 295 aa7.52□□□□□ -1.21
POLR2J3-201ENST00000379340 CSNK1G2-AS1Q8NCQ2 148 aa7.52□□□□□ -1.21
POLR2J3-201ENST00000379340 RPL36ALQ969Q0 106 aaKnown RBP7.52□□□□□ -1.21
POLR2J3-201ENST00000379340 HIST1H4GQ99525 98 aa7.52□□□□□ -1.21
POLR2J3-201ENST00000379340 OVOL2Q9BRP0 275 aa7.52□□□□□ -1.21
POLR2J3-201ENST00000379340 TMEM223A0PJW6 202 aa7.51□□□□□ -1.21
POLR2J3-201ENST00000379340 LEPROTO15243 131 aa7.51□□□□□ -1.21
POLR2J3-201ENST00000379340 CCL25O15444 150 aa7.51□□□□□ -1.21
POLR2J3-201ENST00000379340 RPL35AP18077 110 aaKnown RBP7.51□□□□□ -1.21
POLR2J3-201ENST00000379340 MRPS36P82909 103 aaKnown RBP7.51□□□□□ -1.21
POLR2J3-201ENST00000379340 SCGB1D4Q6XE38 83 aa7.51□□□□□ -1.21
POLR2J3-201ENST00000379340 DAZ4Q86SG3 579 aaKnown RBP7.51□□□□□ -1.21
POLR2J3-201ENST00000379340 PLEKHB2Q96CS7 222 aa7.51□□□□□ -1.21
POLR2J3-201ENST00000379340 DAZ3Q9NR90 486 aaKnown RBP7.51□□□□□ -1.21
POLR2J3-201ENST00000379340 UBE2D4Q9Y2X8 147 aa7.51□□□□□ -1.21
POLR2J3-201ENST00000379340 ZNF22P17026 224 aaPredicted RBP7.5□□□□□ -1.21
POLR2J3-201ENST00000379340 LGALS3P17931 250 aaKnown RBP7.5□□□□□ -1.21
POLR2J3-201ENST00000379340 EMP1P54849 157 aa7.5□□□□□ -1.21
POLR2J3-201ENST00000379340 AMMECR1LQ6DCA0 310 aa7.5□□□□□ -1.21
POLR2J3-201ENST00000379340 Q6ZTI0 123 aa7.5□□□□□ -1.21
POLR2J3-201ENST00000379340 GTF2H5Q6ZYL4 71 aa7.5□□□□□ -1.21
POLR2J3-201ENST00000379340 ZNF479Q96JC4 524 aa7.5□□□□□ -1.21
POLR2J3-201ENST00000379340 OPRPNQ99935 248 aaPredicted RBP7.5□□□□□ -1.21
POLR2J3-201ENST00000379340 WFDC10AQ9H1F0 79 aa7.5□□□□□ -1.21
POLR2J3-201ENST00000379340 SPANXB1Q9NS25 103 aaPredicted RBP7.5□□□□□ -1.21
POLR2J3-201ENST00000379340 WNK1Q9H4A3 2382 aa7.5□□□□□ -1.21
POLR2J3-201ENST00000379340 TMEM238LA0A1B0GVL6 79 aa7.5□□□□□ -1.21
POLR2J3-201ENST00000379340 PLAC8L1A1L4L8 177 aa7.5□□□□□ -1.21
POLR2J3-201ENST00000379340 A6NJY4 79 aa7.5□□□□□ -1.21
POLR2J3-201ENST00000379340 J3QQQ9 107 aa7.5□□□□□ -1.21
POLR2J3-201ENST00000379340 NOP10Q9NPE3 64 aaKnown RBP7.5□□□□□ -1.21
POLR2J3-201ENST00000379340 A0A0J9YXV3 536 aa7.49□□□□□ -1.21
POLR2J3-201ENST00000379340 TINCRA0A1B0GVN0 87 aa7.49□□□□□ -1.21
POLR2J3-201ENST00000379340 TRBV6-4A0A1B0GX49 114 aa7.49□□□□□ -1.21
POLR2J3-201ENST00000379340 H3BUT2 72 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms