RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.88□□□□□ -0.03
CLN5-201ENST00000377453 IGKV2-29A2NJV5 120 aaPredicted RBP14.88□□□□□ -0.03
CLN5-201ENST00000377453 CDIP1Q9H305 208 aa14.88□□□□□ -0.03
CLN5-201ENST00000377453 CHD6Q8TD26 2715 aa14.87□□□□□ -0.03
CLN5-201ENST00000377453 KHDC1LQ5JSQ8 128 aa14.87□□□□□ -0.03
CLN5-201ENST00000377453 A0A096LNT2 108 aa14.87□□□□□ -0.03
CLN5-201ENST00000377453 Q6ZSV7 163 aa14.86□□□□□ -0.03
CLN5-201ENST00000377453 VPREB3Q9UKI3 123 aa14.86□□□□□ -0.03
CLN5-201ENST00000377453 TRGV11A0A075B6L2 103 aa14.86□□□□□ -0.03
CLN5-201ENST00000377453 IGHV3-30-3P0DP02 117 aa14.86□□□□□ -0.03
CLN5-201ENST00000377453 NOTCH3Q9UM47 2321 aa14.86□□□□□ -0.03
CLN5-201ENST00000377453 A0A0J9YXY3 114 aa14.85□□□□□ -0.03
CLN5-201ENST00000377453 TMEM61Q8N0U2 210 aa14.85□□□□□ -0.03
CLN5-201ENST00000377453 ANKRD29Q8N6D5 301 aa14.85□□□□□ -0.03
CLN5-201ENST00000377453 TMEM263Q8WUH6 116 aaKnown RBP14.85□□□□□ -0.03
CLN5-201ENST00000377453 SONP18583 2426 aaKnown RBP14.85□□□□□ -0.03
CLN5-201ENST00000377453 IGHV3-33P01772 117 aa14.84□□□□□ -0.03
CLN5-201ENST00000377453 MT-ATP8P03928 68 aa14.84□□□□□ -0.03
CLN5-201ENST00000377453 NAV2Q8IVL1 2488 aa14.84□□□□□ -0.03
CLN5-201ENST00000377453 AKAP9Q99996 3911 aa14.84□□□□□ -0.03
CLN5-201ENST00000377453 WNK1Q9H4A3 2382 aa14.83□□□□□ -0.03
CLN5-201ENST00000377453 SPINK8P0C7L1 97 aa14.83□□□□□ -0.03
CLN5-201ENST00000377453 Q1RN00 199 aa14.83□□□□□ -0.03
CLN5-201ENST00000377453 H3BMM0 161 aa14.83□□□□□ -0.04
CLN5-201ENST00000377453 PRSS2P07478 247 aa14.83□□□□□ -0.04
CLN5-201ENST00000377453 ADAMTSL4-AS1Q5T5F5 129 aa14.83□□□□□ -0.04
CLN5-201ENST00000377453 TNFRSF18Q9Y5U5 241 aa14.83□□□□□ -0.04
CLN5-201ENST00000377453 PRRC2AP48634 2157 aaKnown RBP14.83□□□□□ -0.04
CLN5-201ENST00000377453 C9JAW5 83 aa14.82□□□□□ -0.04
CLN5-201ENST00000377453 KRTAP10-9P60411 292 aa14.82□□□□□ -0.04
CLN5-201ENST00000377453 ZNF843Q8N446 348 aa14.82□□□□□ -0.04
CLN5-201ENST00000377453 UBE2E2Q96LR5 201 aa14.82□□□□□ -0.04
CLN5-201ENST00000377453 TIMM21Q9BVV7 248 aa14.82□□□□□ -0.04
CLN5-201ENST00000377453 GATA3P23771 443 aa14.81□□□□□ -0.04
CLN5-201ENST00000377453 XGP55808 180 aa14.81□□□□□ -0.04
CLN5-201ENST00000377453 Q6ZUT4 128 aa14.81□□□□□ -0.04
CLN5-201ENST00000377453 TEN1Q86WV5 123 aa14.81□□□□□ -0.04
CLN5-201ENST00000377453 A8MWV9 139 aa14.8□□□□□ -0.04
CLN5-201ENST00000377453 C11orf44Q8N8P7 122 aa14.8□□□□□ -0.04
CLN5-201ENST00000377453 LINC00467Q9BRT7 94 aa14.8□□□□□ -0.04
CLN5-201ENST00000377453 ERG28Q9UKR5 140 aa14.8□□□□□ -0.04
CLN5-201ENST00000377453 TENM4Q6N022 2769 aa14.8□□□□□ -0.04
CLN5-201ENST00000377453 M0R2P5 195 aa14.8□□□□□ -0.04
CLN5-201ENST00000377453 DAND5Q8N907 189 aa14.8□□□□□ -0.04
CLN5-201ENST00000377453 IGHV3OR16-12A0A075B7B8 117 aa14.79□□□□□ -0.04
CLN5-201ENST00000377453 Q6YL49 198 aa14.79□□□□□ -0.04
CLN5-201ENST00000377453 LITAFQ99732 161 aa14.79□□□□□ -0.04
CLN5-201ENST00000377453 CHCHD7Q9BUK0 85 aa14.79□□□□□ -0.04
CLN5-201ENST00000377453 ATP6V0E2Q8NHE4 81 aa14.79□□□□□ -0.04
CLN5-201ENST00000377453 LINC01587Q99440 93 aa14.79□□□□□ -0.04
CLN5-201ENST00000377453 C2CD3Q4AC94 2353 aa14.79□□□□□ -0.04
CLN5-201ENST00000377453 PPDPFLQ8WWR9 84 aa14.79□□□□□ -0.04
CLN5-201ENST00000377453 SETD2Q9BYW2 2564 aaPredicted RBP14.78□□□□□ -0.04
CLN5-201ENST00000377453 TMEM89A2RUT3 159 aa14.78□□□□□ -0.04
CLN5-201ENST00000377453 LYRM7Q5U5X0 104 aa14.78□□□□□ -0.04
CLN5-201ENST00000377453 CCDC168Q8NDH2 2452 aa14.78□□□□□ -0.04
CLN5-201ENST00000377453 SLC25A20O43772 301 aa14.77□□□□□ -0.04
CLN5-201ENST00000377453 APCP25054 2843 aa14.77□□□□□ -0.05
CLN5-201ENST00000377453 TRBV20-1A0A075B6N2 111 aa14.77□□□□□ -0.05
CLN5-201ENST00000377453 IGHV4-31P0DP07 118 aa14.77□□□□□ -0.05
CLN5-201ENST00000377453 MRPS36P82909 103 aaKnown RBP14.77□□□□□ -0.05
CLN5-201ENST00000377453 NDUFA12Q9UI09 145 aa14.77□□□□□ -0.05
CLN5-201ENST00000377453 MAP6D1Q9H9H5 199 aa14.76□□□□□ -0.05
CLN5-201ENST00000377453 UBE2D4Q9Y2X8 147 aa14.76□□□□□ -0.05
CLN5-201ENST00000377453 NIPBLQ6KC79 2804 aaeCLIP14.76□□□□□ -0.05
CLN5-201ENST00000377453 XCL2Q9UBD3 114 aa14.76□□□□□ -0.05
CLN5-201ENST00000377453 NF1P21359 2839 aa14.76□□□□□ -0.05
CLN5-201ENST00000377453 DSCR9P59020 149 aa14.75□□□□□ -0.05
CLN5-201ENST00000377453 SBSPONQ8IVN8 264 aa14.75□□□□□ -0.05
CLN5-201ENST00000377453 TRIAP1O43715 76 aa14.75□□□□□ -0.05
CLN5-201ENST00000377453 SCGB1A1P11684 91 aa14.75□□□□□ -0.05
CLN5-201ENST00000377453 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.75□□□□□ -0.05
CLN5-201ENST00000377453 A0A0U1RRA0 63 aa14.74□□□□□ -0.05
CLN5-201ENST00000377453 NDUFA7O95182 113 aa14.74□□□□□ -0.05
CLN5-201ENST00000377453 A0A0B4J2C4 111 aa14.73□□□□□ -0.05
CLN5-201ENST00000377453 IGHV1-58A0A0C4DH39 117 aa14.73□□□□□ -0.05
CLN5-201ENST00000377453 ZNF415Q09FC8 603 aa14.73□□□□□ -0.05
CLN5-201ENST00000377453 C11orf72Q8NBR9 251 aa14.73□□□□□ -0.05
CLN5-201ENST00000377453 PYGO1Q9Y3Y4 419 aa14.73□□□□□ -0.05
CLN5-201ENST00000377453 A0A1W2PRX2 142 aa14.73□□□□□ -0.05
CLN5-201ENST00000377453 IGHV3-53P01767 116 aa14.73□□□□□ -0.05
CLN5-201ENST00000377453 DYNLRB2Q8TF09 96 aa14.73□□□□□ -0.05
CLN5-201ENST00000377453 CDKN2A-AS1Q9UH64 79 aa14.72□□□□□ -0.05
CLN5-201ENST00000377453 CR1P17927 2039 aa14.72□□□□□ -0.05
CLN5-201ENST00000377453 CKS1BP61024 79 aa14.72□□□□□ -0.05
CLN5-201ENST00000377453 NTN5Q8WTR8 489 aaPredicted RBP14.72□□□□□ -0.05
CLN5-201ENST00000377453 ZNF625Q96I27 306 aaPredicted RBP14.72□□□□□ -0.05
CLN5-201ENST00000377453 VSIG2Q96IQ7 327 aa14.72□□□□□ -0.05
CLN5-201ENST00000377453 FSHBP01225 129 aa14.71□□□□□ -0.05
CLN5-201ENST00000377453 CRYBA4P53673 196 aa14.71□□□□□ -0.05
CLN5-201ENST00000377453 RNF152Q8N8N0 203 aa14.71□□□□□ -0.05
CLN5-201ENST00000377453 JMJD1CQ15652 2540 aa14.71□□□□□ -0.05
CLN5-201ENST00000377453 J3QLI3 93 aa14.71□□□□□ -0.06
CLN5-201ENST00000377453 COX6A2Q02221 97 aa14.7□□□□□ -0.06
CLN5-201ENST00000377453 HIST2H2BCQ6DN03 193 aa14.7□□□□□ -0.06
CLN5-201ENST00000377453 Q5PR19 223 aa14.7□□□□□ -0.06
CLN5-201ENST00000377453 CLEC2BQ92478 149 aa14.69□□□□□ -0.06
CLN5-201ENST00000377453 GEMIN7Q9H840 131 aaKnown RBP14.69□□□□□ -0.06
CLN5-201ENST00000377453 LINC00694P0DN24 101 aa14.68□□□□□ -0.06
CLN5-201ENST00000377453 LINC01620Q4KN68 170 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms